Displaying data sets 97901 - 98000 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G01680 SEOR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.137409'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G01680 SEOR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G01670 SEOa endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.094097'
Avg. expression score in LCM sample: '1.07295'
Tissue used: 'pure endosperm, no chalazal'
AT3G01670 SEOa endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01670 SEOa endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.791684'
Avg. expression score in LCM sample: '1.07295'
Tissue used: 'full endosperm'
AT3G01670 SEOa endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01670 SEOa embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G01670 SEOa endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01660 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01660 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 4 4 2 9 50.00% 81.82% 8 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '35.5529'
Avg. expression score in LCM sample: '7.7311'
Tissue used: 'full endosperm'
AT3G01660 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 1 1 0 0.00% 0.00% 1 1 TAIR8 Avg. embryo expression (dissected): '67.8599'
Avg. embryo expression (LCM): '50.2343'
AT3G01660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 1 0 1 50.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '34.8327'
Avg. expression score in LCM sample: '7.7311'
Tissue used: 'pure endosperm, no chalazal'
AT3G01660 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01650 RGLG1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.75494 x 10-1 44 10 81.48% 54 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01650 RGLG1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '357.404'
Avg. embryo expression (LCM): '216.623'
AT3G01650 RGLG1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.24365 x 10-1 19 8 70.37% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01650 RGLG1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01650 RGLG1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.5439 x 10-2 9 0 5 24 100.00% 82.76% 9 29 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.035439'
Avg. expression score for this sample: '374.334'
Avg. expression score in LCM sample: '306.554'
Tissue used: 'full endosperm'
AT3G01650 RGLG1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.035439'
Avg. expression score for this sample: '377.022'
Avg. expression score in LCM sample: '306.554'
Tissue used: 'pure endosperm, no chalazal'
AT3G01640 GLCAK endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.121 x 10-3 30 2 0 8 93.75% 100.00% 32 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.8e-11'
Avg. expression score for this sample: '20.9681'
Avg. expression score in LCM sample: '8.61298'
Tissue used: 'pure endosperm, no chalazal'
AT3G01640 GLCAK endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.8 x 10-7 378 2 99.47% 380 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01640 GLCAK endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.3 x 10-8 72 8 8 92 90.00% 92.00% 80 100 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.8e-11'
Avg. expression score for this sample: '55.1366'
Avg. expression score in LCM sample: '8.61298'
Tissue used: 'full endosperm'
AT3G01640 GLCAK endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.9123 x 10-2 174 5 97.21% 179 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01640 GLCAK embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.42055 x 10-1 51 41 6 11 55.43% 64.71% 92 17 TAIR8 Avg. embryo expression (dissected): '57.8795'
Avg. embryo expression (LCM): '16.5648'
AT3G01640 GLCAK endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.7941 x 10-1 21 0 100.00% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01630 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01630 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.37258'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G01630 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '4.46495'
Avg. embryo expression (LCM): '0'
AT3G01630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.49345'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G01630 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01620 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01620 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.36301'
Avg. embryo expression (LCM): '4.20712'
AT3G01620 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01620 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '4.86415'
Avg. expression score in LCM sample: '2.95428'
Tissue used: 'full endosperm'
AT3G01620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.04556'
Avg. expression score in LCM sample: '2.95428'
Tissue used: 'pure endosperm, no chalazal'
AT3G01610 CDC48C endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '122.285'
Avg. expression score in LCM sample: '72.2256'
Tissue used: 'pure endosperm, no chalazal'
AT3G01610 CDC48C endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01610 CDC48C endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 0 2 2 100.00% 50.00% 3 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '127.317'
Avg. expression score in LCM sample: '72.2256'
Tissue used: 'full endosperm'
AT3G01610 CDC48C endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.92075 x 10-1 3 4 42.86% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01610 CDC48C embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '175.152'
Avg. embryo expression (LCM): '134.867'
AT3G01610 CDC48C endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01600 NAC044 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01600 NAC044 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.33333 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01600 NAC044 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.63085'
Avg. expression score in LCM sample: '4.51226'
Tissue used: 'full endosperm'
AT3G01600 NAC044 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3.59632'
Avg. embryo expression (LCM): '.96701'
AT3G01600 NAC044 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.18558'
Avg. expression score in LCM sample: '4.51226'
Tissue used: 'pure endosperm, no chalazal'
AT3G01600 NAC044 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01590 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.08693 x 10-1 41 10 80.39% 51 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01590 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 7 5 0 0 58.33% 12 0 TAIR8 Avg. embryo expression (dissected): '202.809'
Avg. embryo expression (LCM): '188.956'
AT3G01590 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.54893 x 10-1 35 16 68.63% 51 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01590 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.56526 x 10-1 15 2 14 38 88.24% 73.08% 17 52 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.388501'
Avg. expression score for this sample: '132.615'
Avg. expression score in LCM sample: '57.9392'
Tissue used: 'full endosperm'
