| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT3G01830 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.55184 x 10-1 | 5 | 0 | 100.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G01830 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.42475 x 10-1 | 4 | 0 | 100.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G01830 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Avg. embryo expression (dissected): '1.61439' Avg. embryo expression (LCM): '0' |
|||||
| AT3G01830 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G01830 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 7 | 0 | 6 | 8 | 100.00% | 57.14% | 7 | 14 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '12.2066' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||
| AT3G01830 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.237641' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT3G01820 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '20.3547' Avg. expression score in LCM sample: '15.8003' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT3G01820 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G01820 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 4 | 0 | 2 | 2 | 100.00% | 50.00% | 4 | 4 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '43.8361' Avg. expression score in LCM sample: '15.8003' Tissue used: 'full endosperm' |
|||||
| AT3G01820 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 4 | 1 | 80.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G01820 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G01820 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | TAIR8 |
Avg. embryo expression (dissected): '24.6407' Avg. embryo expression (LCM): '28.1312' |
|||||
| AT3G01810 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.69417 x 10-1 | 184 | 134 | 62 | 39 | 57.86% | 38.61% | 318 | 101 | TAIR8 |
Avg. embryo expression (dissected): '122.404' Avg. embryo expression (LCM): '122.697' |
||||
| AT3G01810 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.93513 x 10-1 | 327 | 220 | 137 | 447 | 59.78% | 76.54% | 547 | 584 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.735065' Avg. expression score for this sample: '141.602' Avg. expression score in LCM sample: '49.1057' Tissue used: 'full endosperm' |
|||||
| AT3G01810 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.41902 x 10-1 | 98 | 39 | 71.53% | 137 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G01810 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.7 x 10-22 | 225 | 13 | 94.54% | 238 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G01810 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.35782 x 10-1 | 146 | 109 | 57 | 156 | 57.25% | 73.24% | 255 | 213 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.735065' Avg. expression score for this sample: '93.5432' Avg. expression score in LCM sample: '49.1057' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT3G01810 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.2 x 10-10 | 96 | 6 | 94.12% | 102 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G01800 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 136 | 49 | 73.51% | 185 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G01800 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.7 x 10-7 | 256 | 24 | 91.43% | 280 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G01800 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 40 | 33 | 12 | 4 | 54.79% | 25.00% | 73 | 16 | TAIR8 |
Avg. embryo expression (dissected): '47.9801' Avg. embryo expression (LCM): '100.318' |
||||
| AT3G01800 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.7535 x 10-2 | 15 | 1 | 93.75% | 16 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G01800 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.80139 x 10-1 | 57 | 13 | 21 | 43 | 81.43% | 67.19% | 70 | 64 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.181759' Avg. expression score for this sample: '31.573' Avg. expression score in LCM sample: '6.52587' Tissue used: 'full endosperm' |
|||||
| AT3G01800 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.39854 x 10-1 | 21 | 12 | 5 | 18 | 63.64% | 78.26% | 33 | 23 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.181759' Avg. expression score for this sample: '18.9332' Avg. expression score in LCM sample: '6.52587' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT3G01790 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.9858 x 10-2 | 27 | 3 | 90.00% | 30 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G01790 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.37186 x 10-1 | 1 | 2 | 3 | 3 | 33.33% | 50.00% | 3 | 6 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '269.699' Avg. expression score in LCM sample: '103.797' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT3G01790 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 14 | 7 | 8 | 20 | 66.67% | 71.43% | 21 | 28 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '426.836' Avg. expression score in LCM sample: '103.797' Tissue used: 'full endosperm' |
|||||
| AT3G01790 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0002 | 28 | 0 | 100.00% | 28 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G01790 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.40761 x 10-1 | 6 | 6 | 50.00% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G01790 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.32415 x 10-1 | 5 | 21 | 2 | 5 | 19.23% | 71.43% | 26 | 7 | TAIR8 |
Avg. embryo expression (dissected): '739.109' Avg. embryo expression (LCM): '828.175' |
||||
| AT3G01780 | TPLATE | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.30904 x 10-1 | 119 | 102 | 47 | 43 | 53.85% | 47.78% | 221 | 90 | TAIR8 |
