GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G180605	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.138463 x 10^-1	46	26	25	15	63.89%	37.50%	72	40	RefGen V2	χ2 p-value for B73 x Mo17: '.0184221' χ2 p-value for Mo17 x B73: '.1138463' Biased in favor of strain: ''
GRMZM2G180605	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.2295 x 10^-3	41	5	20	13	89.13%	39.39%	46	33	RefGen V2	χ2 p-value for B73 x Mo17: '.0012295' χ2 p-value for Mo17 x B73: '.000889' Biased in favor of strain: 'B73'
GRMZM2G180578	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.764695 x 10^-1	105	50	65	113	67.74%	63.48%	155	178	RefGen V2	χ2 p-value for B73 x Mo17: '.7764695' χ2 p-value for Mo17 x B73: '.3675889' Biased in favor of strain: ''
GRMZM2G180578	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.79007 x 10^-2	168	139	66	95	54.72%	59.01%	307	161	RefGen V2	χ2 p-value for B73 x Mo17: '.0979007' χ2 p-value for Mo17 x B73: '.0222823' Biased in favor of strain: ''
GRMZM2G180575	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	2	6	3	75.00%	33.33%	8	9	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G180575	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		8	0	3	1	100.00%	25.00%	8	4	RefGen V2	χ2 p-value for B73 x Mo17: '.045501' χ2 p-value for Mo17 x B73: '.0770998' Biased in favor of strain: ''
GRMZM2G180568	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.955124 x 10^-1	19	10	14	46	65.52%	76.67%	29	60	RefGen V2	χ2 p-value for B73 x Mo17: '.8955124' χ2 p-value for Mo17 x B73: '.1003483' Biased in favor of strain: ''
GRMZM2G180568	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.918406 x 10^-1	50	40	20	42	55.56%	67.74%	90	62	RefGen V2	χ2 p-value for B73 x Mo17: '.2918406' χ2 p-value for Mo17 x B73: '.005206' Biased in favor of strain: ''
GRMZM2G180558	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.4237 x 10^-3	340	214	333	265	61.37%	44.31%	554	598	RefGen V2	χ2 p-value for B73 x Mo17: '8.64e-08' χ2 p-value for Mo17 x B73: '.0054237' Biased in favor of strain: 'B73'
GRMZM2G180558	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.2284 x 10^-3	229	79	215	210	74.35%	49.41%	308	425	RefGen V2	χ2 p-value for B73 x Mo17: '.0042284' χ2 p-value for Mo17 x B73: '4.49e-14' Biased in favor of strain: 'B73'
GRMZM2G180555	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.20756 x 10^-2	209	57	145	222	78.57%	60.49%	266	367	RefGen V2	χ2 p-value for B73 x Mo17: '.0000381' χ2 p-value for Mo17 x B73: '.0120756' Biased in favor of strain: ''
GRMZM2G180555	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.93 x 10^-8	341	167	231	125	67.13%	35.11%	508	356	RefGen V2	χ2 p-value for B73 x Mo17: '1.16e-14' χ2 p-value for Mo17 x B73: '1.93e-08' Biased in favor of strain: 'B73'
GRMZM2G180552	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.0582 x 10^-3	40	10	36	17	80.00%	32.08%	50	53	RefGen V2	χ2 p-value for B73 x Mo17: '.0000221' χ2 p-value for Mo17 x B73: '.0090582' Biased in favor of strain: 'B73'
GRMZM2G180552	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.28 x 10^-7	63	2	24	6	96.92%	20.00%	65	30	RefGen V2	χ2 p-value for B73 x Mo17: '2.28e-07' χ2 p-value for Mo17 x B73: '5.89e-08' Biased in favor of strain: 'B73'
GRMZM2G180519	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.795193 x 10^-1	35	14	21	16	71.43%	43.24%	49	37	RefGen V2	χ2 p-value for B73 x Mo17: '.4795193' χ2 p-value for Mo17 x B73: '.0025075' Biased in favor of strain: ''
GRMZM2G180519	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.95551 x 10^-2	47	29	41	27	61.84%	39.71%	76	68	RefGen V2	χ2 p-value for B73 x Mo17: '.0389475' χ2 p-value for Mo17 x B73: '.0895551' Biased in favor of strain: ''
GRMZM2G180509	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.961175 x 10^-1	121	115	57	96	51.27%	62.75%	236	153	RefGen V2	χ2 p-value for B73 x Mo17: '.6961175' χ2 p-value for Mo17 x B73: '.0016162' Biased in favor of strain: ''
GRMZM2G180509	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.628911 x 10^-1	229	107	139	316	68.15%	69.45%	336	455	RefGen V2	χ2 p-value for B73 x Mo17: '.5628911' χ2 p-value for Mo17 x B73: '.2077824' Biased in favor of strain: ''
