| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT2G46110 | KPHMT1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.38224 x 10-1 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G46110 | KPHMT1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 10 | 5 | 66.67% | 15 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G46110 | KPHMT1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.9119 x 10-2 | 9 | 0 | 100.00% | 9 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G46110 | KPHMT1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 3 | 0 | 3 | 1 | 100.00% | 25.00% | 3 | 4 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.800028' Avg. expression score for this sample: '26.3225' Avg. expression score in LCM sample: '42.1095' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G46100 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.713982' Avg. expression score for this sample: '3.09708' Avg. expression score in LCM sample: '4.82092' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G46100 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.40395 x 10-1 | 6 | 0 | 100.00% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G46100 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G46100 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 1 | 0 | 0 | 66.67% | 3 | 0 | TAIR8 |
Avg. embryo expression (dissected): '6.83465' Avg. embryo expression (LCM): '10.9636' |
|||||
| AT2G46100 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.13982 x 10-1 | 8 | 1 | 3 | 7 | 88.89% | 70.00% | 9 | 10 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.713982' Avg. expression score for this sample: '15.4417' Avg. expression score in LCM sample: '4.82092' Tissue used: 'full endosperm' |
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| AT2G46100 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.40395 x 10-1 | 6 | 0 | 100.00% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G46090 | LCBK2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.19036 x 10-1 | 15 | 8 | 65.22% | 23 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G46090 | LCBK2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 18 | 4 | 81.82% | 22 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G46090 | LCBK2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.07985 x 10-1 | 7 | 3 | 1 | 6 | 70.00% | 85.71% | 10 | 7 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.110619' Avg. expression score for this sample: '16.1473' Avg. expression score in LCM sample: '7.67231' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT2G46090 | LCBK2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.30014 x 10-1 | 4 | 0 | 2 | 15 | 100.00% | 88.24% | 4 | 17 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.110619' Avg. expression score for this sample: '12.9895' Avg. expression score in LCM sample: '7.67231' Tissue used: 'full endosperm' |
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| AT2G46090 | LCBK2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G46090 | LCBK2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.57862 x 10-1 | 6 | 9 | 3 | 3 | 40.00% | 50.00% | 15 | 6 | TAIR8 |
Avg. embryo expression (dissected): '37.6927' Avg. embryo expression (LCM): '26.1972' |
|||
| AT2G46080 | BPS2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 12 | 12 | 2 | 2 | 50.00% | 50.00% | 24 | 4 | TAIR8 |
Avg. embryo expression (dissected): '101.413' Avg. embryo expression (LCM): '77.9009' |
|||
| AT2G46080 | BPS2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.13 x 10-3 | 57 | 17 | 23 | 92 | 77.03% | 80.00% | 74 | 115 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.040076' Avg. expression score for this sample: '381.659' Avg. expression score in LCM sample: '75.1357' Tissue used: 'full endosperm' |
||||
| AT2G46080 | BPS2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.28517 x 10-1 | 14 | 1 | 93.33% | 15 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G46080 | BPS2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.602 x 10-3 | 47 | 3 | 94.00% | 50 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G46080 | BPS2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 26 | 23 | 14 | 51 | 53.06% | 78.46% | 49 | 65 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.040076' Avg. expression score for this sample: '268.129' Avg. expression score in LCM sample: '75.1357' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G46080 | BPS2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.1 x 10-7 | 84 | 2 | 97.67% | 86 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G46070 | MPK12 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G46070 | MPK12 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '35.4936' Avg. expression score in LCM sample: '47.9152' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT2G46070 | MPK12 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G46070 | MPK12 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '10.2944' Avg. embryo expression (LCM): '1.9089' |
|||||
| AT2G46070 | MPK12 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '23.3179' Avg. expression score in LCM sample: '47.9152' Tissue used: 'full endosperm' |
||||||
| AT2G46070 | MPK12 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G46060 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G46060 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '14.2921' Avg. expression score in LCM sample: '11.6995' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT2G46060 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G46060 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 0 | 0 | 1 | 2 | 66.67% | 0 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '37.7333' Avg. expression score in LCM sample: '11.6995' Tissue used: 'full endosperm' |
||||||
| AT2G46060 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G46060 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 2 | 0 | 0 | 0.00% | 2 | 0 | TAIR8 |
Avg. embryo expression (dissected): '49.2884' Avg. embryo expression (LCM): '30.4294' |