Avg. embryo expression (dissected): '385.224' Avg. embryo expression (LCM): '243.536' |
|||
| AT3G01780 | TPLATE | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.1 x 10-6 | 576 | 207 | 165 | 521 | 73.56% | 75.95% | 783 | 686 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '2.8e-06' Avg. expression score for this sample: '521.252' Avg. expression score in LCM sample: '270.001' Tissue used: 'full endosperm' |
||||
| AT3G01780 | TPLATE | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.265 x 10-2 | 127 | 32 | 79.87% | 159 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G01780 | TPLATE | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.6 x 10-11 | 724 | 140 | 83.80% | 864 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G01780 | TPLATE | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.4334 x 10-2 | 387 | 177 | 158 | 399 | 68.62% | 71.63% | 564 | 557 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '2.8e-06' Avg. expression score for this sample: '680.034' Avg. expression score in LCM sample: '270.001' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT3G01780 | TPLATE | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 9.1 x 10-7 | 645 | 149 | 81.23% | 794 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G01770 | BET10 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.6 x 10-27 | 33 | 110 | 23.08% | 143 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G01770 | BET10 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.5997 x 10-2 | 182 | 4 | 53 | 6 | 97.85% | 10.17% | 186 | 59 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.027368' Avg. expression score for this sample: '301.48' Avg. expression score in LCM sample: '90.936' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT3G01770 | BET10 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.0 x 10-30 | 307 | 2 | 99.35% | 309 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G01770 | BET10 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.4 x 10-6 | 111 | 3 | 29 | 1 | 97.37% | 3.33% | 114 | 30 | TAIR8 |
Avg. embryo expression (dissected): '272.781' Avg. embryo expression (LCM): '151.544' |
|||
| AT3G01770 | BET10 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.56191 x 10-1 | 5 | 3 | 62.50% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G01770 | BET10 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.4338 x 10-1 | 205 | 1 | 95 | 17 | 99.51% | 15.18% | 206 | 112 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.027368' Avg. expression score for this sample: '374.854' Avg. expression score in LCM sample: '90.936' Tissue used: 'full endosperm' |
||||
| AT3G01760 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.495403' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT3G01760 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G01760 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G01760 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.202597' Avg. embryo expression (LCM): '0' |
||||||
| AT3G01760 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.360725' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT3G01760 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G01750 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.90677 x 10-1 | 3 | 2 | 60.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G01750 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.76471 x 10-1 | 4 | 0 | 1 | 4 | 100.00% | 80.00% | 4 | 5 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.443017' Avg. expression score for this sample: '6.40481' Avg. expression score in LCM sample: '25.3833' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT3G01750 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.2381 x 10-1 | 1 | 3 | 1 | 0 | 25.00% | 0.00% | 4 | 1 | TAIR8 |
Avg. embryo expression (dissected): '2.69098' Avg. embryo expression (LCM): '1.88379' |
||||
| AT3G01750 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 6 | 1 | 1 | 1 | 85.71% | 50.00% | 7 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.443017' Avg. expression score for this sample: '2.07489' Avg. expression score in LCM sample: '25.3833' Tissue used: 'full endosperm' |
|||||
| AT3G01750 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G01750 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.39113 x 10-1 | 3 | 3 | 50.00% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G01740 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.8 x 10-7 | 139 | 7 | 95.21% | 146 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G01740 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 9.6284 x 10-2 | 51 | 25 | 8 | 5 | 67.11% | 38.46% | 76 | 13 | TAIR8 |
Avg. embryo expression (dissected): '269.155' Avg. embryo expression (LCM): '315.886' |
||||
| AT3G01740 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 20 | 5 | 80.00% | 25 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G01740 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.8439 x 10-2 | 72 | 7 | 28 | 57 | 91.14% | 67.06% | 79 | 85 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.014473' Avg. expression score for this sample: '168.194' Avg. expression score in LCM sample: '104.091' Tissue used: 'full endosperm' |
|||||
| AT3G01740 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.08568 x 10-1 | 87 | 36 | 70.73% | 123 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G01740 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.4223 x 10-1 | 39 | 9 | 16 | 31 | 81.25% | 65.96% | 48 | 47 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.014473' Avg. expression score for this sample: '223.152' Avg. expression score in LCM sample: '104.091' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT3G01730 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '1.1954' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT3G01730 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT3G01730 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G01730 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G01730 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '1.35348' Avg. embryo expression (LCM): '0' |
