| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Carubv10028584m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | no data | no data | 0.26 | 3 | 6 | 1 | 0 | 33.33% | 0.00% | 9 | 1 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10028584m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | no data | 5.24 x 10-20 | 0 | 24 | 68 | 15 | 0.00% | 18.07% | 24 | 83 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10028395m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | PEG | 0.0 | 16 | 45 | 218 | 27 | 26.23% | 11.02% | 61 | 245 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency PEG' |
||||
| Carubv10028395m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | PEG | PEG | 8.9 x 10-11 | 6 | 33 | 23 | 0 | 15.38% | 0.00% | 39 | 23 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency PEG' |
||||
| Carubv10028225m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | mat bias | MEG | 6.32 x 10-14 | 107 | 16 | 6 | 148 | 86.99% | 96.10% | 123 | 154 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10028225m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 3.49 x 10-8 | 30 | 3 | 3 | 82 | 90.91% | 96.47% | 33 | 85 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10028170m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 0.0 | 503 | 3 | 2 | 443 | 99.41% | 99.55% | 506 | 445 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10028170m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 0.0 | 1552 | 13 | 4 | 1391 | 99.17% | 99.71% | 1565 | 1395 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10028088m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | PEG | 0.0 | 172 | 594 | 493 | 172 | 22.45% | 25.86% | 766 | 665 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency PEG' |
||||
| Carubv10028088m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | PEG | PEG | 0.0 | 267 | 721 | 633 | 178 | 27.02% | 21.95% | 988 | 811 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency PEG' |
||||
| Carubv10028086m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | no data | 7.32 x 10-4 | 1 | 21 | 17 | 8 | 4.55% | 32.00% | 22 | 25 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10028086m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | no data | no data | 0 | 8 | 0 | 0 | 0.00% | 8 | 0 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||||
| Carubv10028076m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | not imprinted | 1.21 x 10-23 | 153 | 15 | 1 | 215 | 91.07% | 99.54% | 168 | 216 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10028076m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | no data | not imprinted | 0.0 | 0 | 0 | 8 | 95 | 92.23% | 0 | 103 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
|||||
| Carubv10027954m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | no data | 1.07 x 10-7 | 45 | 0 | 2 | 72 | 100.00% | 97.30% | 45 | 74 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10027954m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | no data | no data | 0.43 | 14 | 0 | 0 | 2 | 100.00% | 100.00% | 14 | 2 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10027944m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 2.48 x 10-18 | 155 | 81 | 69 | 19 | 65.68% | 21.59% | 236 | 88 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10027944m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 59 | 17 | 53 | 27 | 77.63% | 33.75% | 76 | 80 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10027876m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | PEG | PEG | 1.75 x 10-9 | 3 | 22 | 20 | 0 | 12.00% | 0.00% | 25 | 20 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency PEG' |
||||
| Carubv10027876m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | PEG | 0.0 | 0 | 44 | 133 | 33 | 0.00% | 19.88% | 44 | 166 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency PEG' |
||||
| Carubv10027823m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | PEG | 0.0 | 5 | 55 | 157 | 31 | 8.33% | 16.49% | 60 | 188 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency PEG' |
||||
| Carubv10027823m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | PEG | PEG | 7.84 x 10-12 | 4 | 38 | 34 | 5 | 9.52% | 12.82% | 42 | 39 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency PEG' |
||||
| Carubv10027802m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 1.748 x 10-4 | 100 | 64 | 41 | 164 | 60.98% | 80.00% | 164 | 205 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10027802m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 120 | 58 | 13 | 294 | 67.42% | 95.77% | 178 | 307 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10027714m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | PEG | 0.0 | 0 | 21 | 137 | 21 | 0.00% | 13.29% | 21 | 158 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency PEG' |
||||
| Carubv10027714m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | no data | PEG | 7.79 x 10-6 | 0 | 13 | 15 | 2 | 0.00% | 11.76% | 13 | 17 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency PEG' |
||||
| Carubv10027700m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | PEG | 0.0 | 9 | 75 | 223 | 25 | 10.71% | 10.08% | 84 | 248 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency PEG' |
||||
| Carubv10027700m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | no data | PEG | 3.45 x 10-8 | 4 | 22 | 17 | 0 | 15.38% | 0.00% | 26 | 17 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency PEG' |
||||
| Carubv10027667m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | PEG | 1.0 x 10-30 | 14 | 200 | 140 | 51 | 6.54% | 26.70% | 214 | 191 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency PEG' |
||||
| Carubv10027667m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | PEG | PEG | 1.08 x 10-23 | 26 | 89 | 122 | 52 | 22.61% | 29.89% | 115 | 174 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency PEG' |
||||
| Carubv10027549m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 1.76 x 10-13 | 188 | 3 | 12 | 170 | 98.43% | 93.41% | 191 | 182 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10027549m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 0.0 | 359 | 13 | 2 | 369 | 96.51% | 99.46% | 372 | 371 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10027299m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | no data | 0.0 | 36 | 0 | 0 | 39 | 100.00% | 100.00% | 36 | 39 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10027299m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | no data | 1.0 | 2 | 2 | 4 | 8 | 50.00% | 66.67% | 4 | 12 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10027273m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | PEG | 0.0 | 762 | 3729 | 5529 | 2700 | 16.97% | 32.81% | 4491 | 8229 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency PEG' |
