| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT5G53030 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '6.9534' Avg. embryo expression (LCM): '4.53365' |
||||||
| AT5G53030 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G53030 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G53030 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G53020 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.74922 x 10-1 | 82 | 87 | 48 | 142 | 48.52% | 74.74% | 169 | 190 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.666613' Avg. expression score for this sample: '1534.41' Avg. expression score in LCM sample: '417.774' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G53020 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.44947 x 10-1 | 131 | 125 | 60 | 314 | 51.17% | 83.96% | 256 | 374 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.666613' Avg. expression score for this sample: '1524.12' Avg. expression score in LCM sample: '417.774' Tissue used: 'full endosperm' |
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| AT5G53020 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.57977 x 10-1 | 6 | 5 | 2 | 9 | 54.55% | 81.82% | 11 | 11 | TAIR8 |
Avg. embryo expression (dissected): '164.471' Avg. embryo expression (LCM): '67.4019' |
||||
| AT5G53020 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 8.6727 x 10-2 | 22 | 4 | 84.62% | 26 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G53020 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.1 x 10-8 | 49 | 0 | 100.00% | 49 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G53020 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.645 x 10-3 | 42 | 6 | 87.50% | 48 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G53010 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.5103 x 10-2 | 15 | 0 | 4 | 17 | 100.00% | 80.95% | 15 | 21 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.005339' Avg. expression score for this sample: '10.4851' Avg. expression score in LCM sample: '9.43606' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT5G53010 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.2353 x 10-2 | 35 | 4 | 8 | 19 | 89.74% | 70.37% | 39 | 27 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.005339' Avg. expression score for this sample: '12.2591' Avg. expression score in LCM sample: '9.43606' Tissue used: 'full endosperm' |
|||||
| AT5G53010 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 10 | 10 | 0 | 1 | 50.00% | 100.00% | 20 | 1 | TAIR8 |
Avg. embryo expression (dissected): '11.7695' Avg. embryo expression (LCM): '16.502' |
||||
| AT5G53010 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G53010 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.75548 x 10-1 | 23 | 6 | 79.31% | 29 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G53010 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.91551 x 10-1 | 23 | 1 | 95.83% | 24 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G53000 | TAP46 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.02775 x 10-1 | 145 | 82 | 46 | 140 | 63.88% | 75.27% | 227 | 186 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000277' Avg. expression score for this sample: '323.509' Avg. expression score in LCM sample: '140.248' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT5G53000 | TAP46 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.6 x 10-5 | 186 | 88 | 89 | 382 | 67.88% | 81.10% | 274 | 471 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000277' Avg. expression score for this sample: '408.901' Avg. expression score in LCM sample: '140.248' Tissue used: 'full endosperm' |
||||
| AT5G53000 | TAP46 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.85495 x 10-1 | 81 | 135 | 28 | 49 | 37.50% | 63.64% | 216 | 77 | TAIR8 |
Avg. embryo expression (dissected): '357.143' Avg. embryo expression (LCM): '272.509' |
|||
| AT5G53000 | TAP46 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.2873 x 10-2 | 85 | 17 | 83.33% | 102 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G53000 | TAP46 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.9 x 10-7 | 616 | 122 | 83.47% | 738 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G53000 | TAP46 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.8 x 10-7 | 644 | 128 | 83.42% | 772 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G52990 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.131 x 10-3 | 115 | 11 | 123 | 35 | 91.27% | 22.15% | 126 | 158 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '7.3e-07' Avg. expression score for this sample: '176.763' Avg. expression score in LCM sample: '67.0519' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT5G52990 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.75 x 10-4 | 265 | 29 | 288 | 157 | 90.14% | 35.28% | 294 | 445 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '7.3e-07' Avg. expression score for this sample: '245.053' Avg. expression score in LCM sample: '67.0519' Tissue used: 'full endosperm' |
|||||
| AT5G52990 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.37861 x 10-1 | 60 | 20 | 29 | 8 | 75.00% | 21.62% | 80 | 37 | TAIR8 |
Avg. embryo expression (dissected): '138.034' Avg. embryo expression (LCM): '98.8737' |
||||
| AT5G52990 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.0 x 10-7 | 8 | 38 | 17.39% | 46 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G52990 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.8 x 10-21 | 349 | 644 | 35.15% | 993 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G52990 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 913 | 39 | 95.90% | 952 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G52980 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 10 | 1 | 4 | 4 | 90.91% | 50.00% | 11 | 8 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.584973' Avg. expression score for this sample: '16.3788' Avg. expression score in LCM sample: '46.6365' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT5G52980 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 5 | 1 | 2 | 5 | 83.33% | 71.43% | 6 | 7 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.584973' Avg. expression score for this sample: '38.203' Avg. expression score in LCM sample: '46.6365' Tissue used: 'full endosperm' |
|||||
| AT5G52980 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.28308 x 10-1 | 3 | 4 | 5 | 1 | 42.86% | 16.67% | 7 | 6 | TAIR8 |
Avg. embryo expression (dissected): '30.388' Avg. embryo expression (LCM): '21.9901' |
||||
| AT5G52980 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.5508 x 10-1 | 4 | 0 | 100.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G52980 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 23 | 7 | 76.67% | 30 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G52980 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.35653 x 10-1 | 16 | 1 | 94.12% | 17 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G52975 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '2.54274' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT5G52975 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '2.54274' Tissue used: 'full endosperm' |
|||||||
| AT5G52975 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '1.28795' Avg. embryo expression (LCM): '13.0358' |
||||||
| AT5G52975 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G52975 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G52975 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G52970 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.90536 x 10-1 | 16 | 12 | 8 | 10 | 57.14% | 55.56% | 28 | 18 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.455332' Avg. expression score for this sample: '190.468' Avg. expression score in LCM sample: '11.4938' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT5G52970 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.59219 x 10-1 | 22 | 17 | 17 | 38 | 56.41% | 69.09% | 39 | 55 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.455332' Avg. expression score for this sample: '153.062' Avg. expression score in LCM sample: '11.4938' Tissue used: 'full endosperm' |
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| AT5G52970 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.84456 x 10-1 | 38 | 49 | 9 | 13 | 43.68% | 59.09% | 87 | 22 | TAIR8 |
Avg. embryo expression (dissected): '426.301' Avg. embryo expression (LCM): '185.226' |
||||
| AT5G52970 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 2 | 60.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G52970 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.6959 x 10-2 | 10 | 1 | 90.91% | 11 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G52970 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.70486 x 10-1 | 10 | 4 | 71.43% | 14 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G52965 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '2.12498' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G52965 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '1.4994' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT5G52965 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '6.86841' Avg. embryo expression (LCM): '6.93233' |
||||||
| AT5G52965 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G52965 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G52965 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G52960 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.80761 x 10-1 | 18 | 16 | 9 | 21 | 52.94% | 70.00% | 34 | 30 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.709905' Avg. expression score for this sample: '115.988' Avg. expression score in LCM sample: '20.6506' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G52960 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.63938 x 10-1 | 81 | 50 | 56 | 160 | 61.83% | 74.07% | 131 | 216 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.709905' Avg. expression score for this sample: '188.965' Avg. expression score in LCM sample: '20.6506' Tissue used: 'full endosperm' |
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| AT5G52960 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.0795 x 10-1 | 22 | 30 | 1 | 4 | 42.31% | 80.00% | 52 | 5 | TAIR8 |
Avg. embryo expression (dissected): '169.334' Avg. embryo expression (LCM): '178.03' |
||||
| AT5G52960 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.92443 x 10-1 | 21 | 6 | 77.78% | 27 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G52960 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.5367 x 10-2 | 210 | 66 | 76.09% | 276 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G52960 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.94332 x 10-1 | 65 | 39 | 62.50% | 104 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G52950 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '152.978' Avg. expression score in LCM sample: '82.176' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G52950 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 1 | 1 | 3 | 5 | 50.00% | 62.50% | 2 | 8 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '111.594' Avg. expression score in LCM sample: '82.176' Tissue used: 'full endosperm' |
|||||
| AT5G52950 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Avg. embryo expression (dissected): '139.993' Avg. embryo expression (LCM): '165.145' |
|||||
| AT5G52950 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G52950 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.94153 x 10-1 | 13 | 5 | 72.22% | 18 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G52950 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 5 | 3 | 62.50% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G52940 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.549067' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT5G52940 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.477169' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT5G52940 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.531361' Avg. embryo expression (LCM): '0' |
||||||
| AT5G52940 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G52940 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G52940 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G52930 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G52930 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.231662' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT5G52930 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.37173' Avg. embryo expression (LCM): '0' |
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| AT5G52930 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G52930 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 8 | 3 | 72.73% | 11 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G52930 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.90909 x 10-1 | 5 | 4 | 55.56% | 9 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G52920 | PKP-BETA1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.43777 x 10-1 | 85 | 20 | 46 | 36 | 80.95% | 43.90% | 105 | 82 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.072609' Avg. expression score for this sample: '10916.1' Avg. expression score in LCM sample: '4814.29' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G52920 | PKP-BETA1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.2668 x 10-2 | 201 | 73 | 191 | 227 | 73.36% | 54.31% | 274 | 418 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.072609' Avg. expression score for this sample: '6507.42' Avg. expression score in LCM sample: '4814.29' Tissue used: 'full endosperm' |
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| AT5G52920 | PKP-BETA1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.65576 x 10-1 | 93 | 57 | 29 | 16 | 62.00% | 35.56% | 150 | 45 | TAIR8 |
Avg. embryo expression (dissected): '13426.7' Avg. embryo expression (LCM): '7271.98' |
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| AT5G52920 | PKP-BETA1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.99478 x 10-1 | 17 | 12 | 58.62% | 29 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G52920 | PKP-BETA1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.77431 x 10-1 | 50 | 23 | 68.49% | 73 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G52920 | PKP-BETA1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.0 x 10-5 | 100 | 23 | 81.30% | 123 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G52910 | ATIM | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 29 | 15 | 20 | 37 | 65.91% | 64.91% | 44 | 57 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.905919' Avg. expression score for this sample: '22.8316' Avg. expression score in LCM sample: '19.8422' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G52910 | ATIM | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.59294 x 10-1 | 13 | 2 | 15 | 32 | 86.67% | 68.09% | 15 | 47 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.905919' Avg. expression score for this sample: '19.4899' Avg. expression score in LCM sample: '19.8422' Tissue used: 'full endosperm' |
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| AT5G52910 | ATIM | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.36507 x 10-1 | 36 | 21 | 16 | 11 | 63.16% | 40.74% | 57 | 27 | TAIR8 |
Avg. embryo expression (dissected): '37.2044' Avg. embryo expression (LCM): '45.9142' |
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| AT5G52910 | ATIM | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.35858 x 10-1 | 7 | 7 | 50.00% | 14 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G52910 | ATIM | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 8.07143 x 10-1 | 94 | 47 | 66.67% | 141 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G52910 | ATIM | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.4 x 10-5 | 34 | 53 | 39.08% | 87 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G52901 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G52901 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '9.50367' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT5G52901 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '2.5579' Avg. embryo expression (LCM): '0' |
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| AT5G52901 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G52901 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G52901 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G52900 | MAKR6 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1.63068' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G52900 | MAKR6 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '11.7231' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT5G52900 | MAKR6 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '15.6137' Avg. embryo expression (LCM): '4.93552' |
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| AT5G52900 | MAKR6 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G52900 | MAKR6 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G52900 | MAKR6 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' |