AT3G01590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 4 1 4 33.33% 80.00% 6 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.388501'
Avg. expression score for this sample: '145.628'
Avg. expression score in LCM sample: '57.9392'
Tissue used: 'pure endosperm, no chalazal'
AT3G01580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 17 4 11 10 80.95% 47.62% 21 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.026739'
Avg. expression score for this sample: '12.8767'
Avg. expression score in LCM sample: '2.29287'
Tissue used: 'pure endosperm, no chalazal'
AT3G01580 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.7 x 10-8 85 0 100.00% 85 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.018 x 10-3 92 7 19 21 92.93% 52.50% 99 40 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.026739'
Avg. expression score for this sample: '33.272'
Avg. expression score in LCM sample: '2.29287'
Tissue used: 'full endosperm'
AT3G01580 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.1 x 10-7 7 21 25.00% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01580 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.41314 x 10-1 42 30 8 6 58.33% 42.86% 72 14 TAIR8 Avg. embryo expression (dissected): '34.781'
Avg. embryo expression (LCM): '46.9691'
AT3G01580 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01572 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01572 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01572 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.10777 x 10-1 10 0 1 0 100.00% 0.00% 10 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.164734'
Avg. expression score for this sample: '17.4903'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G01572 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 2 0 0 33.33% 3 0 TAIR8 Avg. embryo expression (dissected): '7.70764'
Avg. embryo expression (LCM): '0'
AT3G01572 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 0 0 0 100.00% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.164734'
Avg. expression score for this sample: '6.80747'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G01572 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01570 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.4 x 10-16 54 117 31.58% 171 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01570 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.908 x 10-3 711 1136 233 437 38.49% 65.22% 1847 670 TAIR8 Avg. embryo expression (dissected): '3275.28'
Avg. embryo expression (LCM): '304.684'
AT3G01570 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.32877 x 10-1 93 57 62.00% 150 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01570 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.3 x 10-17 803 271 74.77% 1074 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01570 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.1 x 10-28 3852 5383 1819 7508 41.71% 80.50% 9235 9327 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.0e-22'
Avg. expression score for this sample: '5362.46'
Avg. expression score in LCM sample: '244.368'
Tissue used: 'full endosperm'
AT3G01570 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.04355 x 10-1 772 772 563 1966 50.00% 77.74% 1544 2529 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.0e-22'
Avg. expression score for this sample: '3344.91'
Avg. expression score in LCM sample: '244.368'
Tissue used: 'pure endosperm, no chalazal'
AT3G01560 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.57258 x 10-1 919 417 428 820 68.79% 65.71% 1336 1248 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000085'
Avg. expression score for this sample: '582.096'
Avg. expression score in LCM sample: '208.71'
Tissue used: 'pure endosperm, no chalazal'
AT3G01560 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 3571 225 94.07% 3796 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01560 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.7 x 10-6 1742 829 412 1336 67.76% 76.43% 2571 1748 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000085'
Avg. expression score for this sample: '593.794'
Avg. expression score in LCM sample: '208.71'
Tissue used: 'full endosperm'
AT3G01560 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.2 x 10-23 1787 437 80.35% 2224 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01560 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.52515 x 10-1 821 778 365 259 51.34% 41.51% 1599 624 TAIR8 Avg. embryo expression (dissected): '795.084'
Avg. embryo expression (LCM): '148.932'
AT3G01560 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.6 x 10-7 345 79 81.37% 424 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01550 PPT2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01550 PPT2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01550 PPT2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.488665'
Avg. expression score in LCM sample: '1.98422'
Tissue used: 'full endosperm'
AT3G01550 PPT2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G01550 PPT2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.173136'
Avg. expression score in LCM sample: '1.98422'
Tissue used: 'pure endosperm, no chalazal'
AT3G01550 PPT2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01540 DRH1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.60258 x 10-1 47 20 70.15% 67 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01540 DRH1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.80129 x 10-1 10 4 4 5 71.43% 55.56% 14 9 TAIR8 Avg. embryo expression (dissected): '264.744'
Avg. embryo expression (LCM): '223.455'
AT3G01540 DRH1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.73763 x 10-1 53 10 84.13% 63 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01540 DRH1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 12 4 75.00% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01540 DRH1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.26767 x 10-1 16 9 5 19 64.00% 79.17% 25 24 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.255853'
Avg. expression score for this sample: '310.832'
Avg. expression score in LCM sample: '115.335'
Tissue used: 'full endosperm'
AT3G01540 DRH1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.94389 x 10-1 5 2 0 9 71.43% 100.00% 7 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.255853'
Avg. expression score for this sample: '197.378'
Avg. expression score in LCM sample: '115.335'
Tissue used: 'pure endosperm, no chalazal'
AT3G01530 MYB57 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G01530 MYB57 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01530 MYB57 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.472017'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G01530 MYB57 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01530 MYB57 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G01530 MYB57 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01520 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.73615 x 10-1 27 13 67.50% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G01520 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.3 x 10-5 320 158 66.95% 478 TAIR8 Mutant effect: 'N/A (not a MEG)'