Displaying data sets 96101 - 96200 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G04390 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 2 0 0 33.33% 3 0 TAIR8 Avg. embryo expression (dissected): '3.65951'
Avg. embryo expression (LCM): '0'
AT3G04390 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04380 SUVR4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.78 x 10-4 59 5 92.19% 64 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04380 SUVR4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 16 7 6 13 69.57% 68.42% 23 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.884482'
Avg. expression score for this sample: '40.4178'
Avg. expression score in LCM sample: '10.6266'
Tissue used: 'pure endosperm, no chalazal'
AT3G04380 SUVR4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.54368 x 10-1 8 5 61.54% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04380 SUVR4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.1593 x 10-1 16 8 5 3 66.67% 37.50% 24 8 TAIR8 Avg. embryo expression (dissected): '60.2388'
Avg. embryo expression (LCM): '40.5265'
AT3G04380 SUVR4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 30 7 14 15 81.08% 51.72% 37 29 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.884482'
Avg. expression score for this sample: '78.4887'
Avg. expression score in LCM sample: '10.6266'
Tissue used: 'full endosperm'
AT3G04380 SUVR4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 6 2 75.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04370 PDLP4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04370 PDLP4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G04370 PDLP4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.1677 x 10-1 0 1 0 11 0.00% 100.00% 1 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.31677'
Avg. expression score for this sample: '4.01776'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G04370 PDLP4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04370 PDLP4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04370 PDLP4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.31677'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G04360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.87039 x 10-1 2 0 21 53 100.00% 71.62% 2 74 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.318491'
Avg. expression score for this sample: '63.195'
Avg. expression score in LCM sample: '9.00982'
Tissue used: 'pure endosperm, no chalazal'
AT3G04360 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 6 2 75.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.69197 x 10-1 0 5 5 32 0.00% 86.49% 5 37 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.318491'
Avg. expression score for this sample: '35.2234'
Avg. expression score in LCM sample: '9.00982'
Tissue used: 'full endosperm'
AT3G04360 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04360 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.49917 x 10-1 0 2 1 7 0.00% 87.50% 2 8 TAIR8 Avg. embryo expression (dissected): '27.3928'
Avg. embryo expression (LCM): '3.85548'
AT3G04360 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.416 x 10-3 11 16 40.74% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04350 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.2 x 10-9 90 4 95.74% 94 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04350 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.0 x 10-5 53 4 92.98% 57 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.12206 x 10-1 60 37 23 67 61.86% 74.44% 97 90 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.425885'
Avg. expression score for this sample: '111.644'
Avg. expression score in LCM sample: '85.4243'
Tissue used: 'pure endosperm, no chalazal'
AT3G04350 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.159 x 10-2 31 17 6 17 64.58% 73.91% 48 23 TAIR8 Avg. embryo expression (dissected): '67.3184'
Avg. embryo expression (LCM): '51.2641'
AT3G04350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.57044 x 10-1 62 23 27 65 72.94% 70.65% 85 92 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.425885'
Avg. expression score for this sample: '131.249'
Avg. expression score in LCM sample: '85.4243'
Tissue used: 'full endosperm'
AT3G04350 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.4466 x 10-2 40 9 81.63% 49 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04340 emb2458 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04340 emb2458 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.70916 x 10-1 8 11 4 2 42.11% 33.33% 19 6 TAIR8 Avg. embryo expression (dissected): '319.184'
Avg. embryo expression (LCM): '214.877'
AT3G04340 emb2458 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.61428 x 10-1 19 6 12 33 76.00% 73.33% 25 45 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.502672'
Avg. expression score for this sample: '138.214'
Avg. expression score in LCM sample: '39.5374'
Tissue used: 'full endosperm'
AT3G04340 emb2458 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.1267 x 10-1 41 9 82.00% 50 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04340 emb2458 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 3 2 2 57.14% 50.00% 7 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.502672'
Avg. expression score for this sample: '97.1848'
Avg. expression score in LCM sample: '39.5374'
Tissue used: 'pure endosperm, no chalazal'
AT3G04340 emb2458 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.09638 x 10-1 37 10 78.72% 47 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04330 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.28538'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G04330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.595157'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G04330 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04330 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '1.91001'
Avg. embryo expression (LCM): '0'
AT3G04330 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04320 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G04320 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04320 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.333704'
Avg. embryo expression (LCM): '0'
AT3G04320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G04320 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04310 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.96638 x 10-1 51 22 69.86% 73 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04310 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.53971 x 10-1 135 105 31 31 56.25% 50.00% 240 62 TAIR8 Avg. embryo expression (dissected): '293.761'
