Displaying data sets 99501 - 99600 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT2G46535 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46535 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '16.547'
Avg. embryo expression (LCM): '3.215'
AT2G46535 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46535 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '8.5624'
Avg. expression score in LCM sample: '1.88133'
Tissue used: 'pure endosperm, no chalazal'
AT2G46530 ARF11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.36005 x 10-1 1573 810 979 1934 66.01% 66.39% 2383 2913 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.191871'
Avg. expression score for this sample: '1254.47'
Avg. expression score in LCM sample: '763.101'
Tissue used: 'pure endosperm, no chalazal'
AT2G46530 ARF11 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.19944 x 10-1 78 36 68.42% 114 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46530 ARF11 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.7536 x 10-2 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46530 ARF11 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.3388 x 10-2 84 51 56 67 62.22% 54.47% 135 123 TAIR8 Avg. embryo expression (dissected): '104.81'
Avg. embryo expression (LCM): '30.5801'
AT2G46530 ARF11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.61461 x 10-1 1815 857 910 1519 67.93% 62.54% 2672 2429 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.191871'
Avg. expression score for this sample: '1258.18'
Avg. expression score in LCM sample: '763.101'
Tissue used: 'full endosperm'
AT2G46530 ARF11 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.62621 x 10-1 323 183 63.83% 506 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46520 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.823 x 10-3 56 6 90.32% 62 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46520 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.465 x 10-3 68 145 18 28 31.92% 60.87% 213 46 TAIR8 Avg. embryo expression (dissected): '177.077'
Avg. embryo expression (LCM): '276.465'
AT2G46520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.43 x 10-4 87 55 53 292 61.27% 84.64% 142 345 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001503'
Avg. expression score for this sample: '178.322'
Avg. expression score in LCM sample: '182.431'
Tissue used: 'full endosperm'
AT2G46520 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.7 x 10-5 399 229 63.54% 628 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46520 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.1 x 10-11 1009 149 87.13% 1158 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 60 42 28 81 58.82% 74.31% 102 109 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001503'
Avg. expression score for this sample: '88.3215'
Avg. expression score in LCM sample: '182.431'
Tissue used: 'pure endosperm, no chalazal'
AT2G46510 AIB endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 30 16 24 49 65.22% 67.12% 46 73 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.446306'
Avg. expression score for this sample: '138.006'
Avg. expression score in LCM sample: '9.95049'
Tissue used: 'pure endosperm, no chalazal'
AT2G46510 AIB endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.9 x 10-5 61 5 92.42% 66 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46510 AIB endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.14387 x 10-1 74 34 47 123 68.52% 72.35% 108 170 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.446306'
Avg. expression score for this sample: '347.18'
Avg. expression score in LCM sample: '9.95049'
Tissue used: 'full endosperm'
AT2G46510 AIB endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.7727 x 10-2 19 2 90.48% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46510 AIB embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.81268 x 10-1 31 27 8 19 53.45% 70.37% 58 27 TAIR8 Avg. embryo expression (dissected): '171.93'
Avg. embryo expression (LCM): '47.3207'
AT2G46510 AIB endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.0 x 10-6 99 10 90.83% 109 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46505 SDH4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.25971 x 10-1 12 0 100.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46505 SDH4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.1063 x 10-1 31 6 83.78% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46505 SDH4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.77097 x 10-1 6 5 3 15 54.55% 83.33% 11 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.011801'
Avg. expression score for this sample: '173.209'
Avg. expression score in LCM sample: '64.5238'
Tissue used: 'pure endosperm, no chalazal'
AT2G46505 SDH4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.9859 x 10-2 4 19 2 1 17.39% 33.33% 23 3 TAIR8 Avg. embryo expression (dissected): '208.031'
Avg. embryo expression (LCM): '148.555'
AT2G46505 SDH4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.949 x 10-3 28 11 3 45 71.79% 93.75% 39 48 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.011801'
Avg. expression score for this sample: '165.604'
Avg. expression score in LCM sample: '64.5238'
Tissue used: 'full endosperm'
AT2G46505 SDH4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 13 3 81.25% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46500 PI4K GAMMA 4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46500 PI4K GAMMA 4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Avg. embryo expression (dissected): '117.006'
Avg. embryo expression (LCM): '90.2836'
AT2G46500 PI4K GAMMA 4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.9592 x 10-2 38 5 18 48 88.37% 72.73% 43 66 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.025772'
Avg. expression score for this sample: '356.311'
Avg. expression score in LCM sample: '134.942'
Tissue used: 'full endosperm'
AT2G46500 PI4K GAMMA 4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.9708 x 10-2 59 6 90.77% 65 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46500 PI4K GAMMA 4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 0 0 1 100.00% 100.00% 3 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.025772'
Avg. expression score for this sample: '215.994'
Avg. expression score in LCM sample: '134.942'
Tissue used: 'pure endosperm, no chalazal'
AT2G46500 PI4K GAMMA 4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.12156 x 10-1 48 22 68.57% 70 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46495 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46495 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.682213'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G46495 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.391627'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G46495 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46495 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.724334'
Avg. embryo expression (LCM): '0'
AT2G46495 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46490 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '29.1837'
Avg. expression score in LCM sample: '27.2646'
Tissue used: 'pure endosperm, no chalazal'
AT2G46490 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46490 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '24.6568'
