GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G301297	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	8	0	5	0.00%	100.00%	8	5	RefGen V2	χ2 p-value for B73 x Mo17: '.0046777' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: ''
GRMZM2G301297	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.828 x 10^-4	0	21	0	28	0.00%	100.00%	21	28	RefGen V2	χ2 p-value for B73 x Mo17: '9.12e-11' χ2 p-value for Mo17 x B73: '.0001828' Biased in favor of strain: 'Mo17'
GRMZM2G301246	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.7 x 10^-12	302	53	149	131	85.07%	46.79%	355	280	RefGen V2	χ2 p-value for B73 x Mo17: '1.90e-13' χ2 p-value for Mo17 x B73: '1.70e-12' Biased in favor of strain: 'B73'
GRMZM2G301246	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.9 x 10^-12	391	181	335	177	68.36%	34.57%	572	512	RefGen V2	χ2 p-value for B73 x Mo17: '1.63e-18' χ2 p-value for Mo17 x B73: '2.90e-12' Biased in favor of strain: 'B73'
GRMZM2G301208	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.75325 x 10^-1	549	505	604	479	52.09%	44.23%	1054	1083	RefGen V2	χ2 p-value for B73 x Mo17: '.175325' χ2 p-value for Mo17 x B73: '.0001457' Biased in favor of strain: ''
GRMZM2G301208	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.1212 x 10^-3	543	437	249	635	55.41%	71.83%	980	884	RefGen V2	χ2 p-value for B73 x Mo17: '7.62e-14' χ2 p-value for Mo17 x B73: '.0011212' Biased in favor of strain: 'Mo17'
GRMZM2G301194	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	0	0	0.00%		1	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G301194	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.637029 x 10^-1	7	16	5	7	30.43%	58.33%	23	12	RefGen V2	χ2 p-value for B73 x Mo17: '.0605689' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: ''
GRMZM2G301172	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.57 x 10^-25	50	228	54	230	17.99%	80.99%	278	284	RefGen V2	χ2 p-value for B73 x Mo17: '1.32e-26' χ2 p-value for Mo17 x B73: '1.57e-25' Biased in favor of strain: 'Mo17'
GRMZM2G301172	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.37 x 10^-18	12	146	14	215	7.59%	93.89%	158	229	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '2.37e-18' Biased in favor of strain: 'Mo17'
GRMZM2G301124	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		10	6	3	5	62.50%	62.50%	16	8	RefGen V2	χ2 p-value for B73 x Mo17: '.7236585' χ2 p-value for Mo17 x B73: '.8025872' Biased in favor of strain: ''
GRMZM2G301124	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.774686 x 10^-1	22	11	16	13	66.67%	44.83%	33	29	RefGen V2	χ2 p-value for B73 x Mo17: '.0555111' χ2 p-value for Mo17 x B73: '.5774686' Biased in favor of strain: ''
GRMZM2G301122	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.54 x 10^-8	135	239	80	222	36.10%	73.51%	374	302	RefGen V2	χ2 p-value for B73 x Mo17: '7.54e-08' χ2 p-value for Mo17 x B73: '3.05e-16' Biased in favor of strain: 'Mo17'
GRMZM2G301122	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.2884 x 10^-3	217	48	87	113	81.89%	56.50%	265	200	RefGen V2	χ2 p-value for B73 x Mo17: '1.47e-07' χ2 p-value for Mo17 x B73: '.0022884' Biased in favor of strain: 'B73'
GRMZM2G301098	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.52913 x 10^-1	133	83	92	86	61.57%	48.31%	216	178	RefGen V2	χ2 p-value for B73 x Mo17: '.0006688' χ2 p-value for Mo17 x B73: '.652913' Biased in favor of strain: ''
GRMZM2G301098	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.755634 x 10^-1	114	49	81	97	69.94%	54.49%	163	178	RefGen V2	χ2 p-value for B73 x Mo17: '.3755634' χ2 p-value for Mo17 x B73: '.0005711' Biased in favor of strain: ''
GRMZM2G301089	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	2	4	6	33.33%	60.00%	3	10	RefGen V2	χ2 p-value for B73 x Mo17: '.2206667' χ2 p-value for Mo17 x B73: '.6547207' Biased in favor of strain: ''
GRMZM2G301089	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		255	101	3	5	71.63%	62.50%	356	8	RefGen V2	χ2 p-value for B73 x Mo17: '3.30e-16' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G301071	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.72 x 10^-28	631	298	655	299	67.92%	31.34%	929	954	RefGen V2	χ2 p-value for B73 x Mo17: '8.72e-28' χ2 p-value for Mo17 x B73: '9.77e-31' Biased in favor of strain: 'B73'
