Displaying data sets 97601 - 97700 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G02140 TMAC2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.90255 x 10-1 204 4 98.08% 208 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02140 TMAC2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 81 2 8 415 97.59% 98.11% 83 423 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '508.841'
Avg. expression score in LCM sample: '2.41046'
Tissue used: 'full endosperm'
AT3G02130 RPK2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '112.456'
Avg. expression score in LCM sample: '30.557'
Tissue used: 'full endosperm'
AT3G02130 RPK2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02130 RPK2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02130 RPK2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '114.874'
Avg. embryo expression (LCM): '61.9515'
AT3G02130 RPK2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02130 RPK2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '54.4423'
Avg. expression score in LCM sample: '30.557'
Tissue used: 'pure endosperm, no chalazal'
AT3G02125 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.596708'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G02125 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02125 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02125 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02125 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '15.6582'
Avg. embryo expression (LCM): '.96701'
AT3G02125 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.36235'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G02120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '59.7415'
Avg. expression score in LCM sample: '78.9278'
Tissue used: 'full endosperm'
AT3G02120 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '430.788'
Avg. embryo expression (LCM): '300.012'
AT3G02120 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '63.0275'
Avg. expression score in LCM sample: '78.9278'
Tissue used: 'pure endosperm, no chalazal'
AT3G02120 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02120 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02110 scpl25 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.3333 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02110 scpl25 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.5227 x 10-1 10 4 71.43% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02110 scpl25 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.64257 x 10-1 70 50 19 16 58.33% 45.71% 120 35 TAIR8 Avg. embryo expression (dissected): '230.499'
Avg. embryo expression (LCM): '265.878'
AT3G02110 scpl25 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.9477 x 10-2 21 2 91.30% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02110 scpl25 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.6749 x 10-1 18 3 4 5 85.71% 55.56% 21 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.208525'
Avg. expression score for this sample: '19.1837'
Avg. expression score in LCM sample: '1.79315'
Tissue used: 'pure endosperm, no chalazal'
AT3G02110 scpl25 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.44184 x 10-1 32 5 12 16 86.49% 57.14% 37 28 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.208525'
Avg. expression score for this sample: '22.0161'
Avg. expression score in LCM sample: '1.79315'
Tissue used: 'full endosperm'
AT3G02100 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 2 1 100.00% 33.33% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.41999'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G02100 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 2 100.00% 100.00% 2 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.23104'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G02100 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02100 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02100 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.33333 x 10-1 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02100 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 5.2381 x 10-1 1 4 0 0 20.00% 5 0 TAIR8 Avg. embryo expression (dissected): '2.52954'
Avg. embryo expression (LCM): '4.50853'
AT3G02090 MPPBETA embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.6546 x 10-1 50 36 6 13 58.14% 68.42% 86 19 TAIR8 Avg. embryo expression (dissected): '663.093'
Avg. embryo expression (LCM): '757.684'
AT3G02090 MPPBETA endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.4 x 10-7 404 48 89.38% 452 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02090 MPPBETA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.48533 x 10-1 53 10 18 37 84.13% 67.27% 63 55 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001372'
Avg. expression score for this sample: '419.082'
Avg. expression score in LCM sample: '546.41'
Tissue used: 'pure endosperm, no chalazal'
AT3G02090 MPPBETA endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.51685 x 10-1 33 11 75.00% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02090 MPPBETA endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.5812 x 10-2 315 130 70.79% 445 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02090 MPPBETA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.448 x 10-3 104 26 45 133 80.00% 74.72% 130 178 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001372'
Avg. expression score for this sample: '548.446'
Avg. expression score in LCM sample: '546.41'
Tissue used: 'full endosperm'
AT3G02080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1338.06'
Avg. expression score in LCM sample: '643.842'
Tissue used: 'full endosperm'
AT3G02080 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02080 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02080 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3155.86'
Avg. embryo expression (LCM): '4207.68'
AT3G02080 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1235.33'
Avg. expression score in LCM sample: '643.842'
Tissue used: 'pure endosperm, no chalazal'
AT3G02070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 13 6 6 11 68.42% 64.71% 19 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.5e-06'
Avg. expression score for this sample: '27.1576'
Avg. expression score in LCM sample: '15.5798'
Tissue used: 'pure endosperm, no chalazal'
AT3G02070 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3 x 10-8 284 6 97.93% 290 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02070 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.3394 x 10-2 92 31 74.80% 123 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02070 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.47656 x 10-1 21 2 91.30% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02070 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 26 30 6 8 46.43% 57.14% 56 14 TAIR8 Avg. embryo expression (dissected): '57.0155'
Avg. embryo expression (LCM): '32.1751'
AT3G02070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.1 x 10-7 112 17 11 89 86.82% 89.00% 129 100 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.5e-06'
Avg. expression score for this sample: '74.8562'
Avg. expression score in LCM sample: '15.5798'
Tissue used: 'full endosperm'
AT3G02065 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.29 x 10-4 279 75 99 258 78.81% 72.27% 354 357 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000161'
Avg. expression score for this sample: '252.616'
Avg. expression score in LCM sample: '144.098'
Tissue used: 'full endosperm'
AT3G02065 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.34694 x 10-1 139 104 38 29 57.20% 43.28% 243 67 TAIR8 Avg. embryo expression (dissected): '275.149'
