Displaying data sets 96801 - 96900 of 169464 in total
Download CSV  
Show/hide fields
All
None
Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G03350 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 5 3 4 1 62.50% 20.00% 8 5 TAIR8 Avg. embryo expression (dissected): '31.2934'
Avg. embryo expression (LCM): '11.6292'
AT3G03350 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.31038 x 10-1 19 7 7 29 73.08% 80.56% 26 36 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.212728'
Avg. expression score for this sample: '30.0894'
Avg. expression score in LCM sample: '35.3779'
Tissue used: 'full endosperm'
AT3G03350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 7 2 2 5 77.78% 71.43% 9 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.212728'
Avg. expression score for this sample: '22.4918'
Avg. expression score in LCM sample: '35.3779'
Tissue used: 'pure endosperm, no chalazal'
AT3G03341 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.50082'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G03341 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03341 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03341 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '11.3398'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G03341 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '8.47893'
Avg. embryo expression (LCM): '0'
AT3G03341 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03340 UNE6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.2 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03340 UNE6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '90.4866'
Avg. expression score in LCM sample: '45.9898'
Tissue used: 'full endosperm'
AT3G03340 UNE6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '233.023'
Avg. embryo expression (LCM): '90.9115'
AT3G03340 UNE6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '152.006'
Avg. expression score in LCM sample: '45.9898'
Tissue used: 'pure endosperm, no chalazal'
AT3G03340 UNE6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.2 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03340 UNE6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03330 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.79064 x 10-1 169 54 75.78% 223 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03330 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.4 x 10-6 209 33 86.36% 242 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03330 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.30373 x 10-1 81 135 10 28 37.50% 73.68% 216 38 TAIR8 Avg. embryo expression (dissected): '206.367'
Avg. embryo expression (LCM): '124.016'
AT3G03330 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.221 x 10-3 68 9 88.31% 77 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.385 x 10-3 122 92 55 302 57.01% 84.59% 214 357 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.014098'
Avg. expression score for this sample: '206.505'
Avg. expression score in LCM sample: '73.7247'
Tissue used: 'full endosperm'
AT3G03330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.99088 x 10-1 118 91 36 160 56.46% 81.63% 209 196 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.014098'
Avg. expression score for this sample: '224.332'
Avg. expression score in LCM sample: '73.7247'
Tissue used: 'pure endosperm, no chalazal'
AT3G03320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 1 1 3 75.00% 75.00% 4 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '10.9924'
Avg. expression score in LCM sample: '5.55581'
Tissue used: 'pure endosperm, no chalazal'
AT3G03320 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 9 3 75.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03320 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.10247 x 10-1 13 3 81.25% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 9 2 7 11 81.82% 61.11% 11 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '27.9511'
Avg. expression score in LCM sample: '5.55581'
Tissue used: 'full endosperm'
AT3G03320 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 5 3 0 0 62.50% 8 0 TAIR8 Avg. embryo expression (dissected): '19.6052'
Avg. embryo expression (LCM): '27.2772'
AT3G03320 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 5 2 71.43% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03310 LCAT3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03310 LCAT3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '77.4424'
Avg. expression score in LCM sample: '5.42353'
Tissue used: 'full endosperm'
AT3G03310 LCAT3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '17.8268'
Avg. embryo expression (LCM): '22.4296'
AT3G03310 LCAT3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '17.6719'
Avg. expression score in LCM sample: '5.42353'
Tissue used: 'pure endosperm, no chalazal'
AT3G03310 LCAT3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03310 LCAT3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03305 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 13 7 65.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03305 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.29328 x 10-1 10 1 90.91% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03305 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Avg. embryo expression (dissected): '113.63'
Avg. embryo expression (LCM): '74.1082'
AT3G03305 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.50447 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03305 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 8 0 6 3 100.00% 33.33% 8 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '165.121'
Avg. expression score in LCM sample: '99.8723'
Tissue used: 'full endosperm'
AT3G03305 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 0 2 3 100.00% 60.00% 4 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '178.719'
Avg. expression score in LCM sample: '99.8723'
Tissue used: 'pure endosperm, no chalazal'
AT3G03300 DCL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.87081 x 10-1 6 9 3 11 40.00% 78.57% 15 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.773627'
Avg. expression score for this sample: '201.488'
Avg. expression score in LCM sample: '212.017'
Tissue used: 'pure endosperm, no chalazal'
AT3G03300 DCL2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.3 x 10-6 68 3 95.77% 71 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03300 DCL2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.49 x 10-3 40 3 93.02% 43 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03300 DCL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.95217 x 10-1 27 7 15 33 79.41% 68.75% 34 48 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.773627'
Avg. expression score for this sample: '378.25'
Avg. expression score in LCM sample: '212.017'
Tissue used: 'full endosperm'
AT3G03300 DCL2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.45653 x 10-1 14 12 4 8 53.85% 66.67% 26 12 TAIR8 Avg. embryo expression (dissected): '364.377'
Avg. embryo expression (LCM): '332.94'
AT3G03300 DCL2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.45009 x 10-1 3 2 60.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03290 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.61111 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 4 5 0 2 44.44% 100.00% 9 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.38742'
Avg. expression score in LCM sample: '8.93633'
Tissue used: 'full endosperm'
AT3G03290 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 1 1 0 0.00% 0.00% 1 1 TAIR8 Avg. embryo expression (dissected): '1.25883'
