| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT3G05090 | LRS1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.33968 x 10-1 | 19 | 6 | 18 | 49 | 76.00% | 73.13% | 25 | 67 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.092779' Avg. expression score for this sample: '86.1248' Avg. expression score in LCM sample: '44.8727' Tissue used: 'full endosperm' |
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| AT3G05090 | LRS1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.19344 x 10-1 | 79 | 17 | 82.29% | 96 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G05090 | LRS1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.02932 x 10-1 | 7 | 3 | 70.00% | 10 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G05090 | LRS1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.70713 x 10-1 | 11 | 6 | 2 | 8 | 64.71% | 80.00% | 17 | 10 | TAIR8 |
Avg. embryo expression (dissected): '43.8675' Avg. embryo expression (LCM): '51.126' |
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| AT3G05080 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '33.09' Avg. embryo expression (LCM): '70.7048' |
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| AT3G05080 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '183.575' Avg. expression score in LCM sample: '23.6489' Tissue used: 'full endosperm' |
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| AT3G05080 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 1.0 | 1 | 1 | 0 | 0 | 50.00% | 2 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '45.6999' Avg. expression score in LCM sample: '23.6489' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT3G05080 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G05080 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G05080 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G05070 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.87861 x 10-1 | 37 | 18 | 67.27% | 55 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G05070 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.26458 x 10-1 | 53 | 10 | 84.13% | 63 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G05070 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.8316 x 10-2 | 28 | 3 | 15 | 39 | 90.32% | 72.22% | 31 | 54 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.095216' Avg. expression score for this sample: '165.137' Avg. expression score in LCM sample: '62.5396' Tissue used: 'full endosperm' |
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| AT3G05070 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.35902 x 10-1 | 13 | 4 | 4 | 0 | 76.47% | 0.00% | 17 | 4 | TAIR8 |
Avg. embryo expression (dissected): '176.947' Avg. embryo expression (LCM): '176.046' |
||||
| AT3G05070 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.9855 x 10-1 | 9 | 6 | 60.00% | 15 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G05070 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 8 | 2 | 4 | 7 | 80.00% | 63.64% | 10 | 11 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.095216' Avg. expression score for this sample: '158.677' Avg. expression score in LCM sample: '62.5396' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G05060 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.28647 x 10-1 | 30 | 13 | 14 | 16 | 69.77% | 53.33% | 43 | 30 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.6318' Avg. expression score for this sample: '91.8729' Avg. expression score in LCM sample: '22.7083' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT3G05060 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.18184 x 10-1 | 45 | 15 | 44 | 64 | 75.00% | 59.26% | 60 | 108 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.6318' Avg. expression score for this sample: '171.145' Avg. expression score in LCM sample: '22.7083' Tissue used: 'full endosperm' |
|||||
| AT3G05060 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.4 x 10-5 | 389 | 104 | 78.90% | 493 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G05060 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.1791 x 10-2 | 16 | 22 | 42.11% | 38 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G05060 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.44133 x 10-1 | 81 | 91 | 31 | 20 | 47.09% | 39.22% | 172 | 51 | TAIR8 |
Avg. embryo expression (dissected): '290.889' Avg. embryo expression (LCM): '590.077' |
||||
| AT3G05060 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.66899 x 10-1 | 225 | 135 | 62.50% | 360 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G05050 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.0 x 10-30 | 1124 | 145 | 88.57% | 1269 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G05050 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.46483 x 10-1 | 446 | 466 | 190 | 151 | 48.90% | 44.28% | 912 | 341 | TAIR8 |
Avg. embryo expression (dissected): '550.594' Avg. embryo expression (LCM): '303.817' |
||||
| AT3G05050 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.4 x 10-21 | 897 | 237 | 355 | 1208 | 79.10% | 77.29% | 1134 | 1563 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '7.9e-15' Avg. expression score for this sample: '657.802' Avg. expression score in LCM sample: '217.367' Tissue used: 'full endosperm' |
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| AT3G05050 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.59897 x 10-1 | 615 | 285 | 255 | 542 | 68.33% | 68.01% | 900 | 797 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '7.9e-15' Avg. expression score for this sample: '464.504' Avg. expression score in LCM sample: '217.367' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT3G05050 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.9447 x 10-2 | 180 | 45 | 80.00% | 225 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G05050 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 2069 | 110 | 94.95% | 2179 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G05040 | HST | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 42 | 17 | 71.19% | 59 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G05040 | HST | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 9.09226 x 10-1 | 56 | 38 | 18 | 63 | 59.57% | 77.78% | 94 | 81 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.274696' Avg. expression score for this sample: '65.7414' Avg. expression score in LCM sample: '24.134' Tissue used: 'full endosperm' |