GRMZM2G180490	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G180490	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.335653 x 10^-1	99	131	124	134	43.04%	51.94%	230	258	RefGen V2	χ2 p-value for B73 x Mo17: '.0348568' χ2 p-value for Mo17 x B73: '.5335653' Biased in favor of strain: ''
GRMZM2G180471	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.815113 x 10^-1	20	28	25	27	41.67%	51.92%	48	52	RefGen V2	χ2 p-value for B73 x Mo17: '.2482131' χ2 p-value for Mo17 x B73: '.7815113' Biased in favor of strain: ''
GRMZM2G180471	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.875554 x 10^-1	17	8	13	19	68.00%	59.38%	25	32	RefGen V2	χ2 p-value for B73 x Mo17: '.8875554' χ2 p-value for Mo17 x B73: '.3815737' Biased in favor of strain: ''
GRMZM2G180458	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.26 x 10^-7	512	157	267	354	76.53%	57.00%	669	621	RefGen V2	χ2 p-value for B73 x Mo17: '6.20e-08' χ2 p-value for Mo17 x B73: '3.26e-07' Biased in favor of strain: 'B73'
GRMZM2G180458	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.79 x 10^-7	610	369	500	348	62.31%	41.04%	979	848	RefGen V2	χ2 p-value for B73 x Mo17: '1.34e-14' χ2 p-value for Mo17 x B73: '1.79e-07' Biased in favor of strain: 'B73'
GRMZM2G180452	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.74847 x 10^-2	39	63	28	74	38.24%	72.55%	102	102	RefGen V2	χ2 p-value for B73 x Mo17: '.0174847' χ2 p-value for Mo17 x B73: '5.25e-06' Biased in favor of strain: 'Mo17'
GRMZM2G180452	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.679482 x 10^-1	25	8	35	50	75.76%	58.82%	33	85	RefGen V2	χ2 p-value for B73 x Mo17: '.2679482' χ2 p-value for Mo17 x B73: '.1250468' Biased in favor of strain: ''
GRMZM2G180430	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.75 x 10^-17	160	4	75	17	97.56%	18.48%	164	92	RefGen V2	χ2 p-value for B73 x Mo17: '4.75e-17' χ2 p-value for Mo17 x B73: '1.07e-22' Biased in favor of strain: 'B73'
GRMZM2G180430	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.1 x 10^-8	264	148	273	146	64.08%	34.84%	412	419	RefGen V2	χ2 p-value for B73 x Mo17: '1.10e-08' χ2 p-value for Mo17 x B73: '5.49e-10' Biased in favor of strain: 'B73'
GRMZM2G180422	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2297	879	2246	967	72.32%	30.10%	3176	3213	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G180422	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.26 x 10^-11	504	128	304	361	79.75%	54.29%	632	665	RefGen V2	χ2 p-value for B73 x Mo17: '3.05e-12' χ2 p-value for Mo17 x B73: '1.26e-11' Biased in favor of strain: 'B73'
GRMZM2G180418	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.935357 x 10^-1	144	65	86	132	68.90%	60.55%	209	218	RefGen V2	χ2 p-value for B73 x Mo17: '.4935357' χ2 p-value for Mo17 x B73: '.0554092' Biased in favor of strain: ''
GRMZM2G180418	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.39548 x 10^-2	85	58	76	49	59.44%	39.20%	143	125	RefGen V2	χ2 p-value for B73 x Mo17: '.0239548' χ2 p-value for Mo17 x B73: '.0157372' Biased in favor of strain: 'B73'
GRMZM2G180406	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.89 x 10^-9	470	303	490	316	60.80%	39.21%	773	806	RefGen V2	χ2 p-value for B73 x Mo17: '1.89e-09' χ2 p-value for Mo17 x B73: '8.85e-10' Biased in favor of strain: 'B73'
GRMZM2G180406	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.4098 x 10^-3	889	371	447	714	70.56%	61.50%	1260	1161	RefGen V2	χ2 p-value for B73 x Mo17: '.0034098' χ2 p-value for Mo17 x B73: '.0001874' Biased in favor of strain: 'B73'
GRMZM2G180399	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.170748 x 10^-1	20	7	12	20	74.07%	62.50%	27	32	RefGen V2	χ2 p-value for B73 x Mo17: '.4142287' χ2 p-value for Mo17 x B73: '.6170748' Biased in favor of strain: ''
GRMZM2G180399	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.32 x 10^-6	169	91	184	58	65.00%	23.97%	260	242	RefGen V2	χ2 p-value for B73 x Mo17: '1.32e-06' χ2 p-value for Mo17 x B73: '5.51e-16' Biased in favor of strain: 'B73'
GRMZM2G180384	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.23 x 10^-8	78	13	48	7	85.71%	12.73%	91	55	RefGen V2	χ2 p-value for B73 x Mo17: '9.50e-12' χ2 p-value for Mo17 x B73: '3.23e-08' Biased in favor of strain: 'B73'