||||
| Carubv10027273m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | PEG | PEG | 0.0 | 315 | 1556 | 683 | 177 | 16.84% | 20.58% | 1871 | 860 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency PEG' |
||||
| Carubv10027265m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 3.67 x 10-7 | 30 | 38 | 2 | 67 | 44.12% | 97.10% | 68 | 69 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10027265m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 33 | 14 | 15 | 197 | 70.21% | 92.92% | 47 | 212 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10027171m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | no data | 0.0 | 482 | 0 | 0 | 171 | 100.00% | 100.00% | 482 | 171 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10027171m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | no data | 6 | 0 | 0 | 0 | 100.00% | 6 | 0 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||||
| Carubv10026913m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | not imprinted | 6.837826 x 10-1 | 5 | 10 | 9 | 22 | 33.33% | 70.97% | 15 | 31 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10026913m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | not imprinted | 0.0 | 23 | 0 | 0 | 110 | 100.00% | 100.00% | 23 | 110 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10026908m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 6.35 x 10-5 | 67 | 0 | 6 | 63 | 100.00% | 91.30% | 67 | 69 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10026908m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | mat bias | MEG | 1.36272 x 10-2 | 30 | 1 | 6 | 38 | 96.77% | 86.36% | 31 | 44 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10026779m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 7.76 x 10-27 | 44 | 6 | 14 | 304 | 88.00% | 95.60% | 50 | 318 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10026779m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.05 | 37 | 3 | 43 | 129 | 92.50% | 75.00% | 40 | 172 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10026752m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 3.26 x 10-7 | 51 | 2 | 0 | 58 | 96.23% | 100.00% | 53 | 58 | C. rubella v.1.0 |
Sanger Validation?: 'Consistent' Overall status: 'High stringency MEG' |
||||
| Carubv10026752m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 1.18 x 10-14 | 20 | 0 | 0 | 128 | 100.00% | 100.00% | 20 | 128 | C. rubella v.1.0 |
Sanger Validation?: 'Consistent' Overall status: 'High stringency MEG' |
||||
| Carubv10026740m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | not imprinted | 0.01 | 78 | 5 | 3 | 30 | 93.98% | 90.91% | 83 | 33 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10026740m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 7.449079 x 10-1 | 26 | 11 | 10 | 17 | 70.27% | 62.96% | 37 | 27 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10026739m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | not imprinted | 6.42 x 10-11 | 6 | 24 | 33 | 6 | 20.00% | 15.38% | 30 | 39 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10026739m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.45 | 10 | 15 | 14 | 38 | 40.00% | 73.08% | 25 | 52 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10026722m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 59 | 25 | 10 | 85 | 70.24% | 89.47% | 84 | 95 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10026722m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 3.498 x 10-4 | 38 | 41 | 21 | 103 | 48.10% | 83.06% | 79 | 124 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10026494m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 2.2 x 10-29 | 106 | 0 | 0 | 263 | 100.00% | 100.00% | 106 | 263 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10026494m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 0.0 | 507 | 1 | 1 | 779 | 99.80% | 99.87% | 508 | 780 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10026429m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | no data | PEG | 2.962 x 10-3 | 20 | 43 | 10 | 3 | 31.75% | 23.08% | 63 | 13 | C. rubella v.1.0 |
Sanger Validation?: 'Consistent' Overall status: 'Relaxed stringency PEG' |
||||
| Carubv10026429m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | PEG | 0.0 | 7 | 94 | 196 | 42 | 6.93% | 17.65% | 101 | 238 | C. rubella v.1.0 |
Sanger Validation?: 'Consistent' Overall status: 'Relaxed stringency PEG' |
||||
| Carubv10026377m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | mat bias | MEG | 5.2 x 10-29 | 1386 | 206 | 205 | 962 | 87.06% | 82.43% | 1592 | 1167 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10026377m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 0.0 | 4413 | 418 | 368 | 3854 | 91.35% | 91.28% | 4831 | 4222 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10026235m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 55 | 23 | 8 | 129 | 70.51% | 94.16% | 78 | 137 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10026235m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 5.454119 x 10-1 | 32 | 31 | 20 | 49 | 50.79% | 71.01% | 63 | 69 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10026226m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 0.0 | 7405 | 778 | 722 | 6692 | 90.49% | 90.26% | 8183 | 7414 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10026226m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | mat bias | MEG | 5.54 x 10-21 | 3575 | 331 | 176 | 773 | 91.53% | 81.45% | 3906 | 949 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10026048m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | PEG | 1.09 x 10-12 | 20 | 67 | 64 | 28 | 22.99% | 30.43% | 87 | 92 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency PEG' |
||||
| Carubv10026048m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | pat bias | PEG | 1.14 x 10-7 | 13 | 8 | 39 | 18 | 61.90% | 31.58% | 21 | 57 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency PEG' |
||||
