| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM5G899985 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.28 x 10-11 | 44 | 0 | 67 | 0 | 100.00% | 0.00% | 44 | 67 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.28e-11' χ2 p-value for Mo17 x B73: '2.72e-16' Biased in favor of strain: 'B73' |
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| GRMZM5G899985 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.5655 x 10-3 | 20 | 0 | 13 | 0 | 100.00% | 0.00% | 20 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0015655' χ2 p-value for Mo17 x B73: '3.41e-07' Biased in favor of strain: 'B73' |
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| GRMZM5G899800 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 2 | 3 | 5 | 60.00% | 62.50% | 5 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6547208' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM5G899800 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.838823 x 10-1 | 11 | 9 | 6 | 9 | 55.00% | 60.00% | 20 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2683709' χ2 p-value for Mo17 x B73: '.5838823' Biased in favor of strain: '' |
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| GRMZM5G899787 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.64 x 10-8 | 144 | 65 | 148 | 62 | 68.90% | 29.52% | 209 | 210 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.64e-08' χ2 p-value for Mo17 x B73: '2.95e-09' Biased in favor of strain: 'B73' |
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| GRMZM5G899787 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.168657 x 10-1 | 132 | 51 | 92 | 116 | 72.13% | 55.77% | 183 | 208 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1168657' χ2 p-value for Mo17 x B73: '.0008561' Biased in favor of strain: '' |
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| GRMZM5G899656 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.795001 x 10-1 | 60 | 68 | 60 | 72 | 46.88% | 54.55% | 128 | 132 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795001' χ2 p-value for Mo17 x B73: '.2962699' Biased in favor of strain: '' |
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| GRMZM5G899656 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.509675 x 10-1 | 13 | 9 | 8 | 31 | 59.09% | 79.49% | 22 | 39 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4509675' χ2 p-value for Mo17 x B73: '.0894294' Biased in favor of strain: '' |
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| GRMZM5G899512 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.316006 x 10-1 | 27 | 13 | 18 | 16 | 67.50% | 47.06% | 40 | 34 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0268567' χ2 p-value for Mo17 x B73: '.7316006' Biased in favor of strain: '' |
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| GRMZM5G899512 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.340949 x 10-1 | 19 | 11 | 14 | 25 | 63.33% | 64.10% | 30 | 39 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6985152' χ2 p-value for Mo17 x B73: '.7340949' Biased in favor of strain: '' |
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| GRMZM5G899428 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 4 | 3 | 2 | 20.00% | 40.00% | 5 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1797125' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: '' |
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| GRMZM5G899428 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 3 | 6 | 5 | 50.00% | 45.45% | 6 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3864683' χ2 p-value for Mo17 x B73: '.135593' Biased in favor of strain: '' |
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| GRMZM5G899349 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.233396 x 10-1 | 17 | 22 | 10 | 19 | 43.59% | 65.52% | 39 | 29 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4233396' χ2 p-value for Mo17 x B73: '.0946707' Biased in favor of strain: '' |
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| GRMZM5G899349 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.649149 x 10-1 | 20 | 5 | 4 | 17 | 80.00% | 80.95% | 25 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1573048' χ2 p-value for Mo17 x B73: '.1649149' Biased in favor of strain: '' |
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| GRMZM5G899308 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.18606 x 10-2 | 11 | 4 | 17 | 8 | 73.33% | 32.00% | 15 | 25 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0707011' χ2 p-value for Mo17 x B73: '.0718606' Biased in favor of strain: '' |
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| GRMZM5G899308 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 4 | 3 | 6 | 50.00% | 66.67% | 8 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173024' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: '' |
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| GRMZM5G899300 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.34 x 10-10 | 140 | 47 | 125 | 42 | 74.87% | 25.15% | 187 | 167 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.04e-11' χ2 p-value for Mo17 x B73: '1.34e-10' Biased in favor of strain: 'B73' |
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| GRMZM5G899300 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.197949 x 10-1 | 26 | 4 | 12 | 13 | 86.67% | 52.00% | 30 | 25 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0201377' χ2 p-value for Mo17 x B73: '.1197949' Biased in favor of strain: '' |
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| GRMZM5G899149 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 14 | 7 | 3 | 5 | 66.67% | 62.50% | 21 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1266305' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM5G899149 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.864275 x 10-1 | 9 | 2 | 2 | 12 | 81.82% | 85.71% | 11 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2864275' χ2 p-value for Mo17 x B73: '.1305701' Biased in favor of strain: '' |
