| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G181266 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.13 x 10-22 | 228 | 9 | 147 | 10 | 96.20% | 6.37% | 237 | 157 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.13e-22' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G181266 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.56 x 10-6 | 65 | 23 | 77 | 7 | 73.86% | 8.33% | 88 | 84 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.56e-06' χ2 p-value for Mo17 x B73: '2.21e-14' Biased in favor of strain: 'B73' |
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| GRMZM2G181259 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G181259 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G181258 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 5 | 0 | 0.00% | 0.00% | 2 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0454988' χ2 p-value for Mo17 x B73: '.0015654' Biased in favor of strain: '' |
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| GRMZM2G181258 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 12 | 0 | 8 | 1 | 100.00% | 11.11% | 12 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000532' χ2 p-value for Mo17 x B73: '.0196307' Biased in favor of strain: '' |
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| GRMZM2G181251 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.432349 x 10-1 | 50 | 36 | 60 | 45 | 58.14% | 42.86% | 86 | 105 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1311305' χ2 p-value for Mo17 x B73: '.1432349' Biased in favor of strain: '' |
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| GRMZM2G181251 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 3 | 17 | 2 | 0.00% | 10.53% | 3 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0143052' χ2 p-value for Mo17 x B73: '2.09e-07' Biased in favor of strain: '' |
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| GRMZM2G181236 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 19 | 46 | 100.00% | 70.77% | 1 | 65 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.4828999' Biased in favor of strain: '' |
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| GRMZM2G181236 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.802796 x 10-1 | 22 | 14 | 25 | 28 | 61.11% | 52.83% | 36 | 53 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1824224' χ2 p-value for Mo17 x B73: '.6802796' Biased in favor of strain: '' |
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| GRMZM2G181231 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.419397 x 10-1 | 73 | 64 | 70 | 52 | 53.28% | 42.62% | 137 | 122 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4419397' χ2 p-value for Mo17 x B73: '.1031769' Biased in favor of strain: '' |
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| GRMZM2G181231 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.573131 x 10-1 | 88 | 33 | 99 | 104 | 72.73% | 51.23% | 121 | 203 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1573131' χ2 p-value for Mo17 x B73: '3.08e-06' Biased in favor of strain: '' |
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| GRMZM2G181219 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.392279 x 10-1 | 1027 | 473 | 595 | 775 | 68.47% | 56.57% | 1500 | 1370 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1392279' χ2 p-value for Mo17 x B73: '2.22e-15' Biased in favor of strain: '' |
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| GRMZM2G181219 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.132121 x 10-1 | 597 | 653 | 520 | 742 | 47.76% | 58.80% | 1250 | 1262 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1132121' χ2 p-value for Mo17 x B73: '4.13e-10' Biased in favor of strain: '' |
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| GRMZM2G181206 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.9579 x 10-3 | 42 | 72 | 8 | 50 | 36.84% | 86.21% | 114 | 58 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0049579' χ2 p-value for Mo17 x B73: '3.49e-08' Biased in favor of strain: 'Mo17' |
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| GRMZM2G181206 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.7996 x 10-1 | 494 | 201 | 134 | 276 | 71.08% | 67.32% | 695 | 410 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0136054' χ2 p-value for Mo17 x B73: '.77996' Biased in favor of strain: '' |
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| GRMZM2G181194 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 1 | 3 | 1 | 75.00% | 25.00% | 4 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7236798' χ2 p-value for Mo17 x B73: '.0770998' Biased in favor of strain: '' |
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| GRMZM2G181194 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 1 | 5 | 3 | 83.33% | 37.50% | 6 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1024704' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G181158 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.080725 x 10-1 | 37 | 38 | 26 | 27 | 49.33% | 50.94% | 75 | 53 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9080725' χ2 p-value for Mo17 x B73: '.8907458' Biased in favor of strain: '' |
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| GRMZM2G181158 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.348271 x 10-1 | 18 | 1 | 16 | 30 | 94.74% | 65.22% | 19 | 46 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0094445' χ2 p-value for Mo17 x B73: '.8348271' Biased in favor of strain: '' |