Avg. embryo expression (LCM): '23.2962'
AT2G46490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '36.2799'
Avg. expression score in LCM sample: '27.2646'
Tissue used: 'full endosperm'
AT2G46490 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46480 GAUT2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46480 GAUT2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G46480 GAUT2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.334589'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G46480 GAUT2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46480 GAUT2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46480 GAUT2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.78404'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G46470 OXA1L endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '96.977'
Avg. expression score in LCM sample: '49.3556'
Tissue used: 'pure endosperm, no chalazal'
AT2G46470 OXA1L endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46470 OXA1L endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '64.9617'
Avg. expression score in LCM sample: '49.3556'
Tissue used: 'full endosperm'
AT2G46470 OXA1L endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46470 OXA1L embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '165.556'
Avg. embryo expression (LCM): '146.835'
AT2G46470 OXA1L endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46460 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46460 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G46460 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G46460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.50148'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G46460 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46455 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46455 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '3.00074'
Avg. embryo expression (LCM): '22.7185'
AT2G46455 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 4 4 0 3 50.00% 100.00% 8 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '9.92874'
Avg. expression score in LCM sample: '3.79206'
Tissue used: 'full endosperm'
AT2G46455 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46455 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 3 0 8 0.00% 100.00% 3 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '10.0337'
Avg. expression score in LCM sample: '3.79206'
Tissue used: 'pure endosperm, no chalazal'
AT2G46455 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46450 CNGC12 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46450 CNGC12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.83186 x 10-1 62 22 14 26 73.81% 65.00% 84 40 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.848711'
Avg. expression score for this sample: '25.4415'
Avg. expression score in LCM sample: '27.7497'
Tissue used: 'pure endosperm, no chalazal'
AT2G46450 CNGC12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.94354 x 10-1 63 24 20 19 72.41% 48.72% 87 39 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.848711'
Avg. expression score for this sample: '20.45'
Avg. expression score in LCM sample: '27.7497'
Tissue used: 'full endosperm'
AT2G46450 CNGC12 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0362 x 10-1 1 3 25.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46450 CNGC12 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 79 58 32 13 57.66% 28.89% 137 45 TAIR8 Avg. embryo expression (dissected): '67.1387'
Avg. embryo expression (LCM): '55.3205'
AT2G46450 CNGC12 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.33351 x 10-1 2 3 40.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46440 CNGC11 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46440 CNGC11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 3 100.00% 0 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.340644'
Avg. expression score for this sample: '5.53808'
Avg. expression score in LCM sample: '19.5335'
Tissue used: 'pure endosperm, no chalazal'
AT2G46440 CNGC11 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.5 x 10-4 15 0 100.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46440 CNGC11 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 5.2381 x 10-1 1 4 0 0 20.00% 5 0 TAIR8 Avg. embryo expression (dissected): '16.1653'
Avg. embryo expression (LCM): '29.6131'
AT2G46440 CNGC11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.69354 x 10-1 2 9 2 4 18.18% 66.67% 11 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.340644'
Avg. expression score for this sample: '9.20499'
Avg. expression score in LCM sample: '19.5335'
Tissue used: 'full endosperm'
AT2G46440 CNGC11 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46430 CNGC3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46430 CNGC3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G46430 CNGC3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 0 2 100.00% 100.00% 2 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.454545'
Avg. expression score for this sample: '.709162'
Avg. expression score in LCM sample: '1.19053'
Tissue used: 'full endosperm'
AT2G46430 CNGC3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.3333 x 10-2 1 3 25.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46430 CNGC3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 42 0 100.00% 42 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46430 CNGC3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.454545'
Avg. expression score for this sample: '.318465'
Avg. expression score in LCM sample: '1.19053'
Tissue used: 'pure endosperm, no chalazal'
AT2G46420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 7 4 0 2 63.64% 100.00% 11 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.579184'
Avg. expression score for this sample: '14.3103'
Avg. expression score in LCM sample: '13.4339'
Tissue used: 'pure endosperm, no chalazal'
AT2G46420 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.19238 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.37917 x 10-1 18 5 10 23 78.26% 69.70% 23 33 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.579184'
Avg. expression score for this sample: '17.0088'
Avg. expression score in LCM sample: '13.4339'
Tissue used: 'full endosperm'
AT2G46420 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.0124 x 10-2 1 4 20.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46420 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.82051 x 10-1 4 0 1 2 100.00% 66.67% 4 3 TAIR8 Avg. embryo expression (dissected): '16.5303'
Avg. embryo expression (LCM): '30.4043'
AT2G46420 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.0596 x 10-2 17 1 94.44% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46410 CPC endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46410 CPC endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G46410 CPC endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.55178'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G46410 CPC embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '25.3053'
Avg. embryo expression (LCM): '21.6133'
AT2G46410 CPC endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '28.5176'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G46410 CPC endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'