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| GRMZM5G898915 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.992863 x 10-1 | 518 | 244 | 415 | 400 | 67.98% | 49.08% | 762 | 815 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.21e-23' χ2 p-value for Mo17 x B73: '.5992863' Biased in favor of strain: '' |
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| GRMZM5G898915 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.68 x 10-7 | 1266 | 485 | 835 | 976 | 72.30% | 53.89% | 1751 | 1811 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.68e-07' χ2 p-value for Mo17 x B73: '9.15e-31' Biased in favor of strain: 'B73' |
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| GRMZM5G898898 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.69 x 10-11 | 92 | 3 | 51 | 2 | 96.84% | 3.77% | 95 | 53 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.77e-20' χ2 p-value for Mo17 x B73: '1.69e-11' Biased in favor of strain: 'B73' |
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| GRMZM5G898898 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.22 x 10-3 | 37 | 5 | 32 | 14 | 88.10% | 30.43% | 42 | 46 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.00322' χ2 p-value for Mo17 x B73: '1.86e-07' Biased in favor of strain: 'B73' |
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| GRMZM5G898887 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.43 x 10-12 | 446 | 206 | 482 | 291 | 68.40% | 37.65% | 652 | 773 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.50e-21' χ2 p-value for Mo17 x B73: '6.43e-12' Biased in favor of strain: 'B73' |
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| GRMZM5G898887 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.999735 x 10-1 | 22 | 11 | 5 | 43 | 66.67% | 89.58% | 33 | 48 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9999735' χ2 p-value for Mo17 x B73: '.000757' Biased in favor of strain: '' |
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| GRMZM5G898867 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.61 x 10-9 | 591 | 401 | 672 | 450 | 59.58% | 40.11% | 992 | 1122 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.61e-09' χ2 p-value for Mo17 x B73: '3.41e-11' Biased in favor of strain: 'B73' |
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| GRMZM5G898867 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.7917 x 10-3 | 169 | 53 | 95 | 86 | 76.13% | 47.51% | 222 | 181 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0027917' χ2 p-value for Mo17 x B73: '4.60e-08' Biased in favor of strain: 'B73' |
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| GRMZM5G898755 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1637 | 147 | 2042 | 216 | 91.76% | 9.57% | 1784 | 2258 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G898755 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | maternally biased | 4.653 x 10-4 | 797 | 2 | 5 | 45 | 99.75% | 90.00% | 799 | 50 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '.0004653' Biased in favor of strain: '' |
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| GRMZM5G898740 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.8274 x 10-3 | 694 | 497 | 814 | 693 | 58.27% | 45.99% | 1191 | 1507 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.14e-08' χ2 p-value for Mo17 x B73: '.0018274' Biased in favor of strain: 'B73' |
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| GRMZM5G898740 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 2276 | 457 | 1192 | 782 | 83.28% | 39.61% | 2733 | 1974 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G898735 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.07011 x 10-2 | 164 | 89 | 78 | 57 | 64.82% | 42.22% | 253 | 135 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.41e-06' χ2 p-value for Mo17 x B73: '.0707011' Biased in favor of strain: '' |
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| GRMZM5G898735 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.73 x 10-13 | 239 | 17 | 73 | 39 | 93.36% | 34.82% | 256 | 112 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.31e-19' χ2 p-value for Mo17 x B73: '8.73e-13' Biased in favor of strain: 'B73' |
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| GRMZM5G898684 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.08 x 10-10 | 1 | 80 | 5 | 55 | 1.23% | 91.67% | 81 | 60 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.67e-18' χ2 p-value for Mo17 x B73: '1.08e-10' Biased in favor of strain: 'Mo17' |
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| GRMZM5G898684 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G898471 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.1412 x 10-2 | 9 | 1 | 10 | 1 | 90.00% | 9.09% | 10 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.011412' χ2 p-value for Mo17 x B73: '.0066556' Biased in favor of strain: 'B73' |
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| GRMZM5G898471 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.291954 x 10-1 | 27 | 3 | 5 | 15 | 90.00% | 75.00% | 30 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0067066' χ2 p-value for Mo17 x B73: '.4291954' Biased in favor of strain: '' |
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| GRMZM5G898371 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 2 | 1 | 11 | 75.00% | 91.67% | 8 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.0038924' Biased in favor of strain: '' |
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| GRMZM5G898371 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.111 x 10-4 | 3 | 16 | 0 | 22 | 15.79% | 100.00% | 19 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.55e-06' χ2 p-value for Mo17 x B73: '.0009111' Biased in favor of strain: 'Mo17' |