GRMZM2G301071	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.3 x 10^-22	607	120	467	311	83.49%	39.97%	727	778	RefGen V2	χ2 p-value for B73 x Mo17: '6.30e-22' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G300965	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.74 x 10^-5	705	263	432	598	72.83%	58.06%	968	1030	RefGen V2	χ2 p-value for B73 x Mo17: '.0000474' χ2 p-value for Mo17 x B73: '4.61e-09' Biased in favor of strain: 'B73'
GRMZM2G300965	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.913413 x 10^-1	896	799	200	227	52.86%	53.16%	1695	427	RefGen V2	χ2 p-value for B73 x Mo17: '.0184698' χ2 p-value for Mo17 x B73: '.1913413' Biased in favor of strain: ''
GRMZM2G300955	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.644354 x 10^-1	354	378	316	327	48.36%	50.86%	732	643	RefGen V2	χ2 p-value for B73 x Mo17: '.3750436' χ2 p-value for Mo17 x B73: '.6644354' Biased in favor of strain: ''
GRMZM2G300955	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.741705 x 10^-1	695	326	428	848	68.07%	66.46%	1021	1276	RefGen V2	χ2 p-value for B73 x Mo17: '.3413905' χ2 p-value for Mo17 x B73: '.8741705' Biased in favor of strain: ''
GRMZM2G300945	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.47203 x 10^-1	37	12	27	50	75.51%	64.94%	49	77	RefGen V2	χ2 p-value for B73 x Mo17: '.1891258' χ2 p-value for Mo17 x B73: '.747203' Biased in favor of strain: ''
GRMZM2G300945	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.128811 x 10^-1	80	65	63	80	55.17%	55.94%	145	143	RefGen V2	χ2 p-value for B73 x Mo17: '.2128811' χ2 p-value for Mo17 x B73: '.1551391' Biased in favor of strain: ''
GRMZM2G300944	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.994263 x 10^-1	48	40	27	31	54.55%	53.45%	88	58	RefGen V2	χ2 p-value for B73 x Mo17: '.3937686' χ2 p-value for Mo17 x B73: '.5994263' Biased in favor of strain: ''
GRMZM2G300944	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.366878 x 10^-1	56	22	33	52	71.79%	61.18%	78	85	RefGen V2	χ2 p-value for B73 x Mo17: '.3366878' χ2 p-value for Mo17 x B73: '.2829341' Biased in favor of strain: ''
GRMZM2G300924	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.839064 x 10^-1	42	18	0	36	70.00%	100.00%	60	36	RefGen V2	χ2 p-value for B73 x Mo17: '.5839064' χ2 p-value for Mo17 x B73: '.0000221' Biased in favor of strain: ''
GRMZM2G300924	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.701149 x 10^-1	27	34	6	20	44.26%	76.92%	61	26	RefGen V2	χ2 p-value for B73 x Mo17: '.3701149' χ2 p-value for Mo17 x B73: '.0060396' Biased in favor of strain: ''
GRMZM2G300916	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	1		50.00%	0	2	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G300916	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	3		100.00%	0	3	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G300866	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.44704 x 10^-1	29	22	22	34	56.86%	60.71%	51	56	RefGen V2	χ2 p-value for B73 x Mo17: '.1374749' χ2 p-value for Mo17 x B73: '.344704' Biased in favor of strain: ''
GRMZM2G300866	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.729093 x 10^-1	104	98	75	86	51.49%	53.42%	202	161	RefGen V2	χ2 p-value for B73 x Mo17: '.6729093' χ2 p-value for Mo17 x B73: '.385985' Biased in favor of strain: ''
GRMZM2G300812	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	2	6	1	0.00%	14.29%	2	7	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.0587817' Biased in favor of strain: ''
GRMZM2G300812	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	6	1	50.00%	14.29%	2	7	RefGen V2	χ2 p-value for B73 x Mo17: '.6170692' χ2 p-value for Mo17 x B73: '.0032835' Biased in favor of strain: ''
GRMZM2G300801	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.31217 x 10^-2	3306	1531	2103	3631	68.35%	63.32%	4837	5734	RefGen V2	χ2 p-value for B73 x Mo17: '.0131217' χ2 p-value for Mo17 x B73: '7.90e-08' Biased in favor of strain: ''
GRMZM2G300801	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	10363	7463	11134	7955	58.13%	41.67%	17826	19089	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G300788	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.8284 x 10^-3	877	723	1020	884	54.81%	46.43%	1600	1904	RefGen V2	χ2 p-value for B73 x Mo17: '.0001181' χ2 p-value for Mo17 x B73: '.0018284' Biased in favor of strain: 'B73'
