Displaying data sets 96001 - 96100 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G04530 PPCK2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.047826'
Avg. expression score for this sample: '.755817'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G04530 PPCK2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 2 0 0 0.00% 2 0 TAIR8 Avg. embryo expression (dissected): '2.72142'
Avg. embryo expression (LCM): '0'
AT3G04530 PPCK2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04530 PPCK2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1696 x 10-2 4 4 50.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04530 PPCK2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.6584 x 10-2 6 0 0 6 100.00% 100.00% 6 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.047826'
Avg. expression score for this sample: '3.48772'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G04530 PPCK2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.2237 x 10-2 30 17 63.83% 47 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04525 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04525 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G04525 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04525 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G04525 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G04525 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04520 THA2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04520 THA2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.69597 x 10-1 66 51 11 10 56.41% 47.62% 117 21 TAIR8 Avg. embryo expression (dissected): '65.8295'
Avg. embryo expression (LCM): '72.1239'
AT3G04520 THA2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0978 52 12 81.25% 64 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04520 THA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.28282 x 10-1 6 7 1 3 46.15% 75.00% 13 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '8.27117'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G04520 THA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.33718 x 10-1 6 5 0 10 54.55% 100.00% 11 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '10.9173'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G04520 THA2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.65173 x 10-1 20 5 80.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04510 LSH2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04510 LSH2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 3 0 0 0 100.00% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.72698'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G04510 LSH2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04510 LSH2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G04510 LSH2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04510 LSH2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G04500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '17.0058'
Avg. expression score in LCM sample: '2.68972'
Tissue used: 'pure endosperm, no chalazal'
AT3G04500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '29.1927'
Avg. expression score in LCM sample: '2.68972'
Tissue used: 'full endosperm'
AT3G04500 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04500 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04500 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '19.6745'
Avg. embryo expression (LCM): '24.0874'
AT3G04500 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04490 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04490 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 0 1 0 100.00% 0.00% 1 1 TAIR8 Avg. embryo expression (dissected): '38.2882'
Avg. embryo expression (LCM): '25.7702'
AT3G04490 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 2 50.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 1 0 0 50.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '28.8868'
Avg. expression score in LCM sample: '18.6664'
Tissue used: 'pure endosperm, no chalazal'
AT3G04490 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '21.2008'
Avg. expression score in LCM sample: '18.6664'
Tissue used: 'full endosperm'
AT3G04485 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.82043 x 10-1 3 0 1 6 100.00% 85.71% 3 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.31677'
Avg. expression score for this sample: '7.61558'
Avg. expression score in LCM sample: '3.36582'
Tissue used: 'full endosperm'
AT3G04485 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.44444 x 10-1 15 0 100.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04485 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04485 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.08392 x 10-1 4 2 0 1 66.67% 100.00% 6 1 TAIR8 Avg. embryo expression (dissected): '12.7079'
Avg. embryo expression (LCM): '4.30759'
AT3G04485 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04485 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.31677'
Avg. expression score for this sample: '8.87161'
Avg. expression score in LCM sample: '3.36582'
Tissue used: 'pure endosperm, no chalazal'
AT3G04480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.222 x 10-2 3 10 6 5 23.08% 45.45% 13 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.29364'
Avg. expression score for this sample: '14.0313'
Avg. expression score in LCM sample: '8.53949'
Tissue used: 'pure endosperm, no chalazal'
AT3G04480 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.53 x 10-4 24 1 96.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 9 10 4 22 47.37% 84.62% 19 26 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.29364'
Avg. expression score for this sample: '13.5132'
Avg. expression score in LCM sample: '8.53949'
Tissue used: 'full endosperm'
AT3G04480 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1862 x 10-2 26 5 83.87% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04480 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.28656 x 10-1 7 13 5 4 35.00% 44.44% 20 9 TAIR8 Avg. embryo expression (dissected): '24.742'
Avg. embryo expression (LCM): '23.359'
AT3G04480 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.11158 x 10-1 8 3 72.73% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04470 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.4189 x 10-2 19 3 86.36% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04470 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.77272 x 10-1 42 29 19 14 59.15% 42.42% 71 33 TAIR8 Avg. embryo expression (dissected): '802.411'