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| GRMZM5G898290 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 3 | 3 | 3 | 70.00% | 50.00% | 10 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2059032' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM5G898290 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.711317 x 10-1 | 4 | 12 | 6 | 13 | 25.00% | 68.42% | 16 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0004069' χ2 p-value for Mo17 x B73: '.8711317' Biased in favor of strain: '' |
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| GRMZM5G897988 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 333 | 83 | 295 | 70 | 80.05% | 19.18% | 416 | 365 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.54e-34' χ2 p-value for Mo17 x B73: '5.13e-32' Biased in favor of strain: 'B73' |
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| GRMZM5G897988 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 970 | 64 | 634 | 28 | 93.81% | 4.23% | 1034 | 662 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G897980 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.0 x 10-22 | 294 | 61 | 267 | 85 | 82.82% | 24.15% | 355 | 352 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.97e-35' χ2 p-value for Mo17 x B73: '3.00e-22' Biased in favor of strain: 'B73' |
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| GRMZM5G897980 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.3458 x 10-3 | 141 | 40 | 92 | 94 | 77.90% | 50.54% | 181 | 186 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0013458' χ2 p-value for Mo17 x B73: '3.07e-06' Biased in favor of strain: 'B73' |
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| GRMZM5G897976 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.34 x 10-7 | 503 | 320 | 360 | 234 | 61.12% | 39.39% | 823 | 594 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.78e-10' χ2 p-value for Mo17 x B73: '2.34e-07' Biased in favor of strain: 'B73' |
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| GRMZM5G897976 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.797125 x 10-1 | 358 | 170 | 205 | 352 | 67.80% | 63.20% | 528 | 557 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5797125' χ2 p-value for Mo17 x B73: '.082256' Biased in favor of strain: '' |
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| GRMZM5G897958 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.309091 x 10-1 | 79 | 57 | 80 | 62 | 58.09% | 43.66% | 136 | 142 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0592297' χ2 p-value for Mo17 x B73: '.1309091' Biased in favor of strain: '' |
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| GRMZM5G897958 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.660899 x 10-1 | 87 | 30 | 44 | 79 | 74.36% | 64.23% | 117 | 123 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0775638' χ2 p-value for Mo17 x B73: '.5660899' Biased in favor of strain: '' |
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| GRMZM5G897944 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.467 x 10-4 | 20 | 2 | 19 | 3 | 90.91% | 13.64% | 22 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001242' χ2 p-value for Mo17 x B73: '.0006467' Biased in favor of strain: 'B73' |
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| GRMZM5G897944 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G897926 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.6443 x 10-3 | 308 | 221 | 260 | 193 | 58.22% | 42.60% | 529 | 453 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001552' χ2 p-value for Mo17 x B73: '.0016443' Biased in favor of strain: 'B73' |
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| GRMZM5G897926 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.24 x 10-26 | 724 | 141 | 286 | 223 | 83.70% | 43.81% | 865 | 509 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.24e-26' χ2 p-value for Mo17 x B73: '7.56e-28' Biased in favor of strain: 'B73' |
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| GRMZM5G897818 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.88145 x 10-2 | 268 | 186 | 205 | 167 | 59.03% | 44.89% | 454 | 372 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001189' χ2 p-value for Mo17 x B73: '.0488145' Biased in favor of strain: 'B73' |
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| GRMZM5G897818 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.544503 x 10-1 | 80 | 56 | 58 | 96 | 58.82% | 62.34% | 136 | 154 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0523376' χ2 p-value for Mo17 x B73: '.2544503' Biased in favor of strain: '' |
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| GRMZM5G897749 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 15 | 0 | 9 | 21.05% | 100.00% | 19 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0116169' χ2 p-value for Mo17 x B73: '.0026998' Biased in favor of strain: '' |
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| GRMZM5G897749 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 6 | 5 | 7 | 0.00% | 58.33% | 6 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000532' χ2 p-value for Mo17 x B73: '.5402912' Biased in favor of strain: '' |
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| GRMZM5G897673 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.946269 x 10-1 | 110 | 79 | 64 | 74 | 58.20% | 53.62% | 189 | 138 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0241385' χ2 p-value for Mo17 x B73: '.3946269' Biased in favor of strain: '' |
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| GRMZM5G897673 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.366019 x 10-1 | 16 | 29 | 17 | 39 | 35.56% | 69.64% | 45 | 56 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.54e-06' χ2 p-value for Mo17 x B73: '.6366019' Biased in favor of strain: '' |