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| GRMZM2G181153 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.9 x 10-7 | 1365 | 424 | 704 | 1113 | 76.30% | 61.25% | 1789 | 1817 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.48e-18' χ2 p-value for Mo17 x B73: '9.90e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G181153 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.48307 x 10-2 | 4269 | 2995 | 3382 | 3219 | 58.77% | 48.77% | 7264 | 6601 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '.0448307' Biased in favor of strain: 'B73' |
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| GRMZM2G181151 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.748 x 10-4 | 527 | 412 | 510 | 272 | 56.12% | 34.78% | 939 | 782 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001748' χ2 p-value for Mo17 x B73: '1.73e-17' Biased in favor of strain: 'B73' |
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| GRMZM2G181151 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.793036 x 10-1 | 179 | 96 | 115 | 172 | 65.09% | 59.93% | 275 | 287 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5793036' χ2 p-value for Mo17 x B73: '.0154832' Biased in favor of strain: '' |
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| GRMZM2G181148 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 3.23 x 10-9 | 82 | 97 | 43 | 11 | 45.81% | 20.37% | 179 | 54 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.23e-09' χ2 p-value for Mo17 x B73: '5.32e-13' Biased in favor of strain: '' |
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| GRMZM2G181148 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.7 x 10-6 | 196 | 112 | 189 | 69 | 63.64% | 26.74% | 308 | 258 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.70e-06' χ2 p-value for Mo17 x B73: '7.97e-14' Biased in favor of strain: 'B73' |
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| GRMZM2G181104 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.57518 x 10-1 | 68 | 53 | 34 | 44 | 56.20% | 56.41% | 121 | 78 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.172682' χ2 p-value for Mo17 x B73: '.257518' Biased in favor of strain: '' |
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| GRMZM2G181104 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.999996 x 10-1 | 19 | 10 | 23 | 46 | 65.52% | 66.67% | 29 | 69 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8955124' χ2 p-value for Mo17 x B73: '.9999996' Biased in favor of strain: '' |
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| GRMZM2G181081 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.650053 x 10-1 | 31 | 5 | 9 | 15 | 86.11% | 62.50% | 36 | 24 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0133291' χ2 p-value for Mo17 x B73: '.6650053' Biased in favor of strain: '' |
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| GRMZM2G181081 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.9 x 10-15 | 147 | 25 | 101 | 16 | 85.47% | 13.68% | 172 | 117 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.37e-20' χ2 p-value for Mo17 x B73: '3.90e-15' Biased in favor of strain: 'B73' |
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| GRMZM2G181030 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.47609 x 10-2 | 77 | 104 | 69 | 98 | 42.54% | 58.68% | 181 | 167 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0447609' χ2 p-value for Mo17 x B73: '.0248268' Biased in favor of strain: 'Mo17' |
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| GRMZM2G181030 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.38 x 10-8 | 502 | 152 | 227 | 194 | 76.76% | 46.08% | 654 | 421 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.38e-08' χ2 p-value for Mo17 x B73: '3.24e-19' Biased in favor of strain: 'B73' |
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| GRMZM2G181028 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G181028 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 0 | 7 | 0 | 100.00% | 0.00% | 6 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0143059' χ2 p-value for Mo17 x B73: '.008151' Biased in favor of strain: '' |
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| GRMZM2G181002 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.218734 x 10-1 | 71 | 77 | 66 | 80 | 47.97% | 54.79% | 148 | 146 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6218734' χ2 p-value for Mo17 x B73: '.2465996' Biased in favor of strain: '' |
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| GRMZM2G181002 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.316654 x 10-1 | 28 | 20 | 23 | 45 | 58.33% | 66.18% | 48 | 68 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206575' χ2 p-value for Mo17 x B73: '.9316654' Biased in favor of strain: '' |
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| GRMZM2G181000 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.7 x 10-5 | 37 | 0 | 35 | 4 | 100.00% | 10.26% | 37 | 39 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000017' χ2 p-value for Mo17 x B73: '7.84e-14' Biased in favor of strain: 'B73' |
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| GRMZM2G181000 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.816834 x 10-1 | 96 | 106 | 49 | 87 | 47.52% | 63.97% | 202 | 136 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4816834' χ2 p-value for Mo17 x B73: '.0011201' Biased in favor of strain: '' |
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| GRMZM2G180990 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.618044 x 10-1 | 30 | 13 | 17 | 16 | 69.77% | 48.48% | 43 | 33 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0095288' χ2 p-value for Mo17 x B73: '.8618044' Biased in favor of strain: '' |
