Displaying data sets 96901 - 97000 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G03210 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 19 3 86.36% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.053 x 10-3 38 4 8 33 90.48% 80.49% 42 41 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00077'
Avg. expression score for this sample: '253.863'
Avg. expression score in LCM sample: '102.195'
Tissue used: 'full endosperm'
AT3G03210 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 5 7 3 5 41.67% 62.50% 12 8 TAIR8 Avg. embryo expression (dissected): '156.232'
Avg. embryo expression (LCM): '87.3198'
AT3G03210 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.1 x 10-5 169 3 98.26% 172 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.51661 x 10-1 18 1 4 11 94.74% 73.33% 19 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00077'
Avg. expression score for this sample: '204.003'
Avg. expression score in LCM sample: '102.195'
Tissue used: 'pure endosperm, no chalazal'
AT3G03210 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.00061 x 10-1 92 23 80.00% 115 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03200 NAC045 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03200 NAC045 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G03200 NAC045 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03200 NAC045 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03200 NAC045 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G03200 NAC045 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G03190 GSTF11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G03190 GSTF11 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03190 GSTF11 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.365184'
Avg. embryo expression (LCM): '0'
AT3G03190 GSTF11 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03190 GSTF11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G03190 GSTF11 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03180 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '111.196'
Avg. expression score in LCM sample: '42.4623'
Tissue used: 'pure endosperm, no chalazal'
AT3G03180 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '129.308'
Avg. expression score in LCM sample: '42.4623'
Tissue used: 'full endosperm'
AT3G03180 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '78.4573'
Avg. embryo expression (LCM): '28.2191'
AT3G03180 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03170 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03170 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03170 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '14.1535'
Avg. embryo expression (LCM): '11.1269'
AT3G03170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '6.83769'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G03170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.93114'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G03170 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03160 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '182.386'
Avg. expression score in LCM sample: '180.828'
Tissue used: 'pure endosperm, no chalazal'
AT3G03160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '158.012'
Avg. expression score in LCM sample: '180.828'
Tissue used: 'full endosperm'
AT3G03160 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03160 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '196.436'
Avg. embryo expression (LCM): '219.197'
AT3G03160 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03150 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.69 x 10-4 94 3 96.91% 97 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.1 x 10-6 79 20 12 107 79.80% 89.92% 99 119 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.5e-07'
Avg. expression score for this sample: '159.447'
Avg. expression score in LCM sample: '17.0349'
Tissue used: 'full endosperm'
AT3G03150 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 18 23 2 6 43.90% 75.00% 41 8 TAIR8 Avg. embryo expression (dissected): '96.5917'
Avg. embryo expression (LCM): '21.8394'
AT3G03150 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.88 x 10-4 99 3 97.06% 102 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.1673 x 10-2 44 11 10 47 80.00% 82.46% 55 57 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.5e-07'
Avg. expression score for this sample: '166.885'
Avg. expression score in LCM sample: '17.0349'
Tissue used: 'pure endosperm, no chalazal'
AT3G03150 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.5391 x 10-2 85 6 93.41% 91 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03140 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.41457 x 10-1 10 1 90.91% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03140 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 5 0 3 5 100.00% 62.50% 5 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '296.963'
Avg. expression score in LCM sample: '128.754'
Tissue used: 'pure endosperm, no chalazal'
AT3G03140 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.5259 x 10-2 15 1 93.75% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03140 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03140 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 2 0 0 33.33% 3 0 TAIR8 Avg. embryo expression (dissected): '366.741'
Avg. embryo expression (LCM): '175.067'
AT3G03140 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.87081 x 10-1 9 9 3 8 50.00% 72.73% 18 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '196.237'
Avg. expression score in LCM sample: '128.754'
Tissue used: 'full endosperm'
AT3G03130 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 3 0 0 0 100.00% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '108.671'
Avg. expression score in LCM sample: '174.993'
Tissue used: 'full endosperm'
AT3G03130 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03130 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 1 0 0 66.67% 3 0 TAIR8 Avg. embryo expression (dissected): '601.491'
Avg. embryo expression (LCM): '600.903'
AT3G03130 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03130 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '291.08'
Avg. expression score in LCM sample: '174.993'
Tissue used: 'pure endosperm, no chalazal'
AT3G03130 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.4 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03120 ARFB1C endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.6 x 10-6 131 9 93.57% 140 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03120 ARFB1C endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.49027 x 10-1 14 16 6 25 46.67% 80.65% 30 31 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.162449'
Avg. expression score for this sample: '182.774'
Avg. expression score in LCM sample: '80.6769'
Tissue used: 'pure endosperm, no chalazal'
AT3G03120 ARFB1C endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.0105 x 10-2 26 2 92.86% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03120 ARFB1C endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.8299 x 10-2 30 12 12 62 71.43% 83.78% 42 74 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.162449'