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| GRMZM5G897604 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1986 | 756 | 1384 | 568 | 72.43% | 29.10% | 2742 | 1952 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G897604 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1810 | 493 | 1360 | 990 | 78.59% | 42.13% | 2303 | 2350 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.39e-34' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G897592 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 4 | 6 | 4 | 0.00% | 40.00% | 4 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.5270892' Biased in favor of strain: '' |
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| GRMZM5G897592 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 1 | 0 | 0 | 88.89% | 9 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G897546 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.26083 x 10-1 | 362 | 240 | 264 | 230 | 60.13% | 46.56% | 602 | 494 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.61e-07' χ2 p-value for Mo17 x B73: '.126083' Biased in favor of strain: '' |
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| GRMZM5G897546 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.32 x 10-6 | 573 | 194 | 343 | 440 | 74.71% | 56.19% | 767 | 783 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.32e-06' χ2 p-value for Mo17 x B73: '5.09e-10' Biased in favor of strain: 'B73' |
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| GRMZM5G897342 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.55 x 10-15 | 320 | 128 | 273 | 118 | 71.43% | 30.18% | 448 | 391 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.18e-19' χ2 p-value for Mo17 x B73: '4.55e-15' Biased in favor of strain: 'B73' |
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| GRMZM5G897342 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.7 x 10-16 | 705 | 181 | 398 | 287 | 79.57% | 41.90% | 886 | 685 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.70e-16' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G897067 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.56 x 10-12 | 630 | 408 | 1062 | 598 | 60.69% | 36.02% | 1038 | 1660 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.56e-12' χ2 p-value for Mo17 x B73: '4.78e-30' Biased in favor of strain: 'B73' |
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| GRMZM5G897067 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.27 x 10-20 | 17 | 93 | 4 | 187 | 15.45% | 97.91% | 110 | 191 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.48e-30' χ2 p-value for Mo17 x B73: '5.27e-20' Biased in favor of strain: 'Mo17' |
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| GRMZM5G896916 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.7374 x 10-3 | 131 | 75 | 115 | 78 | 63.59% | 40.41% | 206 | 193 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000955' χ2 p-value for Mo17 x B73: '.0077374' Biased in favor of strain: 'B73' |
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| GRMZM5G896916 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.630249 x 10-1 | 68 | 22 | 28 | 60 | 75.56% | 68.18% | 90 | 88 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0736445' χ2 p-value for Mo17 x B73: '.7630249' Biased in favor of strain: '' |
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| GRMZM5G896883 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.57768 x 10-2 | 21 | 8 | 22 | 8 | 72.41% | 26.67% | 29 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0157768' χ2 p-value for Mo17 x B73: '.0105871' Biased in favor of strain: 'B73' |
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| GRMZM5G896883 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.4368 x 10-3 | 23 | 1 | 11 | 0 | 95.83% | 0.00% | 24 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0024368' χ2 p-value for Mo17 x B73: '2.73e-06' Biased in favor of strain: 'B73' |
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| GRMZM5G896859 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.121 x 10-4 | 63 | 24 | 52 | 23 | 72.41% | 30.67% | 87 | 75 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000029' χ2 p-value for Mo17 x B73: '.0008121' Biased in favor of strain: 'B73' |
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| GRMZM5G896859 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 1 | 100.00% | 100.00% | 1 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM5G896834 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.860995 x 10-1 | 88 | 56 | 54 | 47 | 61.11% | 46.53% | 144 | 101 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0076608' χ2 p-value for Mo17 x B73: '.4860995' Biased in favor of strain: '' |
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| GRMZM5G896834 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.54661 x 10-1 | 108 | 49 | 41 | 87 | 68.79% | 67.97% | 157 | 128 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5725669' χ2 p-value for Mo17 x B73: '.754661' Biased in favor of strain: '' |
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| GRMZM5G896731 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 301 | 71 | 295 | 57 | 80.91% | 16.19% | 372 | 352 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.77e-33' χ2 p-value for Mo17 x B73: '7.12e-37' Biased in favor of strain: 'B73' |
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| GRMZM5G896731 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.64 x 10-16 | 272 | 34 | 148 | 90 | 88.89% | 37.82% | 306 | 238 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.64e-16' χ2 p-value for Mo17 x B73: '3.66e-21' Biased in favor of strain: 'B73' |