GRMZM2G300788	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.3895 x 10^-3	355	133	159	231	72.75%	59.23%	488	390	RefGen V2	χ2 p-value for B73 x Mo17: '.0043895' χ2 p-value for Mo17 x B73: '.0018388' Biased in favor of strain: 'B73'
GRMZM2G300786	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.53 x 10^-13	131	6	131	36	95.62%	21.56%	137	167	RefGen V2	χ2 p-value for B73 x Mo17: '6.53e-13' χ2 p-value for Mo17 x B73: '3.98e-35' Biased in favor of strain: 'B73'
GRMZM2G300786	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.36 x 10^-16	651	241	540	302	72.98%	35.87%	892	842	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '2.36e-16' Biased in favor of strain: 'B73'
GRMZM2G300709	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.19 x 10^-5	1022	710	811	656	59.01%	44.72%	1732	1467	RefGen V2	χ2 p-value for B73 x Mo17: '6.54e-14' χ2 p-value for Mo17 x B73: '.0000519' Biased in favor of strain: 'B73'
GRMZM2G300709	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.95084 x 10^-2	83	11	52	70	88.30%	57.38%	94	122	RefGen V2	χ2 p-value for B73 x Mo17: '8.63e-06' χ2 p-value for Mo17 x B73: '.0295084' Biased in favor of strain: ''
GRMZM2G300589	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.506044 x 10^-1	348	175	164	436	66.54%	72.67%	523	600	RefGen V2	χ2 p-value for B73 x Mo17: '.9506044' χ2 p-value for Mo17 x B73: '.0018227' Biased in favor of strain: ''
GRMZM2G300589	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.682351 x 10^-1	122	71	95	101	63.21%	51.53%	193	196	RefGen V2	χ2 p-value for B73 x Mo17: '.0002415' χ2 p-value for Mo17 x B73: '.6682351' Biased in favor of strain: ''
GRMZM2G300569	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.485063 x 10^-1	16	1	11	14	94.12%	56.00%	17	25	RefGen V2	χ2 p-value for B73 x Mo17: '.0002747' χ2 p-value for Mo17 x B73: '.5485063' Biased in favor of strain: ''
GRMZM2G300569	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G300500	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.13 x 10^-9	798	259	429	464	75.50%	51.96%	1057	893	RefGen V2	χ2 p-value for B73 x Mo17: '1.13e-09' χ2 p-value for Mo17 x B73: '1.13e-20' Biased in favor of strain: 'B73'
GRMZM2G300500	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.14 x 10^-8	540	352	515	356	60.54%	40.87%	892	871	RefGen V2	χ2 p-value for B73 x Mo17: '3.08e-10' χ2 p-value for Mo17 x B73: '7.14e-08' Biased in favor of strain: 'B73'
GRMZM2G300424	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	1	0	100.00%	0.00%	3	1	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G300424	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	0	100.00%		1	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G300408	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.40226 x 10^-2	83	60	37	104	58.04%	73.76%	143	141	RefGen V2	χ2 p-value for B73 x Mo17: '.0286754' χ2 p-value for Mo17 x B73: '.0740226' Biased in favor of strain: ''
GRMZM2G300408	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.92849 x 10^-1	25	23	30	28	52.08%	48.28%	48	58	RefGen V2	χ2 p-value for B73 x Mo17: '.77283' χ2 p-value for Mo17 x B73: '.792849' Biased in favor of strain: ''
GRMZM2G300375	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.95 x 10^-10	329	186	365	209	63.88%	36.41%	515	574	RefGen V2	χ2 p-value for B73 x Mo17: '2.95e-10' χ2 p-value for Mo17 x B73: '7.45e-11' Biased in favor of strain: 'B73'
GRMZM2G300375	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.88845 x 10^-2	193	73	102	159	72.56%	60.92%	266	261	RefGen V2	χ2 p-value for B73 x Mo17: '.0415862' χ2 p-value for Mo17 x B73: '.0488845' Biased in favor of strain: ''
GRMZM2G300348	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.76706 x 10^-2	157	57	56	57	73.36%	50.44%	214	113	RefGen V2	χ2 p-value for B73 x Mo17: '.0376706' χ2 p-value for Mo17 x B73: '.0002537' Biased in favor of strain: ''
GRMZM2G300348	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	7	4	1	46.15%	20.00%	13	5	RefGen V2	χ2 p-value for B73 x Mo17: '.7815113' χ2 p-value for Mo17 x B73: '.1797125' Biased in favor of strain: ''