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| AT3G05040 | HST | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.6784 x 10-2 | 24 | 62 | 22 | 28 | 27.91% | 56.00% | 86 | 50 | TAIR8 |
Avg. embryo expression (dissected): '48.6045' Avg. embryo expression (LCM): '45.7635' |
|||
| AT3G05040 | HST | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 8.1637 x 10-1 | 18 | 6 | 75.00% | 24 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G05040 | HST | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.29602 x 10-1 | 31 | 13 | 12 | 51 | 70.45% | 80.95% | 44 | 63 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.274696' Avg. expression score for this sample: '25.2936' Avg. expression score in LCM sample: '24.134' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G05040 | HST | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.664 x 10-3 | 45 | 5 | 90.00% | 50 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G05030 | NHX2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.7388 x 10-2 | 58 | 8 | 87.88% | 66 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G05030 | NHX2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 7 | 2 | 6 | 13 | 77.78% | 68.42% | 9 | 19 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.282247' Avg. expression score for this sample: '366.411' Avg. expression score in LCM sample: '228.082' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G05030 | NHX2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.88613 x 10-1 | 33 | 14 | 13 | 44 | 70.21% | 77.19% | 47 | 57 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.282247' Avg. expression score for this sample: '264.459' Avg. expression score in LCM sample: '228.082' Tissue used: 'full endosperm' |
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| AT3G05030 | NHX2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.9 x 10-6 | 49 | 0 | 100.00% | 49 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G05030 | NHX2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.48122 x 10-1 | 9 | 4 | 69.23% | 13 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G05030 | NHX2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 0 | 3 | 0 | 1 | 0.00% | 100.00% | 3 | 1 | TAIR8 |
Avg. embryo expression (dissected): '90.72' Avg. embryo expression (LCM): '52.0679' |
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| AT3G05020 | ACP1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.97613 x 10-1 | 78 | 52 | 13 | 7 | 60.00% | 35.00% | 130 | 20 | TAIR8 |
Avg. embryo expression (dissected): '8255.41' Avg. embryo expression (LCM): '6760.96' |
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| AT3G05020 | ACP1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 312 | 74 | 231 | 296 | 80.83% | 56.17% | 386 | 527 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '3458.99' Avg. expression score in LCM sample: '1346.8' Tissue used: 'full endosperm' |
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| AT3G05020 | ACP1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 56 | 17 | 26 | 30 | 76.71% | 53.57% | 73 | 56 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '7681.37' Avg. expression score in LCM sample: '1346.8' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G05020 | ACP1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.38888 x 10-1 | 30 | 23 | 56.60% | 53 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G05020 | ACP1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.114 x 10-3 | 56 | 12 | 82.35% | 68 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G05020 | ACP1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 8.88241 x 10-1 | 40 | 19 | 67.80% | 59 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G05010 | Cand2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.43474 x 10-1 | 14 | 4 | 77.78% | 18 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G05010 | Cand2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.8327 | 44 | 11 | 80.00% | 55 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G05010 | Cand2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.956 x 10-3 | 41 | 9 | 6 | 37 | 82.00% | 86.05% | 50 | 43 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.009591' Avg. expression score for this sample: '87.8172' Avg. expression score in LCM sample: '44.1819' Tissue used: 'full endosperm' |
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| AT3G05010 | Cand2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.31857 x 10-1 | 9 | 5 | 2 | 1 | 64.29% | 33.33% | 14 | 3 | TAIR8 |
Avg. embryo expression (dissected): '58.9768' Avg. embryo expression (LCM): '45.7007' |
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| AT3G05010 | Cand2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.99936 x 10-1 | 7 | 0 | 100.00% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G05010 | Cand2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 7 | 1 | 4 | 7 | 87.50% | 63.64% | 8 | 11 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.009591' Avg. expression score for this sample: '55.7981' Avg. expression score in LCM sample: '44.1819' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G05000 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 0 | 0 | 1 | 100.00% | 100.00% | 1 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '146.013' Avg. expression score in LCM sample: '213.693' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G05000 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 2 | 2 | 1 | 3 | 50.00% | 75.00% | 4 | 4 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '75.5027' Avg. expression score in LCM sample: '213.693' Tissue used: 'full endosperm' |