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| GRMZM5G896604 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.9049 x 10-2 | 13 | 4 | 11 | 2 | 76.47% | 15.38% | 17 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.029049' χ2 p-value for Mo17 x B73: '.0125549' Biased in favor of strain: 'B73' |
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| GRMZM5G896604 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.40797 x 10-2 | 18 | 3 | 21 | 4 | 85.71% | 16.00% | 21 | 25 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0640797' χ2 p-value for Mo17 x B73: '7.70e-08' Biased in favor of strain: '' |
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| GRMZM5G896568 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.626 x 10-4 | 351 | 237 | 309 | 229 | 59.69% | 42.57% | 588 | 538 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.59e-06' χ2 p-value for Mo17 x B73: '.0005626' Biased in favor of strain: 'B73' |
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| GRMZM5G896568 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.02739 x 10-2 | 121 | 84 | 121 | 152 | 59.02% | 55.68% | 205 | 273 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0202739' χ2 p-value for Mo17 x B73: '.0001173' Biased in favor of strain: '' |
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| GRMZM5G896560 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.6344 x 10-3 | 101 | 151 | 99 | 242 | 40.08% | 70.97% | 252 | 341 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0016344' χ2 p-value for Mo17 x B73: '9.64e-15' Biased in favor of strain: 'Mo17' |
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| GRMZM5G896560 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | maternally biased | 1.3744 x 10-3 | 44 | 6 | 0 | 226 | 88.00% | 100.00% | 50 | 226 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0013744' χ2 p-value for Mo17 x B73: '2.16e-26' Biased in favor of strain: '' |
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| GRMZM5G896337 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.955329 x 10-1 | 136 | 128 | 115 | 117 | 51.52% | 50.43% | 264 | 232 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6224607' χ2 p-value for Mo17 x B73: '.8955329' Biased in favor of strain: '' |
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| GRMZM5G896337 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.668822 x 10-1 | 62 | 29 | 40 | 15 | 68.13% | 27.27% | 91 | 55 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7668822' χ2 p-value for Mo17 x B73: '5.74e-10' Biased in favor of strain: '' |
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| GRMZM5G896294 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.034789 x 10-1 | 135 | 137 | 120 | 184 | 49.63% | 60.53% | 272 | 304 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9034789' χ2 p-value for Mo17 x B73: '.0002419' Biased in favor of strain: '' |
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| GRMZM5G896294 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.43 x 10-5 | 134 | 19 | 94 | 104 | 87.58% | 52.53% | 153 | 198 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.07e-08' χ2 p-value for Mo17 x B73: '.0000243' Biased in favor of strain: 'B73' |
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| GRMZM5G896082 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 3 | 0 | 100.00% | 0.00% | 4 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM5G896082 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G895991 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.58 x 10-6 | 108 | 31 | 77 | 31 | 77.70% | 28.70% | 139 | 108 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.53e-11' χ2 p-value for Mo17 x B73: '9.58e-06' Biased in favor of strain: 'B73' |
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| GRMZM5G895991 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.377 x 10-4 | 70 | 13 | 60 | 11 | 84.34% | 15.49% | 83 | 71 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0006377' χ2 p-value for Mo17 x B73: '5.85e-20' Biased in favor of strain: 'B73' |
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| GRMZM5G895933 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.625206 x 10-1 | 76 | 37 | 44 | 40 | 67.26% | 47.62% | 113 | 84 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002437' χ2 p-value for Mo17 x B73: '.6625206' Biased in favor of strain: '' |
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| GRMZM5G895933 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.794999 x 10-1 | 53 | 17 | 24 | 40 | 75.71% | 62.50% | 70 | 64 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1083269' χ2 p-value for Mo17 x B73: '.4794999' Biased in favor of strain: '' |
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| GRMZM5G895799 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.18 x 10-11 | 46 | 0 | 47 | 0 | 100.00% | 0.00% | 46 | 47 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.18e-11' χ2 p-value for Mo17 x B73: '7.10e-12' Biased in favor of strain: 'B73' |
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| GRMZM5G895799 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 1 | 1 | 100.00% | 50.00% | 2 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.617075' Biased in favor of strain: '' |
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| GRMZM5G895573 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.487741 x 10-1 | 80 | 76 | 49 | 68 | 51.28% | 58.12% | 156 | 117 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7487741' χ2 p-value for Mo17 x B73: '.0789944' Biased in favor of strain: '' |
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| GRMZM5G895573 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.57654 x 10-2 | 31 | 49 | 26 | 83 | 38.75% | 76.15% | 80 | 109 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.18e-07' χ2 p-value for Mo17 x B73: '.0357654' Biased in favor of strain: '' |