||||||
| AT3G01730 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G01720 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.9 x 10-16 | 258 | 32 | 88.97% | 290 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G01720 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.03295 x 10-1 | 155 | 52 | 98 | 101 | 74.88% | 50.75% | 207 | 199 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.687846' Avg. expression score for this sample: '96.2403' Avg. expression score in LCM sample: '68.3747' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT3G01720 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.116 x 10-3 | 132 | 63 | 28 | 21 | 67.69% | 42.86% | 195 | 49 | TAIR8 |
Avg. embryo expression (dissected): '96.2076' Avg. embryo expression (LCM): '51.3897' |
||||
| AT3G01720 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.66038 x 10-1 | 280 | 75 | 159 | 201 | 78.87% | 55.83% | 355 | 360 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.687846' Avg. expression score for this sample: '158.613' Avg. expression score in LCM sample: '68.3747' Tissue used: 'full endosperm' |
|||||
| AT3G01720 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.31031 x 10-1 | 58 | 23 | 71.60% | 81 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G01720 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 367 | 16 | 95.82% | 383 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G01710 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.34769 x 10-1 | 5 | 0 | 100.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G01710 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.45232 x 10-1 | 9 | 22 | 3 | 4 | 29.03% | 57.14% | 31 | 7 | TAIR8 |
Avg. embryo expression (dissected): '54.4609' Avg. embryo expression (LCM): '95.9978' |
||||
| AT3G01710 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.34769 x 10-1 | 5 | 0 | 100.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G01710 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 1 | 3 | 2 | 5 | 25.00% | 71.43% | 4 | 7 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '7.46692' Avg. expression score in LCM sample: '8.36311' Tissue used: 'full endosperm' |
|||||
| AT3G01710 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 1 | 50.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G01710 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 3 | 1 | 1 | 1 | 75.00% | 50.00% | 4 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '6.18367' Avg. expression score in LCM sample: '8.36311' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT3G01705 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT3G01705 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT3G01705 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G01705 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G01705 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT3G01705 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G01700 | AGP11 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G01700 | AGP11 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '48.4547' Avg. expression score in LCM sample: '3.90965' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT3G01700 | AGP11 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '32.3512' Avg. embryo expression (LCM): '0' |
|||||
| AT3G01700 | AGP11 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 1 | 1 | 0 | 0 | 50.00% | 2 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '3.96168' Avg. expression score in LCM sample: '3.90965' Tissue used: 'full endosperm' |
|||||
| AT3G01700 | AGP11 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G01700 | AGP11 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G01690 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.8 x 10-14 | 203 | 3 | 98.54% | 206 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G01690 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.408 x 10-3 | 148 | 67 | 20 | 7 | 68.84% | 25.93% | 215 | 27 | TAIR8 |
Avg. embryo expression (dissected): '266.097' Avg. embryo expression (LCM): '155.161' |
||||
| AT3G01690 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.19001 x 10-1 | 63 | 10 | 86.30% | 73 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G01690 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.7 x 10-10 | 141 | 16 | 70 | 302 | 89.81% | 81.18% | 157 | 372 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1.2e-08' Avg. expression score for this sample: '218.812' Avg. expression score in LCM sample: '28.0877' Tissue used: 'full endosperm' |
|||||
| AT3G01690 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.3 x 10-10 | 292 | 18 | 94.19% | 310 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G01690 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.42044 x 10-1 | 127 | 16 | 59 | 56 | 88.81% | 48.70% | 143 | 115 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1.2e-08' Avg. expression score for this sample: '226.588' Avg. expression score in LCM sample: '28.0877' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT3G01680 | SEOR1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT3G01680 | SEOR1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.137409' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
||||||
| AT3G01680 | SEOR1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G01680 | SEOR1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' |