Avg. embryo expression (LCM): '155.425'
AT3G04310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.602 x 10-3 149 46 64 183 76.41% 74.09% 195 247 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.0e-06'
Avg. expression score for this sample: '246.781'
Avg. expression score in LCM sample: '121.875'
Tissue used: 'full endosperm'
AT3G04310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.4 x 10-5 172 46 60 217 78.90% 78.34% 218 277 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.0e-06'
Avg. expression score for this sample: '352.157'
Avg. expression score in LCM sample: '121.875'
Tissue used: 'pure endosperm, no chalazal'
AT3G04310 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.9 x 10-20 254 4 98.45% 258 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04310 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.2296 x 10-2 149 27 84.66% 176 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04300 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '7.39423'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G04300 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04300 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.208'
Avg. embryo expression (LCM): '1.74564'
AT3G04300 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.20641'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G04290 LTL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.172206'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G04290 LTL1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04290 LTL1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04290 LTL1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '6.39933'
Avg. embryo expression (LCM): '3.37826'
AT3G04290 LTL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.233752'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G04290 LTL1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04280 RR22 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04280 RR22 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '6.52265'
Avg. embryo expression (LCM): '0'
AT3G04280 RR22 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.63 x 10-4 16 0 0 20 100.00% 100.00% 16 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000033'
Avg. expression score for this sample: '335.405'
Avg. expression score in LCM sample: '40.625'
Tissue used: 'full endosperm'
AT3G04280 RR22 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 142 1 99.30% 143 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04280 RR22 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.54545 x 10-1 2 0 0 4 100.00% 100.00% 2 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000033'
Avg. expression score for this sample: '86.3406'
Avg. expression score in LCM sample: '40.625'
Tissue used: 'pure endosperm, no chalazal'
AT3G04280 RR22 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 30 0 100.00% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04270 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.949595'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G04270 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04270 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G04270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G04270 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04260 PTAC3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04260 PTAC3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '163.043'
Avg. expression score in LCM sample: '27.5292'
Tissue used: 'pure endosperm, no chalazal'
AT3G04260 PTAC3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04260 PTAC3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Avg. embryo expression (dissected): '693.508'
Avg. embryo expression (LCM): '413.918'
AT3G04260 PTAC3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '174.204'
Avg. expression score in LCM sample: '27.5292'
Tissue used: 'full endosperm'
AT3G04260 PTAC3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04250 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04250 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '5.72671'
AT3G04250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.618206'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G04250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.593403'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G04250 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04250 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04240 SEC endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.46538 x 10-1 157 64 71.04% 221 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04240 SEC endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.59523 x 10-1 75 34 64 112 68.81% 63.64% 109 176 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.696798'
Avg. expression score for this sample: '104.484'
Avg. expression score in LCM sample: '65.7144'
Tissue used: 'full endosperm'
AT3G04240 SEC endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.32836 x 10-1 23 7 76.67% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04240 SEC embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.39999 x 10-1 15 18 8 8 45.45% 50.00% 33 16 TAIR8 Avg. embryo expression (dissected): '76.2305'
Avg. embryo expression (LCM): '76.2682'
AT3G04240 SEC endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.1 x 10-9 186 29 86.51% 215 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04240 SEC endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.42288 x 10-1 28 11 19 23 71.79% 54.76% 39 42 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.696798'
Avg. expression score for this sample: '65.1987'
Avg. expression score in LCM sample: '65.7144'
Tissue used: 'pure endosperm, no chalazal'
AT3G04230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '118.462'
Avg. expression score in LCM sample: '68.1101'
Tissue used: 'pure endosperm, no chalazal'
AT3G04230 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04230 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04230 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '39.9583'
Avg. embryo expression (LCM): '54.4414'
AT3G04230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '53.6949'
Avg. expression score in LCM sample: '68.1101'
Tissue used: 'full endosperm'
AT3G04230 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04220 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04220 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'