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| GRMZM2G180990 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.955124 x 10-1 | 19 | 10 | 8 | 26 | 65.52% | 76.47% | 29 | 34 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8955124' χ2 p-value for Mo17 x B73: '.225253' Biased in favor of strain: '' |
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| GRMZM2G180983 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.75562 x 10-2 | 41 | 34 | 30 | 87 | 54.67% | 74.36% | 75 | 117 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0274829' χ2 p-value for Mo17 x B73: '.0775562' Biased in favor of strain: '' |
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| GRMZM2G180983 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.290345 x 10-1 | 39 | 36 | 29 | 34 | 52.00% | 53.97% | 75 | 63 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7290345' χ2 p-value for Mo17 x B73: '.5287333' Biased in favor of strain: '' |
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| GRMZM2G180979 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.83357 x 10-2 | 336 | 206 | 269 | 217 | 61.99% | 44.65% | 542 | 486 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.35e-08' χ2 p-value for Mo17 x B73: '.0183357' Biased in favor of strain: 'B73' |
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| GRMZM2G180979 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.332338 x 10-1 | 244 | 105 | 129 | 232 | 69.91% | 64.27% | 349 | 361 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1981519' χ2 p-value for Mo17 x B73: '.3332338' Biased in favor of strain: '' |
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| GRMZM2G180971 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.62973 x 10-1 | 130 | 68 | 77 | 110 | 65.66% | 58.82% | 198 | 187 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.762973' χ2 p-value for Mo17 x B73: '.0228947' Biased in favor of strain: '' |
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| GRMZM2G180971 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.22164 x 10-2 | 217 | 101 | 173 | 133 | 68.24% | 43.46% | 318 | 306 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.77e-11' χ2 p-value for Mo17 x B73: '.0222164' Biased in favor of strain: 'B73' |
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| GRMZM2G180967 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.039 | 47 | 20 | 30 | 16 | 70.15% | 34.78% | 67 | 46 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0009718' χ2 p-value for Mo17 x B73: '.039' Biased in favor of strain: 'B73' |
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| GRMZM2G180967 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.113921 x 10-1 | 65 | 22 | 36 | 37 | 74.71% | 50.68% | 87 | 73 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1113921' χ2 p-value for Mo17 x B73: '.003772' Biased in favor of strain: '' |
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| GRMZM2G180951 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 1 | 1 | 1 | 83.33% | 50.00% | 6 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.386481' χ2 p-value for Mo17 x B73: '.617075' Biased in favor of strain: '' |
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| GRMZM2G180951 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 3 | 0 | 100.00% | 0.00% | 2 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G180950 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.166645 x 10-1 | 17 | 9 | 14 | 29 | 65.38% | 67.44% | 26 | 43 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1166645' χ2 p-value for Mo17 x B73: '.0221679' Biased in favor of strain: '' |
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| GRMZM2G180950 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.56363 x 10-1 | 54 | 31 | 56 | 111 | 63.53% | 66.47% | 85 | 167 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.539468' χ2 p-value for Mo17 x B73: '.956363' Biased in favor of strain: '' |
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| GRMZM2G180947 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 0 | 0 | 100.00% | 4 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G180947 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 6 | 0 | 0 | 14.29% | 7 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0587817' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G180930 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.81 x 10-19 | 1139 | 575 | 818 | 493 | 66.45% | 37.60% | 1714 | 1311 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '2.81e-19' Biased in favor of strain: 'B73' |
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| GRMZM2G180930 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.171305 x 10-1 | 196 | 92 | 185 | 156 | 68.06% | 45.75% | 288 | 341 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6171305' χ2 p-value for Mo17 x B73: '2.52e-16' Biased in favor of strain: '' |
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| GRMZM2G180926 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 6 | 14 | 0.00% | 70.00% | 2 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0454988' χ2 p-value for Mo17 x B73: '.7518298' Biased in favor of strain: '' |
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| GRMZM2G180926 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 4 | 2 | 3 | 0.00% | 60.00% | 4 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: '' |
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| GRMZM2G180922 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.141 x 10-4 | 27 | 83 | 36 | 75 | 24.55% | 67.57% | 110 | 111 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.33e-08' χ2 p-value for Mo17 x B73: '.0002141' Biased in favor of strain: 'Mo17' |
