Displaying data sets 9501 - 9600 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G53480 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.81914 x 10-1 136 197 49 68 40.84% 58.12% 333 117 TAIR8 Avg. embryo expression (dissected): '752.746'
Avg. embryo expression (LCM): '430.709'
AT5G53480 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.51967 x 10-1 221 62 78.09% 283 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53480 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.41701 x 10-1 2281 738 75.55% 3019 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53480 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.3 x 10-17 1917 360 84.19% 2277 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53470 ACBP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 54 27 18 39 66.67% 68.42% 81 57 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.158416'
Avg. expression score for this sample: '149.832'
Avg. expression score in LCM sample: '111.013'
Tissue used: 'pure endosperm, no chalazal'
AT5G53470 ACBP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.5148 x 10-2 66 12 39 86 84.62% 68.80% 78 125 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.158416'
Avg. expression score for this sample: '236.844'
Avg. expression score in LCM sample: '111.013'
Tissue used: 'full endosperm'
AT5G53470 ACBP1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.34073 x 10-1 61 53 21 21 53.51% 50.00% 114 42 TAIR8 Avg. embryo expression (dissected): '264.862'
Avg. embryo expression (LCM): '220.704'
AT5G53470 ACBP1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.65755 x 10-1 12 2 85.71% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53470 ACBP1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.15132 x 10-1 188 57 76.73% 245 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53470 ACBP1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1 x 10-10 190 13 93.60% 203 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53460 GLT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.80426 x 10-1 93 50 33 95 65.03% 74.22% 143 128 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.6e-08'
Avg. expression score for this sample: '415.119'
Avg. expression score in LCM sample: '314.036'
Tissue used: 'pure endosperm, no chalazal'
AT5G53460 GLT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.3 x 10-10 238 62 54 288 79.33% 84.21% 300 342 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.6e-08'
Avg. expression score for this sample: '693.951'
Avg. expression score in LCM sample: '314.036'
Tissue used: 'full endosperm'
AT5G53460 GLT1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.22186 x 10-1 121 164 36 55 42.46% 60.44% 285 91 TAIR8 Avg. embryo expression (dissected): '791.814'
Avg. embryo expression (LCM): '528.804'
AT5G53460 GLT1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.6735 x 10-2 107 15 87.70% 122 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53460 GLT1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.7 x 10-7 413 49 89.39% 462 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53460 GLT1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2 x 10-9 597 69 89.64% 666 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53451 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G53451 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G53451 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G53451 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53451 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53451 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53450 ORG1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 2 1 2 33.33% 66.67% 3 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.449482'
Avg. expression score for this sample: '48.9387'
Avg. expression score in LCM sample: '32.8792'
Tissue used: 'pure endosperm, no chalazal'
AT5G53450 ORG1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.1927 x 10-1 0 1 4 3 0.00% 42.86% 1 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.449482'
Avg. expression score for this sample: '66.5288'
Avg. expression score in LCM sample: '32.8792'
Tissue used: 'full endosperm'
AT5G53450 ORG1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 1 1 0 0.00% 0.00% 1 1 TAIR8 Avg. embryo expression (dissected): '43.2796'
Avg. embryo expression (LCM): '33.9333'
AT5G53450 ORG1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53450 ORG1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53450 ORG1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.4548 x 10-2 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.01716 x 10-1 148 69 89 201 68.20% 69.31% 217 290 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000114'
Avg. expression score for this sample: '1835.02'
Avg. expression score in LCM sample: '290.548'
Tissue used: 'pure endosperm, no chalazal'
AT5G53440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.8 x 10-5 455 159 223 612 74.10% 73.29% 614 835 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000114'
Avg. expression score for this sample: '1553.3'
Avg. expression score in LCM sample: '290.548'
Tissue used: 'full endosperm'
AT5G53440 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.83076 x 10-1 152 165 57 57 47.95% 50.00% 317 114 TAIR8 Avg. embryo expression (dissected): '2142.56'
Avg. embryo expression (LCM): '750.815'
AT5G53440 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.7679 x 10-2 62 14 81.58% 76 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53440 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.55119 x 10-1 621 241 72.04% 862 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53440 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.4 x 10-15 914 167 84.55% 1081 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53430 SDG29 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.52383 x 10-1 15 14 8 18 51.72% 69.23% 29 26 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.53468'
Avg. expression score for this sample: '36.686'
Avg. expression score in LCM sample: '22.1498'
Tissue used: 'pure endosperm, no chalazal'
AT5G53430 SDG29 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.72214 x 10-1 47 20 23 70 70.15% 75.27% 67 93 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.53468'
Avg. expression score for this sample: '80.0668'
Avg. expression score in LCM sample: '22.1498'
Tissue used: 'full endosperm'
AT5G53430 SDG29 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.99502 x 10-1 41 49 15 18 45.56% 54.55% 90 33 TAIR8 Avg. embryo expression (dissected): '103.394'
Avg. embryo expression (LCM): '72.5132'
AT5G53430 SDG29 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.0441 x 10-1 9 6 60.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53430 SDG29 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.711 x 10-2 67 14 82.72% 81 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53430 SDG29 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.95116 x 10-1 67 30 69.07% 97 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.87837 x 10-1 42 16 23 31 72.41% 57.41% 58 54 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.875368'
Avg. expression score for this sample: '64.8917'
Avg. expression score in LCM sample: '18.1813'
Tissue used: 'pure endosperm, no chalazal'