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| AT2G46050 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 1 | 1 | 2 | 0 | 50.00% | 0.00% | 2 | 2 | TAIR8 |
Avg. embryo expression (dissected): '3.39023' Avg. embryo expression (LCM): '4.25736' |
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| AT2G46050 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 1 | 2 | 0 | 7 | 33.33% | 100.00% | 3 | 7 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.640405' Avg. expression score for this sample: '6.29237' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||
| AT2G46050 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G46050 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.53846 x 10-1 | 1 | 2 | 33.33% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G46050 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.95604 x 10-1 | 1 | 1 | 50.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G46050 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.640405' Avg. expression score for this sample: '1.16455' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G46040 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '54.3434' Avg. expression score in LCM sample: '52.1923' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G46040 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G46040 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G46040 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '61.123' Avg. embryo expression (LCM): '68.8587' |
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| AT2G46040 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '64.527' Avg. expression score in LCM sample: '52.1923' Tissue used: 'full endosperm' |
|||||||
| AT2G46040 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G46030 | UBC6 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.4993 x 10-1 | 166 | 90 | 64.84% | 256 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G46030 | UBC6 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.5 x 10-11 | 179 | 14 | 92.75% | 193 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G46030 | UBC6 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 2 | 1 | 2 | 1 | 66.67% | 33.33% | 3 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.772633' Avg. expression score for this sample: '236.239' Avg. expression score in LCM sample: '130.503' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G46030 | UBC6 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.95978 x 10-1 | 68 | 13 | 62 | 96 | 83.95% | 60.76% | 81 | 158 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.772633' Avg. expression score for this sample: '410.904' Avg. expression score in LCM sample: '130.503' Tissue used: 'full endosperm' |
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| AT2G46030 | UBC6 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 6 | 2 | 75.00% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G46030 | UBC6 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 2 | 2 | 0 | 1 | 50.00% | 100.00% | 4 | 1 | TAIR8 |
Avg. embryo expression (dissected): '165.878' Avg. embryo expression (LCM): '117.372' |
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| AT2G46020 | BRM | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 2 | 2 | 2 | 2 | 50.00% | 50.00% | 4 | 4 | TAIR8 |
Avg. embryo expression (dissected): '447.766' Avg. embryo expression (LCM): '237.784' |
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| AT2G46020 | BRM | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.43829 x 10-1 | 14 | 10 | 11 | 21 | 58.33% | 65.62% | 24 | 32 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.851898' Avg. expression score for this sample: '408.301' Avg. expression score in LCM sample: '161.192' Tissue used: 'full endosperm' |
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| AT2G46020 | BRM | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G46020 | BRM | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 8.3048 x 10-2 | 32 | 8 | 80.00% | 40 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G46020 | BRM | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 3 | 1 | 1 | 2 | 75.00% | 66.67% | 4 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.851898' Avg. expression score for this sample: '389.24' Avg. expression score in LCM sample: '161.192' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G46020 | BRM | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.751 x 10-3 | 28 | 3 | 90.32% | 31 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G46000 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G46000 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '101.518' Avg. expression score in LCM sample: '42.8591' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT2G46000 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G46000 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '103.037' Avg. embryo expression (LCM): '103.068' |
||||||
| AT2G46000 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '401.23' Avg. expression score in LCM sample: '42.8591' Tissue used: 'full endosperm' |
|||||||
| AT2G46000 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G45990 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G45990 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '113.433' Avg. expression score in LCM sample: '81.0443' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G45990 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G45990 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '233.091' Avg. expression score in LCM sample: '81.0443' Tissue used: 'full endosperm' |
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| AT2G45990 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G45990 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '95.5157' Avg. embryo expression (LCM): '106.811' |
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| AT2G45980 | ATI1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.38262 x 10-1 | 15 | 21 | 5 | 7 | 41.67% | 58.33% | 36 | 12 | TAIR8 |
Avg. embryo expression (dissected): '78.8017' Avg. embryo expression (LCM): '49.7571' |