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| GRMZM2G180922 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.505761 x 10-1 | 45 | 52 | 35 | 93 | 46.39% | 72.66% | 97 | 128 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000228' χ2 p-value for Mo17 x B73: '.1505761' Biased in favor of strain: '' |
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| GRMZM2G180920 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 4 | 10 | 23 | 55.56% | 69.70% | 9 | 33 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4794898' χ2 p-value for Mo17 x B73: '.7119234' Biased in favor of strain: '' |
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| GRMZM2G180920 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.024704 x 10-1 | 33 | 21 | 19 | 10 | 61.11% | 34.48% | 54 | 29 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1024704' χ2 p-value for Mo17 x B73: '.0946707' Biased in favor of strain: '' |
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| GRMZM2G180909 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 2256 | 740 | 1614 | 665 | 75.30% | 29.18% | 2996 | 2279 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G180909 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1613 | 239 | 746 | 405 | 87.10% | 35.19% | 1852 | 1151 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G180879 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | maternally biased | 2.1156 x 10-3 | 211 | 63 | 61 | 191 | 77.01% | 75.79% | 274 | 252 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002824' χ2 p-value for Mo17 x B73: '.0021156' Biased in favor of strain: '' |
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| GRMZM2G180879 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.226 x 10-4 | 148 | 214 | 117 | 177 | 40.88% | 60.20% | 362 | 294 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0005226' χ2 p-value for Mo17 x B73: '.0004665' Biased in favor of strain: 'Mo17' |
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| GRMZM2G180870 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 1 | 0 | 3 | 80.00% | 100.00% | 5 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1797125' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G180870 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G180863 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.03784 x 10-1 | 238 | 126 | 167 | 258 | 65.38% | 60.71% | 364 | 425 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.603784' χ2 p-value for Mo17 x B73: '.0091398' Biased in favor of strain: '' |
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| GRMZM2G180863 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 726 | 266 | 702 | 263 | 73.19% | 27.25% | 992 | 965 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G180847 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.58 x 10-9 | 416 | 264 | 480 | 313 | 61.18% | 39.47% | 680 | 793 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.58e-09' χ2 p-value for Mo17 x B73: '3.02e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G180847 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 3.11 x 10-5 | 216 | 314 | 375 | 569 | 40.75% | 60.28% | 530 | 944 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.05e-36' χ2 p-value for Mo17 x B73: '.0000311' Biased in favor of strain: '' |
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| GRMZM2G180815 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.14192 x 10-2 | 78 | 67 | 71 | 201 | 53.79% | 73.90% | 145 | 272 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0010072' χ2 p-value for Mo17 x B73: '.0114192' Biased in favor of strain: '' |
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| GRMZM2G180815 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.03 x 10-6 | 482 | 306 | 431 | 299 | 61.17% | 40.96% | 788 | 730 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.62e-10' χ2 p-value for Mo17 x B73: '1.03e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G180740 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.6162 x 10-3 | 2 | 15 | 0 | 21 | 11.76% | 100.00% | 17 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0016162' χ2 p-value for Mo17 x B73: '4.59e-06' Biased in favor of strain: 'Mo17' |
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| GRMZM2G180740 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.58217 x 10-2 | 1 | 27 | 4 | 27 | 3.57% | 87.10% | 28 | 31 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.42e-12' χ2 p-value for Mo17 x B73: '.0158217' Biased in favor of strain: '' |
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| GRMZM2G180732 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 2845 | 4442 | 1721 | 8491 | 39.04% | 83.15% | 7287 | 10212 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'Mo17' |
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| GRMZM2G180732 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.054046 x 10-1 | 2441 | 2066 | 1695 | 1734 | 54.16% | 50.57% | 4507 | 3429 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.33e-08' χ2 p-value for Mo17 x B73: '.5054046' Biased in favor of strain: '' |
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| GRMZM2G180716 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.3 x 10-9 | 583 | 354 | 514 | 337 | 62.22% | 39.60% | 937 | 851 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.37e-14' χ2 p-value for Mo17 x B73: '1.30e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G180716 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.870572 x 10-1 | 328 | 182 | 182 | 373 | 64.31% | 67.21% | 510 | 555 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2596096' χ2 p-value for Mo17 x B73: '.7870572' Biased in favor of strain: '' |