Avg. expression score for this sample: '299.745'
Avg. expression score in LCM sample: '80.6769'
Tissue used: 'full endosperm'
AT3G03120 ARFB1C embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.21257 x 10-1 14 8 4 7 63.64% 63.64% 22 11 TAIR8 Avg. embryo expression (dissected): '184.842'
Avg. embryo expression (LCM): '86.1644'
AT3G03120 ARFB1C endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.72 x 10-4 122 15 89.05% 137 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03110 XPO1B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.0127 x 10-2 109 14 88.62% 123 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03110 XPO1B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03110 XPO1B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.6284 x 10-2 28 50 6 5 35.90% 45.45% 78 11 TAIR8 Avg. embryo expression (dissected): '43.2621'
Avg. embryo expression (LCM): '44.495'
AT3G03110 XPO1B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.468 x 10-3 28 5 11 66 84.85% 85.71% 33 77 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.009486'
Avg. expression score for this sample: '23.4879'
Avg. expression score in LCM sample: '21.3414'
Tissue used: 'full endosperm'
AT3G03110 XPO1B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 35 9 13 13 79.55% 50.00% 44 26 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.009486'
Avg. expression score for this sample: '20.7778'
Avg. expression score in LCM sample: '21.3414'
Tissue used: 'pure endosperm, no chalazal'
AT3G03110 XPO1B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.607 x 10-3 291 141 67.36% 432 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03100 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03100 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '679.854'
Avg. expression score in LCM sample: '436.308'
Tissue used: 'pure endosperm, no chalazal'
AT3G03100 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '608.214'
Avg. expression score in LCM sample: '436.308'
Tissue used: 'full endosperm'
AT3G03100 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03100 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '931.915'
Avg. embryo expression (LCM): '965.516'
AT3G03100 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03090 VGT1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.65423 x 10-1 16 16 50.00% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03090 VGT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.1546 x 10-2 67 57 56 85 54.03% 60.28% 124 141 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.074759'
Avg. expression score for this sample: '29.4839'
Avg. expression score in LCM sample: '13.3604'
Tissue used: 'full endosperm'
AT3G03090 VGT1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.08665 x 10-1 51 64 25 25 44.35% 50.00% 115 50 TAIR8 Avg. embryo expression (dissected): '44.7218'
Avg. embryo expression (LCM): '27.8926'
AT3G03090 VGT1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.8 x 10-7 107 20 84.25% 127 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03090 VGT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.05929 x 10-1 43 28 27 62 60.56% 69.66% 71 89 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.074759'
Avg. expression score for this sample: '24.4277'
Avg. expression score in LCM sample: '13.3604'
Tissue used: 'pure endosperm, no chalazal'
AT3G03090 VGT1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.86 x 10-4 193 69 73.66% 262 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03080 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.243235'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G03080 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03080 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03080 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '1.16795'
AT3G03080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.00072'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G03070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.125 x 10-3 342 107 118 285 76.17% 70.72% 449 403 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001191'
Avg. expression score for this sample: '246.965'
Avg. expression score in LCM sample: '84.7629'
Tissue used: 'full endosperm'
AT3G03070 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.4 x 10-10 417 66 86.34% 483 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03070 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.14148 x 10-1 114 81 31 35 58.46% 53.03% 195 66 TAIR8 Avg. embryo expression (dissected): '201.267'
Avg. embryo expression (LCM): '162.508'
AT3G03070 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.00401 x 10-1 59 24 71.08% 83 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.11923 x 10-1 167 56 86 174 74.89% 66.92% 223 260 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001191'
Avg. expression score for this sample: '238.432'
Avg. expression score in LCM sample: '84.7629'
Tissue used: 'pure endosperm, no chalazal'
AT3G03070 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.81205 x 10-1 307 137 69.14% 444 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03060 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.9073 x 10-2 419 232 64.36% 651 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.36763 x 10-1 145 39 77 107 78.80% 58.15% 184 184 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.179032'
Avg. expression score for this sample: '62.5119'
Avg. expression score in LCM sample: '23.6783'
Tissue used: 'pure endosperm, no chalazal'
AT3G03060 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.04036 x 10-1 22 15 59.46% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.77627 x 10-1 238 63 103 159 79.07% 60.69% 301 262 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.179032'
Avg. expression score for this sample: '78.5922'
Avg. expression score in LCM sample: '23.6783'
Tissue used: 'full endosperm'
AT3G03060 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.34782 x 10-1 294 240 90 73 55.06% 44.79% 534 163 TAIR8 Avg. embryo expression (dissected): '192.731'
Avg. embryo expression (LCM): '286.009'
AT3G03060 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.82 x 10-4 516 149 77.59% 665 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03050 CSLD3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.8 x 10-14 403 58 87.42% 461 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03050 CSLD3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.05421 x 10-1 93 30 75.61% 123 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03050 CSLD3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.00969 x 10-1 90 76 28 23 54.22% 45.10% 166 51 TAIR8 Avg. embryo expression (dissected): '163.187'
Avg. embryo expression (LCM): '82.7861'
AT3G03050 CSLD3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.89 x 10-4 409 184 194 609 68.97% 75.84% 593 803 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003682'
Avg. expression score for this sample: '326.819'
Avg. expression score in LCM sample: '102.136'
Tissue used: 'full endosperm'