GRMZM2G300135	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	422	38	317	17	91.74%	5.09%	460	334	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G300135	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.53478 x 10^-2	10	0	22	0	100.00%	0.00%	10	22	RefGen V2	χ2 p-value for B73 x Mo17: '.0253478' χ2 p-value for Mo17 x B73: '3.28e-11' Biased in favor of strain: ''
GRMZM2G300133	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	0	0	100.00%		2	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G300133	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.61 x 10^-13	410	210	403	219	66.13%	35.21%	620	622	RefGen V2	χ2 p-value for B73 x Mo17: '9.57e-16' χ2 p-value for Mo17 x B73: '1.61e-13' Biased in favor of strain: 'B73'
GRMZM2G300119	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		8	0	3	0	100.00%	0.00%	8	3	RefGen V2	χ2 p-value for B73 x Mo17: '.0046777' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G300119	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	1	0	100.00%	0.00%	1	1	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G300111	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G300111	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.166645 x 10^-1	23	6	17	9	79.31%	34.62%	29	26	RefGen V2	χ2 p-value for B73 x Mo17: '.001595' χ2 p-value for Mo17 x B73: '.1166645' Biased in favor of strain: ''
GRMZM2G181637	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	2	3	3	33.33%	50.00%	3	6	RefGen V2	χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G181637	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	1		100.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G181607	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.300204 x 10^-1	143	169	103	246	45.83%	70.49%	312	349	RefGen V2	χ2 p-value for B73 x Mo17: '5.89e-15' χ2 p-value for Mo17 x B73: '.1300204' Biased in favor of strain: ''
GRMZM2G181607	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.322747 x 10^-1	109	137	117	136	44.31%	53.75%	246	253	RefGen V2	χ2 p-value for B73 x Mo17: '.0742265' χ2 p-value for Mo17 x B73: '.2322747' Biased in favor of strain: ''
GRMZM2G181605	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.14437 x 10^-2	33	16	44	26	67.35%	37.14%	49	70	RefGen V2	χ2 p-value for B73 x Mo17: '.0151584' χ2 p-value for Mo17 x B73: '.0314437' Biased in favor of strain: 'B73'
GRMZM2G181605	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.95 x 10^-12	98	1	81	7	98.99%	7.95%	99	88	RefGen V2	χ2 p-value for B73 x Mo17: '8.95e-12' χ2 p-value for Mo17 x B73: '1.55e-31' Biased in favor of strain: 'B73'
GRMZM2G181568	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.52338 x 10^-2	81	23	50	54	77.88%	51.92%	104	104	RefGen V2	χ2 p-value for B73 x Mo17: '.0152338' χ2 p-value for Mo17 x B73: '.0014251' Biased in favor of strain: ''
GRMZM2G181568	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.62 x 10^-13	85	14	94	17	85.86%	15.32%	99	111	RefGen V2	χ2 p-value for B73 x Mo17: '9.62e-13' χ2 p-value for Mo17 x B73: '2.70e-13' Biased in favor of strain: 'B73'
GRMZM2G181566	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.285 x 10^-4	89	139	38	97	39.04%	71.85%	228	135	RefGen V2	χ2 p-value for B73 x Mo17: '.0009285' χ2 p-value for Mo17 x B73: '3.82e-07' Biased in favor of strain: 'Mo17'
GRMZM2G181566	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.745079 x 10^-1	379	148	163	293	71.92%	64.25%	527	456	RefGen V2	χ2 p-value for B73 x Mo17: '.010574' χ2 p-value for Mo17 x B73: '.2745079' Biased in favor of strain: ''
GRMZM2G181551	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1923	284	1169	583	87.13%	33.28%	2207	1752	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G181551	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	3407	1127	2297	728	75.14%	24.07%	4534	3025	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G181542	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	2	7	5	71.43%	41.67%	7	12	RefGen V2	χ2 p-value for B73 x Mo17: '.789277' χ2 p-value for Mo17 x B73: '.0661925' Biased in favor of strain: ''
GRMZM2G181542	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	9	6	5	5	60.00%	50.00%	15	10	RefGen V2	χ2 p-value for B73 x Mo17: '.438578' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G181540	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	12	12	11	14	50.00%	56.00%	24	25	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.5485063' Biased in favor of strain: ''