Avg. embryo expression (LCM): '0'
AT3G03290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 9 4 3 8 69.23% 72.73% 13 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '7.2194'
Avg. expression score in LCM sample: '8.93633'
Tissue used: 'pure endosperm, no chalazal'
AT3G03290 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03290 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03280 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03280 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03280 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '.312847'
Avg. embryo expression (LCM): '0'
AT3G03280 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0625 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.6584 x 10-2 11 0 0 1 100.00% 100.00% 11 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.021073'
Avg. expression score for this sample: '2.33959'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G03280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 0 0 0 100.00% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.021073'
Avg. expression score for this sample: '1.38154'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G03272 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G03272 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03272 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03272 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G03272 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G03272 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03270 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '683.156'
Avg. expression score in LCM sample: '437.851'
Tissue used: 'full endosperm'
AT3G03270 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '766.438'
Avg. embryo expression (LCM): '201.992'
AT3G03270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1298.23'
Avg. expression score in LCM sample: '437.851'
Tissue used: 'pure endosperm, no chalazal'
AT3G03270 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03270 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03260 HDG8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.04 x 10-4 757 618 55.05% 1375 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03260 HDG8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.30482 x 10-1 583 177 76.71% 760 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03260 HDG8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G03260 HDG8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03260 HDG8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.158 x 10-3 16 0 0 4 100.00% 100.00% 16 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.040215'
Avg. expression score for this sample: '3.14144'
Avg. expression score in LCM sample: '5.04138'
Tissue used: 'full endosperm'
AT3G03260 HDG8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 2 0 100.00% 0.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.040215'
Avg. expression score for this sample: '.332944'
Avg. expression score in LCM sample: '5.04138'
Tissue used: 'pure endosperm, no chalazal'
AT3G03250 UGP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 3 100.00% 100.00% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.232829'
Avg. expression score for this sample: '111.218'
Avg. expression score in LCM sample: '53.956'
Tissue used: 'pure endosperm, no chalazal'
AT3G03250 UGP1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.5 x 10-4 105 6 94.59% 111 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03250 UGP1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.45868 x 10-1 45 16 73.77% 61 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03250 UGP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.32302 x 10-1 31 5 15 30 86.11% 66.67% 36 45 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.232829'
Avg. expression score for this sample: '105.864'
Avg. expression score in LCM sample: '53.956'
Tissue used: 'full endosperm'
AT3G03250 UGP1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 4 1 1 0 80.00% 0.00% 5 1 TAIR8 Avg. embryo expression (dissected): '44.4118'
Avg. embryo expression (LCM): '42.8122'
AT3G03250 UGP1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03240 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.62337 x 10-1 6 8 42.86% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.94643 x 10-1 106 16 83 47 86.89% 36.15% 122 130 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.182177'
Avg. expression score for this sample: '165.205'
Avg. expression score in LCM sample: '32.0562'
Tissue used: 'full endosperm'
AT3G03240 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G03240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 11 3 5 3 78.57% 37.50% 14 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.182177'
Avg. expression score for this sample: '44.1473'
Avg. expression score in LCM sample: '32.0562'
Tissue used: 'pure endosperm, no chalazal'
AT3G03240 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.55 x 10-3 39 50 43.82% 89 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03240 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.2 x 10-8 475 123 79.43% 598 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03230 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2492 x 10-2 82 23 78.10% 105 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03230 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.5 x 10-8 40 73 35.40% 113 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03230 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 2 0 0.00% 0 2 TAIR8 Avg. embryo expression (dissected): '6.1294'
Avg. embryo expression (LCM): '0'
AT3G03230 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.1933 x 10-2 16 18 47.06% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.00724 x 10-1 110 39 72 72 73.83% 50.00% 149 144 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.695624'
Avg. expression score for this sample: '172.367'
Avg. expression score in LCM sample: '55.4405'
Tissue used: 'full endosperm'
AT3G03230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.94402 x 10-1 45 2 14 9 95.74% 39.13% 47 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.695624'
Avg. expression score for this sample: '87.8294'
Avg. expression score in LCM sample: '55.4405'
Tissue used: 'pure endosperm, no chalazal'
AT3G03220 EXPA13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.68113 x 10-1 99 61 67 103 61.88% 60.59% 160 170 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.491417'
Avg. expression score for this sample: '182.081'
Avg. expression score in LCM sample: '134.192'
Tissue used: 'pure endosperm, no chalazal'
AT3G03220 EXPA13 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.744 x 10-3 81 22 78.64% 103 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03220 EXPA13 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.3 x 10-8 194 40 82.91% 234 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G03220 EXPA13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.01569 x 10-1 182 85 109 214 68.16% 66.25% 267 323 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.491417'
Avg. expression score for this sample: '207.555'
Avg. expression score in LCM sample: '134.192'
Tissue used: 'full endosperm'
AT3G03220 EXPA13 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.58599 x 10-1 95 94 29 34 50.26% 53.97% 189 63 TAIR8 Avg. embryo expression (dissected): '215.432'
Avg. embryo expression (LCM): '228.24'
AT3G03220 EXPA13 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.52 x 10-4 71 15 82.56% 86 TAIR8 Mutant effect: 'N/A (not a MEG)'