GRMZM2G180384	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.03 x 10^-11	120	8	70	16	93.75%	18.60%	128	86	RefGen V2	χ2 p-value for B73 x Mo17: '8.03e-11' χ2 p-value for Mo17 x B73: '3.23e-21' Biased in favor of strain: 'B73'
GRMZM2G180372	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.3 x 10^-15	394	77	206	126	83.65%	37.95%	471	332	RefGen V2	χ2 p-value for B73 x Mo17: '5.30e-15' χ2 p-value for Mo17 x B73: '1.27e-28' Biased in favor of strain: 'B73'
GRMZM2G180372	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.56 x 10^-5	159	46	112	56	77.56%	33.33%	205	168	RefGen V2	χ2 p-value for B73 x Mo17: '2.97e-15' χ2 p-value for Mo17 x B73: '.0000156' Biased in favor of strain: 'B73'
GRMZM2G180335	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.23 x 10^-14	588	350	538	313	62.69%	36.78%	938	851	RefGen V2	χ2 p-value for B73 x Mo17: '7.79e-15' χ2 p-value for Mo17 x B73: '1.23e-14' Biased in favor of strain: 'B73'
GRMZM2G180335	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.16 x 10^-10	712	219	516	602	76.48%	53.85%	931	1118	RefGen V2	χ2 p-value for B73 x Mo17: '2.16e-10' χ2 p-value for Mo17 x B73: '9.59e-20' Biased in favor of strain: 'B73'
GRMZM2G180330	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G180330	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	3	1	15	0.00%	93.75%	3	16	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.0004653' Biased in favor of strain: ''
GRMZM2G180328	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.77796 x 10^-2	11	3	2	8	78.57%	80.00%	14	10	RefGen V2	χ2 p-value for B73 x Mo17: '.0325094' χ2 p-value for Mo17 x B73: '.0577796' Biased in favor of strain: ''
GRMZM2G180328	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.927399 x 10^-1	48	20	17	21	70.59%	55.26%	68	38	RefGen V2	χ2 p-value for B73 x Mo17: '.4927399' χ2 p-value for Mo17 x B73: '.1359083' Biased in favor of strain: ''
GRMZM2G180324	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	3		100.00%	0	3	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G180324	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	1	0	100.00%	0.00%	2	1	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G180283	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	4	1		20.00%	0	5	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.1797125' Biased in favor of strain: ''
GRMZM2G180283	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	0	100.00%		1	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G180262	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		27	0	6	0	100.00%	0.00%	27	6	RefGen V2	χ2 p-value for B73 x Mo17: '.0002386' χ2 p-value for Mo17 x B73: '.000532' Biased in favor of strain: ''
GRMZM2G180262	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		8	9	6	1	47.06%	14.29%	17	7	RefGen V2	χ2 p-value for B73 x Mo17: '.8083652' χ2 p-value for Mo17 x B73: '.0587817' Biased in favor of strain: ''
GRMZM2G180258	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.18 x 10^-11	46	0	71	0	100.00%	0.00%	46	71	RefGen V2	χ2 p-value for B73 x Mo17: '1.18e-11' χ2 p-value for Mo17 x B73: '3.57e-17' Biased in favor of strain: 'B73'
GRMZM2G180258	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		12	0	2	0	100.00%	0.00%	12	2	RefGen V2	χ2 p-value for B73 x Mo17: '.0143062' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: ''
GRMZM2G180246	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	3	3	1	66.67%	25.00%	9	4	RefGen V2	χ2 p-value for B73 x Mo17: '.9999862' χ2 p-value for Mo17 x B73: '.0770998' Biased in favor of strain: ''
GRMZM2G180246	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.05152 x 10^-2	17	5	19	3	77.27%	13.64%	22	22	RefGen V2	χ2 p-value for B73 x Mo17: '.0105152' χ2 p-value for Mo17 x B73: '.0006467' Biased in favor of strain: 'B73'
GRMZM2G180211	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	9	9	11	9	50.00%	45.00%	18	20	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: ''
GRMZM2G180211	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.316724 x 10^-1	18	4	3	18	81.82%	85.71%	22	21	RefGen V2	χ2 p-value for B73 x Mo17: '.1316724' χ2 p-value for Mo17 x B73: '.0640775' Biased in favor of strain: ''