GRMZM2G181540	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.658458 x 10^-1	69	25	55	26	73.40%	32.10%	94	81	RefGen V2	χ2 p-value for B73 x Mo17: '.1658458' χ2 p-value for Mo17 x B73: '4.12e-11' Biased in favor of strain: ''
GRMZM2G181522	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.739433 x 10^-1	81	91	81	74	47.09%	47.74%	172	155	RefGen V2	χ2 p-value for B73 x Mo17: '.4457659' χ2 p-value for Mo17 x B73: '.5739433' Biased in favor of strain: ''
GRMZM2G181522	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.567179 x 10^-1	85	39	44	71	68.55%	61.74%	124	115	RefGen V2	χ2 p-value for B73 x Mo17: '.6567179' χ2 p-value for Mo17 x B73: '.2623103' Biased in favor of strain: ''
GRMZM2G181519	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		9	2	6	0	81.82%	0.00%	11	6	RefGen V2	χ2 p-value for B73 x Mo17: '.2864275' χ2 p-value for Mo17 x B73: '.000532' Biased in favor of strain: ''
GRMZM2G181519	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.84221 x 10^-2	14	3	14	4	82.35%	22.22%	17	18	RefGen V2	χ2 p-value for B73 x Mo17: '.0076329' χ2 p-value for Mo17 x B73: '.0184221' Biased in favor of strain: 'B73'
GRMZM2G181505	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.01084 x 10^-2	813	616	624	703	56.89%	52.98%	1429	1327	RefGen V2	χ2 p-value for B73 x Mo17: '1.87e-07' χ2 p-value for Mo17 x B73: '.0301084' Biased in favor of strain: ''
GRMZM2G181505	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.37 x 10^-12	1768	646	850	979	73.24%	53.53%	2414	1829	RefGen V2	χ2 p-value for B73 x Mo17: '7.37e-12' χ2 p-value for Mo17 x B73: '9.20e-33' Biased in favor of strain: 'B73'
GRMZM2G181484	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.7 x 10^-7	912	528	711	527	63.33%	42.57%	1440	1238	RefGen V2	χ2 p-value for B73 x Mo17: '4.54e-24' χ2 p-value for Mo17 x B73: '1.70e-07' Biased in favor of strain: 'B73'
GRMZM2G181484	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	maternally biased	5.85 x 10^-7	180	24	43	195	88.24%	81.93%	204	238	RefGen V2	χ2 p-value for B73 x Mo17: '6.36e-11' χ2 p-value for Mo17 x B73: '5.85e-07' Biased in favor of strain: ''
GRMZM2G181456	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	8	0	6	0.00%	100.00%	8	6	RefGen V2	χ2 p-value for B73 x Mo17: '.0000633' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G181456	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G181415	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	7	4	100.00%	36.36%	2	11	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.3657123' Biased in favor of strain: ''
GRMZM2G181415	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	1	2	4	85.71%	66.67%	7	6	RefGen V2	χ2 p-value for B73 x Mo17: '.2850535' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: ''
GRMZM2G181390	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.79312 x 10^-2	64	92	55	38	41.03%	40.86%	156	93	RefGen V2	χ2 p-value for B73 x Mo17: '.0249747' χ2 p-value for Mo17 x B73: '.0779312' Biased in favor of strain: ''
GRMZM2G181390	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.553297 x 10^-1	14	9	9	23	60.87%	71.88%	23	32	RefGen V2	χ2 p-value for B73 x Mo17: '.5553297' χ2 p-value for Mo17 x B73: '.5319712' Biased in favor of strain: ''
GRMZM2G181378	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.731559 x 10^-1	398	223	170	616	64.09%	78.37%	621	786	RefGen V2	χ2 p-value for B73 x Mo17: '.1731559' χ2 p-value for Mo17 x B73: '3.37e-12' Biased in favor of strain: ''
GRMZM2G181378	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.08318 x 10^-2	260	208	230	269	55.56%	53.91%	468	499	RefGen V2	χ2 p-value for B73 x Mo17: '.01623' χ2 p-value for Mo17 x B73: '.0808318' Biased in favor of strain: ''
GRMZM2G181269	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.22058 x 10^-2	22	4	9	3	84.62%	25.00%	26	12	RefGen V2	χ2 p-value for B73 x Mo17: '.0522058' χ2 p-value for Mo17 x B73: '.0021996' Biased in favor of strain: ''
GRMZM2G181269	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.57899 x 10^-1	21	29	18	34	42.00%	65.38%	50	52	RefGen V2	χ2 p-value for B73 x Mo17: '.257899' χ2 p-value for Mo17 x B73: '.0265003' Biased in favor of strain: ''

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