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| AT2G45980 | ATI1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.8 x 10-5 | 72 | 23 | 15 | 120 | 75.79% | 88.89% | 95 | 135 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000289' Avg. expression score for this sample: '154.895' Avg. expression score in LCM sample: '53.5739' Tissue used: 'full endosperm' |
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| AT2G45980 | ATI1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.32944 x 10-1 | 28 | 3 | 90.32% | 31 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G45980 | ATI1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.9022 x 10-2 | 218 | 32 | 87.20% | 250 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G45980 | ATI1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 143 | 37 | 79.44% | 180 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G45980 | ATI1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.4514 x 10-1 | 33 | 22 | 7 | 36 | 60.00% | 83.72% | 55 | 43 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000289' Avg. expression score for this sample: '97.0727' Avg. expression score in LCM sample: '53.5739' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G45970 | CYP86A8 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 2 | 1 | 1 | 1 | 66.67% | 50.00% | 3 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.547153' Avg. expression score for this sample: '12.603' Avg. expression score in LCM sample: '1.77845' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G45970 | CYP86A8 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.0822 x 10-2 | 21 | 0 | 100.00% | 21 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G45970 | CYP86A8 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G45970 | CYP86A8 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.30319 x 10-1 | 10 | 21 | 6 | 9 | 32.26% | 60.00% | 31 | 15 | TAIR8 |
Avg. embryo expression (dissected): '94.6219' Avg. embryo expression (LCM): '77.0092' |
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| AT2G45970 | CYP86A8 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.14098 x 10-1 | 1 | 2 | 2 | 18 | 33.33% | 90.00% | 3 | 20 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.547153' Avg. expression score for this sample: '27.4737' Avg. expression score in LCM sample: '1.77845' Tissue used: 'full endosperm' |
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| AT2G45970 | CYP86A8 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 8.244 x 10-3 | 1 | 5 | 16.67% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G45960 | PIP1B | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 8 | 2 | 80.00% | 10 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G45960 | PIP1B | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.2825 x 10-2 | 27 | 1 | 96.43% | 28 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G45960 | PIP1B | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.82043 x 10-1 | 5 | 1 | 0 | 4 | 83.33% | 100.00% | 6 | 4 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '72.9704' Avg. expression score in LCM sample: '19.3572' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G45960 | PIP1B | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 3 | 3 | 2 | 3 | 50.00% | 60.00% | 6 | 5 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '124.408' Avg. expression score in LCM sample: '19.3572' Tissue used: 'full endosperm' |
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| AT2G45960 | PIP1B | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.25692 x 10-1 | 1 | 1 | 50.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G45960 | PIP1B | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.02478 x 10-1 | 7 | 13 | 4 | 7 | 35.00% | 63.64% | 20 | 11 | TAIR8 |
Avg. embryo expression (dissected): '375.655' Avg. embryo expression (LCM): '253.897' |
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| AT2G45950 | SK20 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 19 | 15 | 4 | 2 | 55.88% | 33.33% | 34 | 6 | TAIR8 |
Avg. embryo expression (dissected): '66.1515' Avg. embryo expression (LCM): '53.7382' |
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| AT2G45950 | SK20 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.4223 x 10-1 | 43 | 7 | 18 | 27 | 86.00% | 60.00% | 50 | 45 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.681747' Avg. expression score for this sample: '50.035' Avg. expression score in LCM sample: '3.43931' Tissue used: 'full endosperm' |
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| AT2G45950 | SK20 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.72514 x 10-1 | 2 | 3 | 40.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G45950 | SK20 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.603 x 10-2 | 12 | 0 | 100.00% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G45950 | SK20 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.87081 x 10-1 | 11 | 5 | 7 | 6 | 68.75% | 46.15% | 16 | 13 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.681747' Avg. expression score for this sample: '26.9575' Avg. expression score in LCM sample: '3.43931' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G45950 | SK20 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.6 x 10-7 | 64 | 1 | 98.46% | 65 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G45940 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G45940 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '1.68476' Avg. expression score in LCM sample: '1.20523' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G45940 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G45940 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '1.56207' Avg. embryo expression (LCM): '0' |
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| AT2G45940 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '5.0322' Avg. expression score in LCM sample: '1.20523' Tissue used: 'full endosperm' |
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| AT2G45940 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' |