Displaying data sets 97301 - 97400 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G02580 STE1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.3 x 10-7 91 9 91.00% 100 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02580 STE1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.38089 x 10-1 10 5 20 19 66.67% 48.72% 15 39 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.762925'
Avg. expression score for this sample: '141.901'
Avg. expression score in LCM sample: '98.1527'
Tissue used: 'pure endosperm, no chalazal'
AT3G02570 MEE31 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.47767 x 10-1 172 44 79.63% 216 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02570 MEE31 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.8502 x 10-2 61 21 16 57 74.39% 78.08% 82 73 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001533'
Avg. expression score for this sample: '61.7059'
Avg. expression score in LCM sample: '114.467'
Tissue used: 'pure endosperm, no chalazal'
AT3G02570 MEE31 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.008 x 10-3 55 17 17 81 76.39% 82.65% 72 98 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001533'
Avg. expression score for this sample: '62.4605'
Avg. expression score in LCM sample: '114.467'
Tissue used: 'full endosperm'
AT3G02570 MEE31 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.27053 x 10-1 295 81 78.46% 376 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02570 MEE31 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.45576 x 10-1 56 46 17 18 54.90% 51.43% 102 35 TAIR8 Avg. embryo expression (dissected): '102.704'
Avg. embryo expression (LCM): '99.4514'
AT3G02570 MEE31 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.37694 x 10-1 51 12 80.95% 63 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02560 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02560 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02560 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '127.146'
Avg. expression score in LCM sample: '47.0921'
Tissue used: 'full endosperm'
AT3G02560 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '245.305'
Avg. embryo expression (LCM): '441.283'
AT3G02560 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02560 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '77.7968'
Avg. expression score in LCM sample: '47.0921'
Tissue used: 'pure endosperm, no chalazal'
AT3G02555 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.63386 x 10-1 34 13 18 36 72.34% 66.67% 47 54 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.14929'
Avg. expression score for this sample: '134.272'
Avg. expression score in LCM sample: '68.5364'
Tissue used: 'pure endosperm, no chalazal'
AT3G02555 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.31499 x 10-1 19 16 15 17 54.29% 53.12% 35 32 TAIR8 Avg. embryo expression (dissected): '107.645'
Avg. embryo expression (LCM): '101.511'
AT3G02555 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.06 x 10-4 33 0 100.00% 33 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02555 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.3131 x 10-1 7 3 70.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02555 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.2779 x 10-2 48 14 15 46 77.42% 75.41% 62 61 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.14929'
Avg. expression score for this sample: '114.539'
Avg. expression score in LCM sample: '68.5364'
Tissue used: 'full endosperm'
AT3G02555 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.882 x 10-3 67 8 89.33% 75 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02550 LBD41 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.5 x 10-9 215 7 96.85% 222 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02550 LBD41 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.69495 x 10-1 45 14 19 47 76.27% 71.21% 59 66 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.2e-06'
Avg. expression score for this sample: '244.548'
Avg. expression score in LCM sample: '276.923'
Tissue used: 'pure endosperm, no chalazal'
AT3G02550 LBD41 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.3 x 10-6 119 29 16 118 80.41% 88.06% 148 134 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.2e-06'
Avg. expression score for this sample: '323.033'
Avg. expression score in LCM sample: '276.923'
Tissue used: 'full endosperm'
AT3G02550 LBD41 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.07727 x 10-1 124 27 82.12% 151 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02550 LBD41 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.22208 x 10-1 13 7 7 6 65.00% 46.15% 20 13 TAIR8 Avg. embryo expression (dissected): '56.4253'
Avg. embryo expression (LCM): '183.832'
AT3G02550 LBD41 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.859 x 10-3 37 1 97.37% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02540 RAD23C endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.3431 x 10-2 40 10 80.00% 50 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02540 RAD23C endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.1 x 10-6 85 12 87.63% 97 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02540 RAD23C endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.18972 x 10-1 71 42 25 89 62.83% 78.07% 113 114 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '238.674'
Avg. expression score in LCM sample: '189.897'
Tissue used: 'full endosperm'
AT3G02540 RAD23C embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.06531 x 10-1 237 209 99 118 53.14% 54.38% 446 217 TAIR8 Avg. embryo expression (dissected): '354.581'
Avg. embryo expression (LCM): '164.442'
AT3G02540 RAD23C endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.1 x 10-11 92 4 95.83% 96 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02540 RAD23C endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.66654 x 10-1 279 185 127 323 60.13% 71.78% 464 450 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '318.859'
Avg. expression score in LCM sample: '189.897'
Tissue used: 'pure endosperm, no chalazal'
AT3G02530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '151.36'
Avg. expression score in LCM sample: '189.192'
Tissue used: 'pure endosperm, no chalazal'
AT3G02530 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '362.076'
Avg. embryo expression (LCM): '502.343'
AT3G02530 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02530 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '182.96'
Avg. expression score in LCM sample: '189.192'
Tissue used: 'full endosperm'
AT3G02530 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02520 GRF7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.58958 x 10-1 142 38 78.89% 180 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02520 GRF7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.14687 x 10-1 16 4 8 15 80.00% 65.22% 20 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.0498'
Avg. expression score for this sample: '195.965'
Avg. expression score in LCM sample: '158.826'
Tissue used: 'pure endosperm, no chalazal'
AT3G02520 GRF7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.1982 x 10-2 63 16 35 95 79.75% 73.08% 79 130 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.0498'
Avg. expression score for this sample: '213.597'
Avg. expression score in LCM sample: '158.826'
Tissue used: 'full endosperm'
AT3G02520 GRF7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.154 x 10-2 147 71 67.43% 218 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02520 GRF7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 13 13 3 4 50.00% 57.14% 26 7 TAIR8 Avg. embryo expression (dissected): '173.324'
Avg. embryo expression (LCM): '358.522'
AT3G02520 GRF7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0451 x 10-2 8 10 44.44% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02510 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.54612 x 10-1 8 4 66.67% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02510 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.14936 x 10-1 28 8 77.78% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.47363 x 10-1 38 15 7 35 71.70% 83.33% 53 42 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.616045'
Avg. expression score for this sample: '41.6232'
Avg. expression score in LCM sample: '14.1541'
Tissue used: 'full endosperm'
AT3G02510 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.53329 x 10-1 47 55 28 19 46.08% 40.43% 102 47 TAIR8 Avg. embryo expression (dissected): '118.425'
Avg. embryo expression (LCM): '54.0019'
AT3G02510 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1 x 10-5 70 4 94.59% 74 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.18027 x 10-1 10 18 4 20 35.71% 83.33% 28 24 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.616045'
Avg. expression score for this sample: '28.8363'
Avg. expression score in LCM sample: '14.1541'
Tissue used: 'pure endosperm, no chalazal'
AT3G02500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.80088'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G02500 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.74463'
Avg. embryo expression (LCM): '2.6373'
AT3G02500 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02500 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.68146'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G02500 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02493 RTFL19 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02493 RTFL19 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G02493 RTFL19 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G02493 RTFL19 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02493 RTFL19 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G02493 RTFL19 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02490 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 14 5 73.68% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02490 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.106 x 10-3 253 52 82.95% 305 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.8476 x 10-2 83 31 34 103 72.81% 75.18% 114 137 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.085447'
Avg. expression score for this sample: '121.016'
Avg. expression score in LCM sample: '58.7917'
Tissue used: 'full endosperm'
AT3G02490 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.94619 x 10-1 25 17 6 4 59.52% 40.00% 42 10 TAIR8 Avg. embryo expression (dissected): '77.8914'
Avg. embryo expression (LCM): '158.552'
AT3G02490 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.45125 x 10-1 180 75 70.59% 255 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.12726 x 10-1 13 5 7 16 72.22% 69.57% 18 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.085447'
Avg. expression score for this sample: '49.0443'
Avg. expression score in LCM sample: '58.7917'
Tissue used: 'pure endosperm, no chalazal'
AT3G02480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '6.39748'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G02480 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '4.55662'
Avg. embryo expression (LCM): '0'
AT3G02480 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02480 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '180.911'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G02480 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02470 SAMDC endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 3594 115 96.90% 3709 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02470 SAMDC endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.2 x 10-9 1966 672 639 1454 74.53% 69.47% 2638 2093 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '5909.15'
Avg. expression score in LCM sample: '2348.95'
Tissue used: 'pure endosperm, no chalazal'
AT3G02470 SAMDC endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 1508 286 300 1591 84.06% 84.14% 1794 1891 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '7029.48'
Avg. expression score in LCM sample: '2348.95'
Tissue used: 'full endosperm'
AT3G02470 SAMDC endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 1745 142 92.47% 1887 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02470 SAMDC embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.4314 x 10-2 660 570 164 183 53.66% 52.74% 1230 347 TAIR8 Avg. embryo expression (dissected): '3175.58'
Avg. embryo expression (LCM): '2211.24'
AT3G02470 SAMDC endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.6 x 10-18 1006 137 88.01% 1143 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02468 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02468 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02468 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '8075.79'
Avg. expression score in LCM sample: '1542.84'
Tissue used: 'full endosperm'
AT3G02468 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1393.49'
Avg. embryo expression (LCM): '1509.69'
AT3G02468 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02468 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1799.5'
Avg. expression score in LCM sample: '1542.84'
Tissue used: 'pure endosperm, no chalazal'
AT3G02460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '20.9529'
Avg. expression score in LCM sample: '15.5798'
Tissue used: 'pure endosperm, no chalazal'
AT3G02460 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '16.7939'
Avg. embryo expression (LCM): '17.3057'
AT3G02460 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02460 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 0 0 1 100.00% 100.00% 3 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '44.766'
Avg. expression score in LCM sample: '15.5798'
Tissue used: 'full endosperm'
AT3G02460 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02450 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '110.151'
Avg. expression score in LCM sample: '42.1095'
Tissue used: 'pure endosperm, no chalazal'
AT3G02450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '113.947'
Avg. expression score in LCM sample: '42.1095'
Tissue used: 'full endosperm'
AT3G02450 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02450 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '268.682'
Avg. embryo expression (LCM): '231.605'
AT3G02450 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02440 TBL20 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02440 TBL20 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'