Avg. embryo expression (LCM): '612.155'
AT3G04470 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.9 x 10-9 145 11 92.95% 156 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.68314 x 10-1 39 20 17 25 66.10% 59.52% 59 42 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.637254'
Avg. expression score for this sample: '508.443'
Avg. expression score in LCM sample: '340.271'
Tissue used: 'pure endosperm, no chalazal'
AT3G04470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.25038 x 10-1 47 13 30 66 78.33% 68.75% 60 96 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.637254'
Avg. expression score for this sample: '542.574'
Avg. expression score in LCM sample: '340.271'
Tissue used: 'full endosperm'
AT3G04470 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.902 x 10-3 87 17 83.65% 104 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04460 PEX12 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04460 PEX12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.44444 x 10-1 2 0 0 3 100.00% 100.00% 2 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '17.2224'
Avg. expression score in LCM sample: '16.3'
Tissue used: 'full endosperm'
AT3G04460 PEX12 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 2 2 50.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04460 PEX12 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '18.3303'
Avg. embryo expression (LCM): '18.323'
AT3G04460 PEX12 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04460 PEX12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '9.81325'
Avg. expression score in LCM sample: '16.3'
Tissue used: 'pure endosperm, no chalazal'
AT3G04450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 1 0 2 50.00% 100.00% 2 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.67273'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G04450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 0 0 0 100.00% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '4.49495'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G04450 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04450 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04450 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Avg. embryo expression (dissected): '5.84713'
Avg. embryo expression (LCM): '7.15839'
AT3G04450 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04440 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04440 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3.75684'
Avg. embryo expression (LCM): '3.12709'
AT3G04440 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '5.94472'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G04440 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '6.0836'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G04430 NAC049 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G04430 NAC049 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04430 NAC049 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04430 NAC049 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G04430 NAC049 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04430 NAC049 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G04420 NAC048 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.9965 x 10-1 12 4 6 15 75.00% 71.43% 16 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '39.5214'
Avg. expression score in LCM sample: '25.0893'
Tissue used: 'pure endosperm, no chalazal'
AT3G04420 NAC048 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.10841 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04420 NAC048 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.51317 x 10-1 5 2 7 7 71.43% 50.00% 7 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '14.6917'
Avg. expression score in LCM sample: '25.0893'
Tissue used: 'full endosperm'
AT3G04420 NAC048 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.2753 x 10-2 12 1 92.31% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04420 NAC048 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 1 1 0 0.00% 0.00% 1 1 TAIR8 Avg. embryo expression (dissected): '4.3661'
Avg. embryo expression (LCM): '.979569'
AT3G04420 NAC048 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04410 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04410 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '7.7694'
Avg. embryo expression (LCM): '0'
AT3G04410 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.11971'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G04410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '6.92992'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G04410 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04400 emb2171 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.906 x 10-3 138 103 57.26% 241 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04400 emb2171 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.24029 x 10-1 193 41 79 89 82.48% 52.98% 234 168 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.518068'
Avg. expression score for this sample: '3090.13'
Avg. expression score in LCM sample: '1037.5'
Tissue used: 'full endosperm'
AT3G04400 emb2171 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.2 x 10-12 249 33 88.30% 282 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04400 emb2171 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.6 x 10-8 430 187 73 37 69.69% 33.64% 617 110 TAIR8 Avg. embryo expression (dissected): '5974.38'
Avg. embryo expression (LCM): '8435.19'
AT3G04400 emb2171 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.6929 x 10-2 53 41 56.38% 94 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04400 emb2171 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 203 48 81 51 80.88% 38.64% 251 132 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.518068'
Avg. expression score for this sample: '2935.09'
Avg. expression score in LCM sample: '1037.5'
Tissue used: 'pure endosperm, no chalazal'
AT3G04390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 1 0.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.17193'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G04390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.5204'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G04390 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G04390 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'