Displaying data sets 98701 - 98800 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT2G47770 TSPO endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.1132 x 10-1 32 11 6 32 74.42% 84.21% 43 38 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.013697'
Avg. expression score for this sample: '64.1871'
Avg. expression score in LCM sample: '2.822'
Tissue used: 'pure endosperm, no chalazal'
AT2G47770 TSPO endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.2255 x 10-1 232 78 74.84% 310 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47770 TSPO endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.365 x 10-3 18 17 51.43% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47770 TSPO embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.03567 x 10-1 8 5 0 1 61.54% 100.00% 13 1 TAIR8 Avg. embryo expression (dissected): '10.7701'
Avg. embryo expression (LCM): '0'
AT2G47770 TSPO endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.9231 x 10-2 84 14 28 47 85.71% 62.67% 98 75 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.013697'
Avg. expression score for this sample: '94.4127'
Avg. expression score in LCM sample: '2.822'
Tissue used: 'full endosperm'
AT2G47770 TSPO endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.715 x 10-3 61 41 59.80% 102 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47760 ALG3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.3 x 10-5 148 9 94.27% 157 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47760 ALG3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.8137 x 10-2 86 11 88.66% 97 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47760 ALG3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.97226 x 10-1 9 6 4 16 60.00% 80.00% 15 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.39097'
Avg. expression score for this sample: '41.4396'
Avg. expression score in LCM sample: '21.7676'
Tissue used: 'pure endosperm, no chalazal'
AT2G47760 ALG3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.62073 x 10-1 23 3 8 13 88.46% 61.90% 26 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.39097'
Avg. expression score for this sample: '54.2195'
Avg. expression score in LCM sample: '21.7676'
Tissue used: 'full endosperm'
AT2G47760 ALG3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47760 ALG3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 4 1 4 33.33% 80.00% 6 5 TAIR8 Avg. embryo expression (dissected): '43.7733'
Avg. embryo expression (LCM): '27.9052'
AT2G47750 GH3.9 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.0476 x 10-2 11 3 1 8 78.57% 88.89% 14 9 TAIR8 Avg. embryo expression (dissected): '69.9679'
Avg. embryo expression (LCM): '2.91359'
AT2G47750 GH3.9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 1527 11 15 1179 99.28% 98.74% 1538 1194 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1625.54'
Avg. expression score in LCM sample: '10.9352'
Tissue used: 'full endosperm'
AT2G47750 GH3.9 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 82 0 100.00% 82 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47750 GH3.9 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.0 x 10-8 11149 20 99.82% 11169 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47750 GH3.9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.0 x 10-26 149 0 1 86 100.00% 98.85% 149 87 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '332.578'
Avg. expression score in LCM sample: '10.9352'
Tissue used: 'pure endosperm, no chalazal'
AT2G47750 GH3.9 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.9 x 10-10 7077 6 99.92% 7083 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47740 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G47740 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47740 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G47740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G47740 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47730 GSTF8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47730 GSTF8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '275.537'
Avg. expression score in LCM sample: '8.83345'
Tissue used: 'pure endosperm, no chalazal'
AT2G47730 GSTF8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47730 GSTF8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '483.801'
Avg. expression score in LCM sample: '8.83345'
Tissue used: 'full endosperm'
AT2G47730 GSTF8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47730 GSTF8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '381.639'
Avg. embryo expression (LCM): '89.2538'
AT2G47720 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '24.4254'
Avg. embryo expression (LCM): '17.356'
AT2G47720 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.08071'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G47720 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47720 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '5.92701'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G47720 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47720 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47710 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.0 x 10-9 120 5 96.00% 125 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47710 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 44 15 74.58% 59 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47710 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 57 74 11 27 43.51% 71.05% 131 38 TAIR8 Avg. embryo expression (dissected): '499.171'
Avg. embryo expression (LCM): '204.366'
AT2G47710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.6 x 10-5 144 41 27 141 77.84% 83.93% 185 168 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002093'
Avg. expression score for this sample: '414.013'
Avg. expression score in LCM sample: '131.458'
Tissue used: 'full endosperm'
AT2G47710 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.9 x 10-9 176 13 93.12% 189 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.31899 x 10-1 80 66 35 129 54.79% 78.66% 146 164 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002093'
Avg. expression score for this sample: '666.977'
Avg. expression score in LCM sample: '131.458'
Tissue used: 'pure endosperm, no chalazal'
AT2G47700 RFI2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.034 281 93 144 317 75.13% 68.76% 374 461 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.024941'
Avg. expression score for this sample: '451.949'
Avg. expression score in LCM sample: '124.771'
Tissue used: 'pure endosperm, no chalazal'
AT2G47700 RFI2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2 x 10-18 229 12 95.02% 241 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47700 RFI2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.424 x 10-3 99 21 82.50% 120 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47700 RFI2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.31094 x 10-1 138 82 31 120 62.73% 79.47% 220 151 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.024941'
Avg. expression score for this sample: '213.042'
Avg. expression score in LCM sample: '124.771'
Tissue used: 'full endosperm'
AT2G47700 RFI2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.4 x 10-10 92 3 96.84% 95 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47700 RFI2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.9363 x 10-1 140 146 79 98 48.95% 55.37% 286 177 TAIR8 Avg. embryo expression (dissected): '593.81'
Avg. embryo expression (LCM): '97.3792'
AT2G47690 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.64403 x 10-1 30 13 5 3 69.77% 37.50% 43 8 TAIR8 Avg. embryo expression (dissected): '577.946'
Avg. embryo expression (LCM): '362.893'
AT2G47690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.38286 x 10-1 32 10 18 39 76.19% 68.42% 42 57 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.723335'
Avg. expression score for this sample: '362.244'
Avg. expression score in LCM sample: '168.997'
Tissue used: 'full endosperm'
AT2G47690 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.2717 x 10-2 14 1 93.33% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47690 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.62 x 10-3 80 13 86.02% 93 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.51259 x 10-1 27 14 9 12 65.85% 57.14% 41 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.723335'
Avg. expression score for this sample: '398.813'
Avg. expression score in LCM sample: '168.997'
Tissue used: 'pure endosperm, no chalazal'
AT2G47690 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 42 19 68.85% 61 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47680 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.00794 x 10-1 6 2 75.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47680 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.6395 x 10-1 1 2 33.33% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47680 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.70916 x 10-1 10 8 7 0 55.56% 0.00% 18 7 TAIR8 Avg. embryo expression (dissected): '68.5026'
Avg. embryo expression (LCM): '46.6677'
AT2G47680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.71684 x 10-1 13 9 10 10 59.09% 50.00% 22 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.57009'
Avg. expression score for this sample: '38.0384'
Avg. expression score in LCM sample: '22.5172'
Tissue used: 'full endosperm'
AT2G47680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 8 4 1 5 66.67% 83.33% 12 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.57009'
Avg. expression score for this sample: '28.2845'
Avg. expression score in LCM sample: '22.5172'
Tissue used: 'pure endosperm, no chalazal'
AT2G47680 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.25 x 10-4 18 0 100.00% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47670 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2 x 10-6 80 0 100.00% 80 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.8691 x 10-2 14 12 3 46 53.85% 93.88% 26 49 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.041846'
Avg. expression score for this sample: '39.9381'
Avg. expression score in LCM sample: '32.4677'
Tissue used: 'pure endosperm, no chalazal'
AT2G47670 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.1 x 10-7 122 2 98.39% 124 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.48718 x 10-1 19 5 5 17 79.17% 77.27% 24 22 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.041846'
Avg. expression score for this sample: '15.0168'
Avg. expression score in LCM sample: '32.4677'
Tissue used: 'full endosperm'
AT2G47670 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.189 x 10-3 49 2 96.08% 51 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47670 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.2381 x 10-1 3 1 0 1 75.00% 100.00% 4 1 TAIR8 Avg. embryo expression (dissected): '3.7632'
Avg. embryo expression (LCM): '3.07685'
AT2G47660 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.73888'
Avg. embryo expression (LCM): '0'
AT2G47660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G47660 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G47660 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47660 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47650 UXS4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.1 x 10-5 147 32 82.12% 179 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47650 UXS4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.16617 x 10-1 15 6 71.43% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47650 UXS4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.60831 x 10-1 26 23 8 8 53.06% 50.00% 49 16 TAIR8 Avg. embryo expression (dissected): '1192.18'
Avg. embryo expression (LCM): '704.059'
AT2G47650 UXS4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.32957 x 10-1 202 75 162 252 72.92% 60.87% 277 414 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.83466'
Avg. expression score for this sample: '2541.66'
Avg. expression score in LCM sample: '6884.18'
Tissue used: 'full endosperm'
AT2G47650 UXS4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 x 10-12 159 15 91.38% 174 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47650 UXS4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.98502 x 10-1 296 63 126 119 82.45% 48.57% 359 245 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.83466'
Avg. expression score for this sample: '6362.12'
Avg. expression score in LCM sample: '6884.18'
Tissue used: 'pure endosperm, no chalazal'
AT2G47640 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 38 19 5 12 66.67% 70.59% 57 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.718634'
Avg. expression score for this sample: '67.9044'
Avg. expression score in LCM sample: '34.5548'
Tissue used: 'pure endosperm, no chalazal'
AT2G47640 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.08158 x 10-1 43 13 76.79% 56 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47640 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.911 x 10-3 67 9 88.16% 76 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47640 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.40723 x 10-1 20 7 18 40 74.07% 68.97% 27 58 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.718634'
Avg. expression score for this sample: '74.9678'
Avg. expression score in LCM sample: '34.5548'
Tissue used: 'full endosperm'
AT2G47640 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.321 x 10-2 9 11 45.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47640 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.41824 x 10-1 73 55 14 6 57.03% 30.00% 128 20 TAIR8 Avg. embryo expression (dissected): '160.459'
Avg. embryo expression (LCM): '253.922'
AT2G47630 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '672.467'
Avg. embryo expression (LCM): '233.577'
AT2G47630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '90.9175'
Avg. expression score in LCM sample: '2.29287'
Tissue used: 'full endosperm'
AT2G47630 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47630 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '139.799'
Avg. expression score in LCM sample: '2.29287'
Tissue used: 'pure endosperm, no chalazal'
AT2G47630 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47620 SWI3A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.854 x 10-2 138 86 61.61% 224 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47620 SWI3A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.8255 x 10-2 14 14 50.00% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47620 SWI3A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.59972 x 10-1 104 77 49 27 57.46% 35.53% 181 76 TAIR8 Avg. embryo expression (dissected): '127.272'
Avg. embryo expression (LCM): '102.943'
AT2G47620 SWI3A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.51235 x 10-1 70 17 47 71 80.46% 60.17% 87 118 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.519523'
Avg. expression score for this sample: '59.6656'
Avg. expression score in LCM sample: '43.2119'
Tissue used: 'full endosperm'
AT2G47620 SWI3A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.26836 x 10-1 99 34 41 68 74.44% 62.39% 133 109 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.519523'
Avg. expression score for this sample: '69.2167'
Avg. expression score in LCM sample: '43.2119'
Tissue used: 'pure endosperm, no chalazal'
AT2G47620 SWI3A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.5 x 10-9 178 21 89.45% 199 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47610 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.5 x 10-22 806 181 81.66% 987 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.84289 x 10-1 385 214 159 300 64.27% 65.36% 599 459 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.409704'
Avg. expression score for this sample: '537.863'
Avg. expression score in LCM sample: '399.798'
Tissue used: 'pure endosperm, no chalazal'
AT2G47610 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.75 x 10-4 707 276 71.92% 983 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G47610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.58417 x 10-1 376 164 350 626 69.63% 64.14% 540 976 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.409704'
Avg. expression score for this sample: '861.191'
Avg. expression score in LCM sample: '399.798'
Tissue used: 'full endosperm'