Displaying data sets 98401 - 98500 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G01070 ENODL16 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.091 x 10-3 662 31 457 97 95.53% 17.51% 693 554 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.732586'
Avg. expression score for this sample: '1537.23'
Avg. expression score in LCM sample: '853.317'
Tissue used: 'pure endosperm, no chalazal'
AT3G01070 ENODL16 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.3 x 10-9 253 11 29 13 95.83% 30.95% 264 42 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.732586'
Avg. expression score for this sample: '631.319'
Avg. expression score in LCM sample: '853.317'
Tissue used: 'full endosperm'
AT3G01070 ENODL16 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.8 x 10-5 7 19 26.92% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01070 ENODL16 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.55155 x 10-1 27 2 26 5 93.10% 16.13% 29 31 TAIR8 Avg. embryo expression (dissected): '125.821'
Avg. embryo expression (LCM): '44.6457'
AT3G01070 ENODL16 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.675 x 10-3 3 9 25.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01070 ENODL16 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.095 x 10-3 25 2 92.59% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01060 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01060 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '7.38357'
Avg. expression score in LCM sample: '1.82254'
Tissue used: 'pure endosperm, no chalazal'
AT3G01060 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '9.68492'
Avg. embryo expression (LCM): '6.25417'
AT3G01060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '17.3058'
Avg. expression score in LCM sample: '1.82254'
Tissue used: 'full endosperm'
AT3G01060 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01050 MUB1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.39455 x 10-1 2 2 50.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01050 MUB1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.6922 x 10-2 22 5 4 2 81.48% 33.33% 27 6 TAIR8 Avg. embryo expression (dissected): '146.399'
Avg. embryo expression (LCM): '82.9996'
AT3G01050 MUB1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.34836 x 10-1 29 2 12 18 93.55% 60.00% 31 30 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.117555'
Avg. expression score for this sample: '101.965'
Avg. expression score in LCM sample: '33.232'
Tissue used: 'full endosperm'
AT3G01050 MUB1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.18278 x 10-1 10 0 100.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01050 MUB1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.552 x 10-3 37 1 97.37% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01050 MUB1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.5306 x 10-1 21 5 4 10 80.77% 71.43% 26 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.117555'
Avg. expression score for this sample: '97.4373'
Avg. expression score in LCM sample: '33.232'
Tissue used: 'pure endosperm, no chalazal'
AT3G01040 GAUT13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.80579 x 10-1 9 3 0 10 75.00% 100.00% 12 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.043875'
Avg. expression score for this sample: '60.3653'
Avg. expression score in LCM sample: '60.0704'
Tissue used: 'pure endosperm, no chalazal'
AT3G01040 GAUT13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.80579 x 10-1 4 1 2 15 80.00% 88.24% 5 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.043875'
Avg. expression score for this sample: '61.3659'
Avg. expression score in LCM sample: '60.0704'
Tissue used: 'full endosperm'
AT3G01040 GAUT13 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.24113 x 10-1 2 2 50.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01040 GAUT13 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.72548 x 10-1 7 2 3 3 77.78% 50.00% 9 6 TAIR8 Avg. embryo expression (dissected): '80.136'
Avg. embryo expression (LCM): '57.355'
AT3G01040 GAUT13 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.4445 x 10-2 33 0 100.00% 33 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01040 GAUT13 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.29534 x 10-1 29 1 96.67% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01030 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01030 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01030 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G01030 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G01030 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.761831'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G01030 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01020 ISU2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01020 ISU2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G01020 ISU2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '2.16059'
Tissue used: 'full endosperm'
AT3G01020 ISU2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01020 ISU2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01020 ISU2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.6576'
Avg. expression score in LCM sample: '2.16059'
Tissue used: 'pure endosperm, no chalazal'
AT3G01015 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '22.6286'
Avg. expression score in LCM sample: '15.1536'
Tissue used: 'pure endosperm, no chalazal'
AT3G01015 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '24.681'
Avg. expression score in LCM sample: '15.1536'
Tissue used: 'full endosperm'
AT3G01015 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01015 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '20.7083'
Avg. embryo expression (LCM): '13.6637'
AT3G01015 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01015 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01010 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01010 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01010 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G01010 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G01010 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.702221'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G01010 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G48160 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.6752 x 10-1 8 6 57.14% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G48160 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.2533 x 10-1 15 17 2 7 46.88% 77.78% 32 9 TAIR8 Avg. embryo expression (dissected): '153.676'
Avg. embryo expression (LCM): '104.437'
AT2G48160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.34854 x 10-1 66 18 40 80 78.57% 66.67% 84 120 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.381609'
Avg. expression score for this sample: '158.749'
Avg. expression score in LCM sample: '93.1554'
Tissue used: 'full endosperm'
AT2G48160 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 129 53 70.88% 182 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G48160 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.9 x 10-6 177 24 88.06% 201 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G48160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 11 6 8 17 64.71% 68.00% 17 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.381609'
Avg. expression score for this sample: '151.811'
Avg. expression score in LCM sample: '93.1554'
Tissue used: 'pure endosperm, no chalazal'
AT2G48150 GPX4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G48150 GPX4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.47221'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G48150 GPX4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G48150 GPX4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.02258'
Avg. embryo expression (LCM): '1.72053'
AT2G48150 GPX4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G48150 GPX4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G48140 EDA4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G48140 EDA4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G48140 EDA4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.902869'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G48140 EDA4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '6.71029'
Avg. embryo expression (LCM): '4.42062'
AT2G48140 EDA4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '78.07'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G48140 EDA4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G48130 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G48130 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '6.57479'
Avg. embryo expression (LCM): '19.7798'
AT2G48130 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '106.375'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G48130 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G48130 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G48130 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G48120 PAC endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 24 4 17 22 85.71% 56.41% 28 39 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.655103'
Avg. expression score for this sample: '60.2728'
Avg. expression score in LCM sample: '25.4568'
Tissue used: 'full endosperm'
AT2G48120 PAC endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.54878 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G48120 PAC embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.91083 x 10-1 53 43 11 7 55.21% 38.89% 96 18 TAIR8 Avg. embryo expression (dissected): '254.24'
Avg. embryo expression (LCM): '251.172'
AT2G48120 PAC endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.47 x 10-4 30 0 100.00% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G48120 PAC endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.9965 x 10-1 16 7 3 11 69.57% 78.57% 23 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.655103'
Avg. expression score for this sample: '77.0004'
Avg. expression score in LCM sample: '25.4568'
Tissue used: 'pure endosperm, no chalazal'
AT2G48120 PAC endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.8 x 10-6 50 0 100.00% 50 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G48110 REF4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.6553 x 10-1 18 13 58.06% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G48110 REF4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.17 x 10-4 38 2 95.00% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G48110 REF4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.88877 x 10-1 8 12 3 6 40.00% 66.67% 20 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.738548'
Avg. expression score for this sample: '57.8169'
Avg. expression score in LCM sample: '28.2053'
Tissue used: 'pure endosperm, no chalazal'
AT2G48110 REF4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.21257 x 10-1 5 18 3 7 21.74% 70.00% 23 10 TAIR8 Avg. embryo expression (dissected): '107.303'
Avg. embryo expression (LCM): '46.9942'
AT2G48110 REF4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.65814 x 10-1 19 9 5 17 67.86% 77.27% 28 22 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.738548'
Avg. expression score for this sample: '47.2973'
Avg. expression score in LCM sample: '28.2053'
Tissue used: 'full endosperm'
AT2G48110 REF4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.58844 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G48100 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.42347 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G48100 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.51186 x 10-1 8 7 1 3 53.33% 75.00% 15 4 TAIR8 Avg. embryo expression (dissected): '557.562'
Avg. embryo expression (LCM): '314.14'
AT2G48100 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.66128 x 10-1 8 6 4 6 57.14% 60.00% 14 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.201785'
Avg. expression score for this sample: '241.229'
Avg. expression score in LCM sample: '124.815'
Tissue used: 'full endosperm'
AT2G48100 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.23143 x 10-1 5 3 9 5 62.50% 35.71% 8 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.201785'
Avg. expression score for this sample: '383.196'
Avg. expression score in LCM sample: '124.815'
Tissue used: 'pure endosperm, no chalazal'
AT2G48100 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.06223 x 10-1 15 5 75.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G48100 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.78561 x 10-1 13 6 68.42% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G48090 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G48090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.392071'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G48090 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G48090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.44444 x 10-1 4 0 0 1 100.00% 100.00% 4 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '5.95966'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G48090 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G48090 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G48080 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.683912'
Avg. embryo expression (LCM): '0'
AT2G48080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.110462'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G48080 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G48080 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'