AT5G53420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 97 42 43 70 69.78% 61.95% 139 113 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.875368'
Avg. expression score for this sample: '155.185'
Avg. expression score in LCM sample: '18.1813'
Tissue used: 'full endosperm'
AT5G53420 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 18 19 5 5 48.65% 50.00% 37 10 TAIR8 Avg. embryo expression (dissected): '49.483'
Avg. embryo expression (LCM): '68.3312'
AT5G53420 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.95648 x 10-1 14 3 82.35% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53420 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.5412 x 10-2 23 5 82.14% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53420 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2 x 10-5 82 11 88.17% 93 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G53410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G53410 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G53410 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53410 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53410 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53400 BOB1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.55121 x 10-1 159 71 96 205 69.13% 68.11% 230 301 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.029342'
Avg. expression score for this sample: '355.009'
Avg. expression score in LCM sample: '85.2773'
Tissue used: 'pure endosperm, no chalazal'
AT5G53400 BOB1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.3565 x 10-2 171 59 74 206 74.35% 73.57% 230 280 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.029342'
Avg. expression score for this sample: '331.782'
Avg. expression score in LCM sample: '85.2773'
Tissue used: 'full endosperm'
AT5G53400 BOB1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.97944 x 10-1 114 98 62 57 53.77% 47.90% 212 119 TAIR8 Avg. embryo expression (dissected): '352.549'
Avg. embryo expression (LCM): '203.411'
AT5G53400 BOB1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.00674 x 10-1 61 18 77.22% 79 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53400 BOB1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.973 x 10-3 93 18 83.78% 111 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53400 BOB1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.5 x 10-11 222 24 90.24% 246 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53390 FOP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.59661'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G53390 FOP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.411305'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G53390 FOP1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '8.06529'
Avg. embryo expression (LCM): '19.6416'
AT5G53390 FOP1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53390 FOP1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53390 FOP1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G53380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.25042'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G53380 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G53380 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53380 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53380 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53370 PMEPCRF endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 2 100.00% 100.00% 2 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '8.9e-06'
Avg. expression score for this sample: '64.8282'
Avg. expression score in LCM sample: '11.9053'
Tissue used: 'pure endosperm, no chalazal'
AT5G53370 PMEPCRF endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.1 x 10-6 29 3 5 61 90.62% 92.42% 32 66 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '8.9e-06'
Avg. expression score for this sample: '225.276'
Avg. expression score in LCM sample: '11.9053'
Tissue used: 'full endosperm'
AT5G53370 PMEPCRF embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '9.24875'
Avg. embryo expression (LCM): '0'
AT5G53370 PMEPCRF endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 10 0 100.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53370 PMEPCRF endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.11168 x 10-1 36 0 100.00% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53370 PMEPCRF endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.1509 x 10-2 73 0 100.00% 73 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '33.7855'
Avg. expression score in LCM sample: '22.4143'
Tissue used: 'pure endosperm, no chalazal'
AT5G53360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '36.544'
Avg. expression score in LCM sample: '22.4143'
Tissue used: 'full endosperm'
AT5G53360 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '9.71482'
Avg. embryo expression (LCM): '16.4141'
AT5G53360 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53360 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53360 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53350 CLPX endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '578.876'
Avg. expression score in LCM sample: '172.215'
Tissue used: 'pure endosperm, no chalazal'
AT5G53350 CLPX endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '559.651'
Avg. expression score in LCM sample: '172.215'
Tissue used: 'full endosperm'
AT5G53350 CLPX embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '358.143'
Avg. embryo expression (LCM): '171.776'
AT5G53350 CLPX endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53350 CLPX endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53350 CLPX endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.5103 x 10-2 22 2 2 10 91.67% 83.33% 24 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.005708'
Avg. expression score for this sample: '33.4123'
Avg. expression score in LCM sample: '21.944'
Tissue used: 'pure endosperm, no chalazal'
AT5G53340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.6479 x 10-2 31 8 10 37 79.49% 78.72% 39 47 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.005708'
Avg. expression score for this sample: '62.5693'
Avg. expression score in LCM sample: '21.944'
Tissue used: 'full endosperm'
AT5G53340 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.81251 x 10-1 10 11 4 1 47.62% 20.00% 21 5 TAIR8 Avg. embryo expression (dissected): '37.6796'
Avg. embryo expression (LCM): '30.4545'
AT5G53340 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.7375 x 10-2 12 8 60.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53340 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.47632 x 10-1 55 13 80.88% 68 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53340 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.3 x 10-5 96 1 98.97% 97 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '35.4115'
Avg. expression score in LCM sample: '33.2908'
Tissue used: 'pure endosperm, no chalazal'
AT5G53330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '57.4198'
Avg. expression score in LCM sample: '33.2908'
Tissue used: 'full endosperm'
AT5G53330 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '21.6742'
Avg. embryo expression (LCM): '32.5142'
AT5G53330 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53330 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G53330 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'