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| GRMZM2G180704 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 1 | 0 | 12 | 83.33% | 100.00% | 6 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.386481' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
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| GRMZM2G180704 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 3 | 3 | 1 | 40.00% | 25.00% | 5 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6547208' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G180699 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.35 x 10-5 | 100 | 26 | 72 | 31 | 79.37% | 30.10% | 126 | 103 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.33e-11' χ2 p-value for Mo17 x B73: '.0000535' Biased in favor of strain: 'B73' |
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| GRMZM2G180699 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.28 x 10-5 | 133 | 30 | 131 | 71 | 81.60% | 35.15% | 163 | 202 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000528' χ2 p-value for Mo17 x B73: '2.05e-21' Biased in favor of strain: 'B73' |
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| GRMZM2G180691 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G180691 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 3 | 7 | 6 | 57.14% | 46.15% | 7 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.705457' χ2 p-value for Mo17 x B73: '.7815113' Biased in favor of strain: '' |
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| GRMZM2G180659 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.95 x 10-5 | 110 | 37 | 81 | 35 | 74.83% | 30.17% | 147 | 116 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.73e-09' χ2 p-value for Mo17 x B73: '.0000195' Biased in favor of strain: 'B73' |
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| GRMZM2G180659 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 3 | 10 | 4 | 40.00% | 28.57% | 5 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2058979' χ2 p-value for Mo17 x B73: '.0024969' Biased in favor of strain: '' |
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| GRMZM2G180654 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.179353 x 10-1 | 231 | 105 | 184 | 220 | 68.75% | 54.46% | 336 | 404 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4179353' χ2 p-value for Mo17 x B73: '1.92e-07' Biased in favor of strain: '' |
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| GRMZM2G180654 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.9266 x 10-3 | 354 | 172 | 282 | 213 | 67.30% | 43.03% | 526 | 495 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.10e-15' χ2 p-value for Mo17 x B73: '.0019266' Biased in favor of strain: 'B73' |
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| GRMZM2G180639 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.21 x 10-10 | 174 | 77 | 170 | 63 | 69.32% | 27.04% | 251 | 233 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.21e-10' χ2 p-value for Mo17 x B73: '2.39e-12' Biased in favor of strain: 'B73' |
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| GRMZM2G180639 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.3921 x 10-3 | 57 | 10 | 35 | 13 | 85.07% | 27.08% | 67 | 48 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0013921' χ2 p-value for Mo17 x B73: '5.97e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G180625 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 8038 | 1612 | 4886 | 4276 | 83.30% | 46.67% | 9650 | 9162 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G180625 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 19629 | 4547 | 26755 | 8033 | 81.19% | 23.09% | 24176 | 34788 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G180622 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.6 x 10-6 | 296 | 167 | 272 | 171 | 63.93% | 38.60% | 463 | 443 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.03e-09' χ2 p-value for Mo17 x B73: '1.60e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G180622 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 9.01 x 10-23 | 71 | 159 | 285 | 249 | 30.87% | 46.63% | 230 | 534 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.09e-30' χ2 p-value for Mo17 x B73: '9.01e-23' Biased in favor of strain: '' |
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| GRMZM2G180620 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.15594 x 10-2 | 44 | 9 | 67 | 29 | 83.02% | 30.21% | 53 | 96 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0115594' χ2 p-value for Mo17 x B73: '3.52e-14' Biased in favor of strain: '' |
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| GRMZM2G180620 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.522416 x 10-1 | 79 | 62 | 116 | 72 | 56.03% | 38.30% | 141 | 188 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1522416' χ2 p-value for Mo17 x B73: '.0013318' Biased in favor of strain: '' |
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| GRMZM2G180612 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.31 x 10-10 | 216 | 100 | 154 | 60 | 68.35% | 28.04% | 316 | 214 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.78e-11' χ2 p-value for Mo17 x B73: '1.31e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G180612 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1043 | 70 | 396 | 140 | 93.71% | 26.12% | 1113 | 536 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |