Displaying data sets 97001 - 97100 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G03050 CSLD3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.89 x 10-4 409 184 194 609 68.97% 75.84% 593 803 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003682'
Avg. expression score for this sample: '326.819'
Avg. expression score in LCM sample: '102.136'
Tissue used: 'full endosperm'
AT3G03050 CSLD3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 186 82 134 246 69.40% 64.74% 268 380 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003682'
Avg. expression score for this sample: '290.335'
Avg. expression score in LCM sample: '102.136'
Tissue used: 'pure endosperm, no chalazal'
AT3G03040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.07449 x 10-1 18 5 18 9 78.26% 33.33% 23 27 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.771694'
Avg. expression score for this sample: '90.8932'
Avg. expression score in LCM sample: '24.913'
Tissue used: 'pure endosperm, no chalazal'
AT3G03040 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.58304 x 10-1 28 14 66.67% 42 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.70886 x 10-1 86 9 45 54 90.53% 54.55% 95 99 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.771694'
Avg. expression score for this sample: '140.837'
Avg. expression score in LCM sample: '24.913'
Tissue used: 'full endosperm'
AT3G03040 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.46895 x 10-1 29 8 8 3 78.38% 27.27% 37 11 TAIR8 Avg. embryo expression (dissected): '110.234'
Avg. embryo expression (LCM): '99.3383'
AT3G03040 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.6 x 10-12 144 6 96.00% 150 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03040 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.46075 x 10-1 25 10 71.43% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03030 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03030 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.89847 x 10-1 6 1 1 7 85.71% 87.50% 7 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '34.3469'
Avg. expression score in LCM sample: '21.5765'
Tissue used: 'full endosperm'
AT3G03030 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.37744 x 10-1 3 2 6 2 60.00% 25.00% 5 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '22.3208'
Avg. expression score in LCM sample: '21.5765'
Tissue used: 'pure endosperm, no chalazal'
AT3G03030 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03030 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.82675 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03030 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 6 7 0 1 46.15% 100.00% 13 1 TAIR8 Avg. embryo expression (dissected): '56.3277'
Avg. embryo expression (LCM): '47.7979'
AT3G03020 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '14.3903'
Avg. embryo expression (LCM): '8.08772'
AT3G03020 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 2 33.33% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03020 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03020 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 1 1 1 50.00% 50.00% 2 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '62.1919'
Avg. expression score in LCM sample: '11.3468'
Tissue used: 'full endosperm'
AT3G03020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '28.3242'
Avg. expression score in LCM sample: '11.3468'
Tissue used: 'pure endosperm, no chalazal'
AT3G03010 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '21.349'
Avg. expression score in LCM sample: '21.8411'
Tissue used: 'pure endosperm, no chalazal'
AT3G03010 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03010 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '25.3025'
Avg. expression score in LCM sample: '21.8411'
Tissue used: 'full endosperm'
AT3G03010 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03010 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '50.7348'
Avg. embryo expression (LCM): '97.3164'
AT3G03010 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03000 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.40893'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G03000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.52389'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G03000 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03000 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '1.48191'
AT3G03000 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02990 HSFA1E endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 12 5 70.59% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02990 HSFA1E embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 0 1 0 100.00% 0.00% 1 1 TAIR8 Avg. embryo expression (dissected): '34.1092'
Avg. embryo expression (LCM): '30.3666'
AT3G02990 HSFA1E endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02990 HSFA1E endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.95904 x 10-1 20 5 80.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02990 HSFA1E endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 1 1 2 66.67% 66.67% 3 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '19.609'
Avg. expression score in LCM sample: '3.95374'
Tissue used: 'full endosperm'
AT3G02990 HSFA1E endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '14.7259'
Avg. expression score in LCM sample: '3.95374'
Tissue used: 'pure endosperm, no chalazal'
AT3G02980 MCC1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 1 0 100.00% 0.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '37.739'
Avg. expression score in LCM sample: '25.8536'
Tissue used: 'pure endosperm, no chalazal'
AT3G02980 MCC1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02980 MCC1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 1 0 1 66.67% 100.00% 3 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '40.129'
Avg. expression score in LCM sample: '25.8536'
Tissue used: 'full endosperm'
AT3G02980 MCC1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 1 1 0 0.00% 0.00% 1 1 TAIR8 Avg. embryo expression (dissected): '19.0084'
Avg. embryo expression (LCM): '27.1893'
AT3G02980 MCC1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02980 MCC1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02970 EXL6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02970 EXL6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '8.62592'
Avg. expression score in LCM sample: '1.26402'
Tissue used: 'full endosperm'
AT3G02970 EXL6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '10.343'
Avg. expression score in LCM sample: '1.26402'
Tissue used: 'pure endosperm, no chalazal'
AT3G02970 EXL6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02970 EXL6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02970 EXL6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 4.28571 x 10-1 3 0 0 0 100.00% 3 0 TAIR8 Avg. embryo expression (dissected): '5.86793'
Avg. embryo expression (LCM): '0'
AT3G02960 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G02960 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02960 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G02960 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02960 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02960 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.491654'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G02950 THO7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 0 2 100.00% 100.00% 2 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.230769'
Avg. expression score for this sample: '203.554'
Avg. expression score in LCM sample: '75.3121'
Tissue used: 'full endosperm'
AT3G02950 THO7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.21053 x 10-1 10 3 76.92% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02950 THO7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 1 100.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.230769'
Avg. expression score for this sample: '159.843'
Avg. expression score in LCM sample: '75.3121'
Tissue used: 'pure endosperm, no chalazal'
AT3G02950 THO7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '199.021'
Avg. embryo expression (LCM): '161.981'
AT3G02950 THO7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 10 0 100.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02950 THO7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02940 MYB107 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02940 MYB107 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02940 MYB107 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '156.087'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G02940 MYB107 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02940 MYB107 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '4.41185'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G02940 MYB107 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G02930 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 3 0 2 50.00% 100.00% 6 2 TAIR8 Avg. embryo expression (dissected): '25.2452'
Avg. embryo expression (LCM): '26.486'
AT3G02930 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 73 0 100.00% 73 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02930 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.44444 x 10-1 3 0 0 2 100.00% 100.00% 3 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.1e-09'
Avg. expression score for this sample: '13.0236'
Avg. expression score in LCM sample: '2.42516'
Tissue used: 'pure endosperm, no chalazal'
AT3G02930 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02930 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.3 x 10-9 18 0 0 59 100.00% 100.00% 18 59 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.1e-09'
Avg. expression score for this sample: '82.7361'
Avg. expression score in LCM sample: '2.42516'
Tissue used: 'full endosperm'
AT3G02930 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.59375 x 10-1 45 1 97.83% 46 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02920 RPA32B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.4833 x 10-1 36 20 64.29% 56 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02920 RPA32B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.98482 x 10-1 6 3 7 20 66.67% 74.07% 9 27 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.4929'
Avg. expression score for this sample: '33.2085'
Avg. expression score in LCM sample: '22.8259'
Tissue used: 'full endosperm'
AT3G02920 RPA32B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.44334 x 10-1 18 3 9 14 85.71% 60.87% 21 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.4929'
Avg. expression score for this sample: '42.4022'
Avg. expression score in LCM sample: '22.8259'
Tissue used: 'pure endosperm, no chalazal'
AT3G02920 RPA32B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.55751 x 10-1 28 12 5 5 70.00% 50.00% 40 10 TAIR8 Avg. embryo expression (dissected): '101.047'
Avg. embryo expression (LCM): '76.9338'
AT3G02920 RPA32B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.52076 x 10-1 57 15 79.17% 72 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02920 RPA32B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02910 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02910 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.14234 x 10-1 19 5 3 15 79.17% 83.33% 24 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.192461'
Avg. expression score for this sample: '291.426'
Avg. expression score in LCM sample: '74.3568'
Tissue used: 'full endosperm'
AT3G02910 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.344 x 10-3 26 0 100.00% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02910 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.9136 x 10-2 47 5 90.38% 52 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02910 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.78716 x 10-1 10 4 4 12 71.43% 75.00% 14 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.192461'
Avg. expression score for this sample: '268.093'
Avg. expression score in LCM sample: '74.3568'
Tissue used: 'pure endosperm, no chalazal'
AT3G02910 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 7 6 3 2 53.85% 40.00% 13 5 TAIR8 Avg. embryo expression (dissected): '188.05'
Avg. embryo expression (LCM): '62.391'
AT3G02900 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.3489 x 10-1 27 13 6 5 67.50% 45.45% 40 11 TAIR8 Avg. embryo expression (dissected): '142.71'
Avg. embryo expression (LCM): '76.0045'
AT3G02900 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.1 x 10-10 116 10 92.06% 126 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02900 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.40482 x 10-1 22 5 15 12 81.48% 44.44% 27 27 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.380006'
Avg. expression score for this sample: '92.8261'
Avg. expression score in LCM sample: '32.3501'
Tissue used: 'pure endosperm, no chalazal'
AT3G02900 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.69149 x 10-1 7 6 53.85% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02900 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.76117 x 10-1 45 32 58.44% 77 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02900 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.32449 x 10-1 53 20 29 25 72.60% 46.30% 73 54 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.380006'
Avg. expression score for this sample: '87.1275'
Avg. expression score in LCM sample: '32.3501'
Tissue used: 'full endosperm'
AT3G02890 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.27808 x 10-1 85 39 54 94 68.55% 63.51% 124 148 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.867499'
Avg. expression score for this sample: '166.286'
Avg. expression score in LCM sample: '13.7719'
Tissue used: 'full endosperm'
AT3G02890 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.9 x 10-7 72 6 92.31% 78 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02890 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 17 3 14 15 85.00% 51.72% 20 29 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.867499'
Avg. expression score for this sample: '96.9015'
Avg. expression score in LCM sample: '13.7719'
Tissue used: 'pure endosperm, no chalazal'
AT3G02890 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.87405 x 10-1 36 39 19 16 48.00% 45.71% 75 35 TAIR8 Avg. embryo expression (dissected): '225.066'
Avg. embryo expression (LCM): '104.186'
AT3G02890 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.517 x 10-3 19 1 95.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02890 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.0 x 10-11 119 8 93.70% 127 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02885 GASA5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G02885 GASA5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'