Avg. embryo expression (LCM): '224.861'
AT3G02065 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2 x 10-11 463 64 87.86% 527 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02065 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.34003 x 10-1 211 73 72 147 74.30% 67.12% 284 219 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000161'
Avg. expression score for this sample: '255.435'
Avg. expression score in LCM sample: '144.098'
Tissue used: 'pure endosperm, no chalazal'
AT3G02065 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 41 14 74.55% 55 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02065 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.3559 x 10-1 367 108 77.26% 475 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02060 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.493 x 10-3 22 19 53.66% 41 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02060 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.00408 x 10-1 115 30 79.31% 145 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02060 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.77192 x 10-1 46 44 2 17 51.11% 89.47% 90 19 TAIR8 Avg. embryo expression (dissected): '29.2075'
Avg. embryo expression (LCM): '66.6233'
AT3G02060 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.175 x 10-3 38 1 97.44% 39 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.73366 x 10-1 32 15 16 24 68.09% 60.00% 47 40 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002908'
Avg. expression score for this sample: '17.1782'
Avg. expression score in LCM sample: '8.61298'
Tissue used: 'pure endosperm, no chalazal'
AT3G02060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.8 x 10-5 132 13 15 27 91.03% 64.29% 145 42 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002908'
Avg. expression score for this sample: '31.1702'
Avg. expression score in LCM sample: '8.61298'
Tissue used: 'full endosperm'
AT3G02050 KUP3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.8659 x 10-2 168 49 117 271 77.42% 69.85% 217 388 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.186934'
Avg. expression score for this sample: '562.031'
Avg. expression score in LCM sample: '802.815'
Tissue used: 'full endosperm'
AT3G02050 KUP3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.39575 x 10-1 209 81 93 122 72.07% 56.74% 290 215 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.186934'
Avg. expression score for this sample: '840.657'
Avg. expression score in LCM sample: '802.815'
Tissue used: 'pure endosperm, no chalazal'
AT3G02050 KUP3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 463 17 96.46% 480 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02050 KUP3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 274 0 100.00% 274 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02050 KUP3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.24511 x 10-1 34 8 80.95% 42 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02050 KUP3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.30728 x 10-1 52 58 14 27 47.27% 65.85% 110 41 TAIR8 Avg. embryo expression (dissected): '344.211'
Avg. embryo expression (LCM): '244.829'
AT3G02040 SRG3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.45455 x 10-1 4 0 1 1 100.00% 50.00% 4 2 TAIR8 Avg. embryo expression (dissected): '32.4474'
Avg. embryo expression (LCM): '16.502'
AT3G02040 SRG3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 23 10 69.70% 33 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02040 SRG3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 5 1 1 3 83.33% 75.00% 6 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '27.7136'
Avg. expression score in LCM sample: '20.2831'
Tissue used: 'pure endosperm, no chalazal'
AT3G02040 SRG3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.39243 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02040 SRG3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.3291 x 10-2 14 20 41.18% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02040 SRG3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 2 1 5 33.33% 83.33% 3 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '19.3928'
Avg. expression score in LCM sample: '20.2831'
Tissue used: 'full endosperm'
AT3G02030 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.38433 x 10-1 5 3 0 9 62.50% 100.00% 8 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.050411'
Avg. expression score for this sample: '37.9466'
Avg. expression score in LCM sample: '86.8353'
Tissue used: 'full endosperm'
AT3G02030 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.393 x 10-3 15 13 53.57% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02030 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.77065 x 10-1 12 6 66.67% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02030 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.22393 x 10-1 4 3 3 6 57.14% 66.67% 7 9 TAIR8 Avg. embryo expression (dissected): '54.5177'
Avg. embryo expression (LCM): '36.6334'
AT3G02030 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02030 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.10619 x 10-1 10 2 4 22 83.33% 84.62% 12 26 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.050411'
Avg. expression score for this sample: '86.7529'
Avg. expression score in LCM sample: '86.8353'
Tissue used: 'pure endosperm, no chalazal'
AT3G02020 AK3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.589442'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G02020 AK3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02020 AK3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02020 AK3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02020 AK3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.48066'
Avg. embryo expression (LCM): '0'
AT3G02020 AK3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.39901'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G02010 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.76471 x 10-1 3 0 1 5 100.00% 83.33% 3 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '4.44636'
Avg. expression score in LCM sample: '2.96898'
Tissue used: 'full endosperm'
AT3G02010 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 11 13 2 2 45.83% 50.00% 24 4 TAIR8 Avg. embryo expression (dissected): '14.2814'
Avg. embryo expression (LCM): '10.1348'
AT3G02010 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.4428 x 10-2 17 0 100.00% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02010 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 6 1 9 14.29% 90.00% 7 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '7.19889'
Avg. expression score in LCM sample: '2.96898'
Tissue used: 'pure endosperm, no chalazal'
AT3G02010 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02010 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02000 ROXY1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02000 ROXY1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02000 ROXY1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '7.15535'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G02000 ROXY1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '116.079'
Avg. embryo expression (LCM): '85.7374'
AT3G02000 ROXY1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02000 ROXY1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '4.47332'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G01990 ACR6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.639199'
Avg. expression score in LCM sample: '2.73381'
Tissue used: 'pure endosperm, no chalazal'
AT3G01990 ACR6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.30487'
Avg. expression score in LCM sample: '2.73381'
Tissue used: 'full endosperm'