GRMZM2G180195	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.7451 x 10^-3	24	0	8	2	100.00%	20.00%	24	10	RefGen V2	χ2 p-value for B73 x Mo17: '.000532' χ2 p-value for Mo17 x B73: '.0017451' Biased in favor of strain: 'B73'
GRMZM2G180195	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.466 x 10^-4	18	2	22	2	90.00%	8.33%	20	24	RefGen V2	χ2 p-value for B73 x Mo17: '.0003466' χ2 p-value for Mo17 x B73: '.0000446' Biased in favor of strain: 'B73'
GRMZM2G180190	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	4	6	7	55.56%	53.85%	9	13	RefGen V2	χ2 p-value for B73 x Mo17: '.7388827' χ2 p-value for Mo17 x B73: '.7815113' Biased in favor of strain: ''
GRMZM2G180190	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	2	0	100.00%	0.00%	1	2	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: ''
GRMZM2G180160	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G180160	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.26323 x 10^-2	29	16	48	24	64.44%	33.33%	45	72	RefGen V2	χ2 p-value for B73 x Mo17: '.0526323' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: ''
GRMZM2G180155	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.518296 x 10^-1	19	21	11	25	47.50%	69.44%	40	36	RefGen V2	χ2 p-value for B73 x Mo17: '.7518296' χ2 p-value for Mo17 x B73: '.0196307' Biased in favor of strain: ''
GRMZM2G180155	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.074565 x 10^-1	33	19	12	25	63.46%	67.57%	52	37	RefGen V2	χ2 p-value for B73 x Mo17: '.6239032' χ2 p-value for Mo17 x B73: '.9074565' Biased in favor of strain: ''
GRMZM2G180122	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	0	1	100.00%	100.00%	4	1	RefGen V2	χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G180122	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.270892 x 10^-1	6	4	4	14	60.00%	77.78%	10	18	RefGen V2	χ2 p-value for B73 x Mo17: '.5270892' χ2 p-value for Mo17 x B73: '.0184221' Biased in favor of strain: ''
GRMZM2G180086	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.173105 x 10^-1	24	11	10	6	68.57%	37.50%	35	16	RefGen V2	χ2 p-value for B73 x Mo17: '.0279918' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G180086	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	1	5	4	87.50%	44.44%	8	9	RefGen V2	χ2 p-value for B73 x Mo17: '.2113029' χ2 p-value for Mo17 x B73: '.1572991' Biased in favor of strain: ''
GRMZM2G180080	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G180080	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.637029 x 10^-1	6	10	5	7	37.50%	58.33%	16	12	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: ''
GRMZM2G180071	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	1	100.00%	100.00%	1	1	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G180071	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	5	3	100.00%	37.50%	3	8	RefGen V2	χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.0801183' Biased in favor of strain: ''
GRMZM2G180065	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.0041 x 10^-3	333	120	257	246	73.51%	48.91%	453	503	RefGen V2	χ2 p-value for B73 x Mo17: '.0020041' χ2 p-value for Mo17 x B73: '2.92e-17' Biased in favor of strain: 'B73'
GRMZM2G180065	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.64 x 10^-6	529	303	477	340	63.58%	41.62%	832	817	RefGen V2	χ2 p-value for B73 x Mo17: '4.68e-15' χ2 p-value for Mo17 x B73: '1.64e-06' Biased in favor of strain: 'B73'
GRMZM2G180060	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	3	1	5	25.00%	83.33%	4	6	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.1024704' Biased in favor of strain: ''
GRMZM2G180060	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	0	0	100.00%		4	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G180054	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.403009 x 10^-1	9	3	11	4	75.00%	26.67%	12	15	RefGen V2	χ2 p-value for B73 x Mo17: '.5403009' χ2 p-value for Mo17 x B73: '.001015' Biased in favor of strain: ''
GRMZM2G180054	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		12	6	5	3	66.67%	37.50%	18	8	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G180027	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.56 x 10^-6	103	44	90	37	70.07%	29.13%	147	127	RefGen V2	χ2 p-value for B73 x Mo17: '1.14e-06' χ2 p-value for Mo17 x B73: '2.56e-06' Biased in favor of strain: 'B73'