| Carubv10026004m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 4.79 x 10-21 | 1289 | 828 | 372 | 1302 | 60.89% | 77.78% | 2117 | 1674 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10026004m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 672 | 350 | 463 | 25 | 65.75% | 5.12% | 1022 | 488 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10025982m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 100 | 55 | 96 | 339 | 64.52% | 77.93% | 155 | 435 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10025982m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 4.71 x 10-11 | 149 | 60 | 14 | 153 | 71.29% | 91.62% | 209 | 167 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10025779m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 1.22 x 10-11 | 63 | 23 | 0 | 99 | 73.26% | 100.00% | 86 | 99 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10025779m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.07 | 138 | 59 | 47 | 136 | 70.05% | 74.32% | 197 | 183 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10025508m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | no data | 0.59 | 53 | 0 | 11 | 28 | 100.00% | 71.79% | 53 | 39 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10025508m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | no data | 1 | 8 | 0 | 0 | 11.11% | 9 | 0 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||||
| Carubv10025506m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 176 | 149 | 703 | 1831 | 54.15% | 72.26% | 325 | 2534 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10025506m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | not imprinted | 0.0 | 65 | 301 | 396 | 136 | 17.76% | 25.56% | 366 | 532 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10025446m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | no data | 0.0 | 23 | 0 | 1 | 26 | 100.00% | 96.30% | 23 | 27 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10025446m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | no data | 6.837826 x 10-1 | 1 | 0 | 2 | 6 | 100.00% | 75.00% | 1 | 8 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10025436m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | no data | no data | 0.0 | 0 | 7 | 8 | 0 | 0.00% | 0.00% | 7 | 8 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10025436m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | no data | 0.0 | 1 | 29 | 179 | 21 | 3.33% | 10.50% | 30 | 200 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10025355m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | no data | 0.0 | 307 | 0 | 1 | 198 | 100.00% | 99.50% | 307 | 199 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10025355m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | no data | 0 | 0 | 0 | 0 | 0 | 0 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
|||||||
| Carubv10025240m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | mat bias | MEG | 1.2 x 10-11 | 457 | 68 | 61 | 315 | 87.05% | 83.78% | 525 | 376 | C. rubella v.1.0 |
Sanger Validation?: 'Consistent' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10025240m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 0.0 | 567 | 53 | 64 | 1025 | 91.45% | 94.12% | 620 | 1089 | C. rubella v.1.0 |
Sanger Validation?: 'Consistent' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10025066m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 2.75 x 10-16 | 60 | 0 | 0 | 142 | 100.00% | 100.00% | 60 | 142 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10025066m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 0.0 | 3131 | 8 | 10 | 1738 | 99.75% | 99.43% | 3139 | 1748 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10025064m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | not imprinted | 6.05 x 10-9 | 51 | 0 | 0 | 74 | 100.00% | 100.00% | 51 | 74 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10025064m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.03 | 140 | 23 | 57 | 169 | 85.89% | 74.78% | 163 | 226 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10024897m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | no data | no data | 0.01 | 0 | 8 | 5 | 0 | 0.00% | 0.00% | 8 | 5 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10024897m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | no data | 0.0 | 6 | 19 | 84 | 0 | 24.00% | 0.00% | 25 | 84 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10024888m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 3.28 x 10-19 | 123 | 1 | 1 | 174 | 99.19% | 99.43% | 124 | 175 | C. rubella v.1.0 |
Sanger Validation?: 'Consistent' Overall status: 'High stringency MEG' |
||||
| Carubv10024888m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 7.03 x 10-8 | 91 | 0 | 1 | 70 | 100.00% | 98.59% | 91 | 71 | C. rubella v.1.0 |
Sanger Validation?: 'Consistent' Overall status: 'High stringency MEG' |
||||
| Carubv10024881m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 5.231187 x 10-1 | 19 | 36 | 24 | 39 | 34.55% | 61.90% | 55 | 63 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10024881m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.93 | 15 | 43 | 39 | 76 | 25.86% | 66.09% | 58 | 115 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10024654m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 4.216104 x 10-1 | 18 | 148 | 44 | 73 | 10.84% | 62.39% | 166 | 117 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10024654m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | no data | not imprinted | 0.43 | 9 | 11 | 0 | 2 | 45.00% | 100.00% | 20 | 2 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10024602m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | PEG | PEG | 1.26 x 10-6 | 0 | 21 | 25 | 8 | 0.00% | 24.24% | 21 | 33 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency PEG' |
||||
| Carubv10024602m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | PEG | 6.28901 x 10-2 | 2 | 16 | 8 | 5 | 11.11% | 38.46% | 18 | 13 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency PEG' |
||||
| Carubv10024582m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | PEG | 0.0 | 12 | 41 | 336 | 19 | 22.64% | 5.35% | 53 | 355 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency PEG' |
||||
| Carubv10024582m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | pat bias | PEG | 7.97 x 10-20 | 20 | 21 | 44 | 0 | 48.78% | 0.00% | 41 | 44 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency PEG' |