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| AT3G05000 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.10526 x 10-1 | 9 | 0 | 100.00% | 9 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G05000 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G05000 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 1 | 0 | 0 | 50.00% | 2 | 0 | TAIR8 |
Avg. embryo expression (dissected): '138.819' Avg. embryo expression (LCM): '164.781' |
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| AT3G05000 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 4 | 1 | 80.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G04997 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G04997 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
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| AT3G04997 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '1.38113' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT3G04997 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G04997 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G04997 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G04990 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G04990 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '13.4943' Avg. expression score in LCM sample: '2.1459' Tissue used: 'full endosperm' |
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| AT3G04990 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.850136' Avg. embryo expression (LCM): '0' |
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| AT3G04990 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G04990 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '13.671' Avg. expression score in LCM sample: '2.1459' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G04990 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G04980 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G04980 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '362.938' Avg. expression score in LCM sample: '129.459' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G04980 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '419.108' Avg. expression score in LCM sample: '129.459' Tissue used: 'full endosperm' |
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| AT3G04980 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G04980 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G04980 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '428.505' Avg. embryo expression (LCM): '321.776' |
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| AT3G04970 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '24.3548' Avg. embryo expression (LCM): '34.737' |
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| AT3G04970 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '19.4826' Avg. expression score in LCM sample: '5.21776' Tissue used: 'full endosperm' |
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| AT3G04970 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '20.1606' Avg. expression score in LCM sample: '5.21776' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G04970 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G04970 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G04970 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G04960 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G04960 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G04960 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '19.2282' Avg. expression score in LCM sample: '.720198' Tissue used: 'full endosperm' |
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| AT3G04960 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '2.23437' Avg. embryo expression (LCM): '0' |
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| AT3G04960 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G04960 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '6.95665' Avg. expression score in LCM sample: '.720198' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G04950 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '15.5002' Avg. expression score in LCM sample: '6.18782' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G04950 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '15.816' Avg. expression score in LCM sample: '6.18782' Tissue used: 'full endosperm' |
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| AT3G04950 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G04950 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G04950 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '35.0013' Avg. embryo expression (LCM): '35.7292' |
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| AT3G04950 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G04945 | LCR18 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.48371 x 10-1 | 7 | 2 | 77.78% | 9 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G04945 | LCR18 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '7.7694' Avg. embryo expression (LCM): '0' |
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| AT3G04945 | LCR18 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 9.3783 x 10-2 | 5 | 0 | 10 | 1 | 100.00% | 9.09% | 5 | 11 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.288877' Avg. expression score for this sample: '63.2866' Avg. expression score in LCM sample: '96.2713' Tissue used: 'full endosperm' |
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| AT3G04945 | LCR18 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 8 | 3 | 2 | 0 | 72.73% | 0.00% | 11 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.288877' Avg. expression score for this sample: '116.95' Avg. expression score in LCM sample: '96.2713' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G04945 | LCR18 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G04945 | LCR18 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' |