GRMZM2G180027	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.6366 x 10^-3	26	3	29	13	89.66%	30.95%	29	42	RefGen V2	χ2 p-value for B73 x Mo17: '.0086366' χ2 p-value for Mo17 x B73: '9.11e-07' Biased in favor of strain: 'B73'
GRMZM2G180021	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.405 x 10^-4	874	355	332	477	71.11%	58.96%	1229	809	RefGen V2	χ2 p-value for B73 x Mo17: '.0009405' χ2 p-value for Mo17 x B73: '3.34e-06' Biased in favor of strain: 'B73'
GRMZM2G180021	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1060	405	1087	519	72.35%	32.32%	1465	1606	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G180011	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.2667 x 10^-3	31	5	19	5	86.11%	20.83%	36	24	RefGen V2	χ2 p-value for B73 x Mo17: '.0000147' χ2 p-value for Mo17 x B73: '.0042667' Biased in favor of strain: 'B73'
GRMZM2G180011	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.68 x 10^-12	189	22	206	27	89.57%	11.59%	211	233	RefGen V2	χ2 p-value for B73 x Mo17: '1.68e-12' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G180004	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.138462 x 10^-1	9	11	10	10	45.00%	50.00%	20	20	RefGen V2	χ2 p-value for B73 x Mo17: '.0398299' χ2 p-value for Mo17 x B73: '.1138462' Biased in favor of strain: ''
GRMZM2G180004	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.912971 x 10^-1	8	11	2	11	42.11%	84.62%	19	13	RefGen V2	χ2 p-value for B73 x Mo17: '.4912971' χ2 p-value for Mo17 x B73: '.0125549' Biased in favor of strain: ''
GRMZM2G179985	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.346 x 10^-3	882	763	728	925	53.62%	55.96%	1645	1653	RefGen V2	χ2 p-value for B73 x Mo17: '.003346' χ2 p-value for Mo17 x B73: '1.26e-06' Biased in favor of strain: ''
GRMZM2G179985	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.152176 x 10^-1	2566	1261	1248	2827	67.05%	69.37%	3827	4075	RefGen V2	χ2 p-value for B73 x Mo17: '.6152176' χ2 p-value for Mo17 x B73: '.0002459' Biased in favor of strain: ''
GRMZM2G179976	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.8927 x 10^-3	46	8	38	39	85.19%	50.65%	54	77	RefGen V2	χ2 p-value for B73 x Mo17: '.0038927' χ2 p-value for Mo17 x B73: '.002868' Biased in favor of strain: 'B73'
GRMZM2G179976	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.3158 x 10^-3	66	22	40	17	75.00%	29.82%	88	57	RefGen V2	χ2 p-value for B73 x Mo17: '2.73e-06' χ2 p-value for Mo17 x B73: '.0023158' Biased in favor of strain: 'B73'
GRMZM2G179907	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.254423 x 10^-1	55	43	63	41	56.12%	39.42%	98	104	RefGen V2	χ2 p-value for B73 x Mo17: '.2254423' χ2 p-value for Mo17 x B73: '.030984' Biased in favor of strain: ''
GRMZM2G179907	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	0	0	100.00%		4	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G179906	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.89 x 10^-6	453	143	193	251	76.01%	56.53%	596	444	RefGen V2	χ2 p-value for B73 x Mo17: '1.32e-06' χ2 p-value for Mo17 x B73: '5.89e-06' Biased in favor of strain: 'B73'
GRMZM2G179906	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.23 x 10^-16	772	397	774	488	66.04%	38.67%	1169	1262	RefGen V2	χ2 p-value for B73 x Mo17: '5.45e-28' χ2 p-value for Mo17 x B73: '8.23e-16' Biased in favor of strain: 'B73'
GRMZM2G179848	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.39 x 10^-7	126	57	112	28	68.85%	20.00%	183	140	RefGen V2	χ2 p-value for B73 x Mo17: '3.39e-07' χ2 p-value for Mo17 x B73: '1.25e-12' Biased in favor of strain: 'B73'
GRMZM2G179848	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.14234 x 10^-2	38	4	13	13	90.48%	50.00%	42	26	RefGen V2	χ2 p-value for B73 x Mo17: '.0010632' χ2 p-value for Mo17 x B73: '.0714234' Biased in favor of strain: ''
GRMZM2G179827	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G179827	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		15	3	2	6	83.33%	75.00%	18	8	RefGen V2	χ2 p-value for B73 x Mo17: '.0046777' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''

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