Displaying data sets 95501 - 95600 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G05220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.36 x 10-4 2912 530 1404 1558 84.60% 52.60% 3442 2962 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.013768'
Avg. expression score for this sample: '2378.81'
Avg. expression score in LCM sample: '680.469'
Tissue used: 'full endosperm'
AT3G05220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.0 x 10-16 1764 505 1392 907 77.74% 39.45% 2269 2299 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.013768'
Avg. expression score for this sample: '3214.3'
Avg. expression score in LCM sample: '680.469'
Tissue used: 'pure endosperm, no chalazal'
AT3G05210 ERCC1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.91787 x 10-1 28 4 13 14 87.50% 51.85% 32 27 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.011801'
Avg. expression score for this sample: '39.7392'
Avg. expression score in LCM sample: '7.86338'
Tissue used: 'pure endosperm, no chalazal'
AT3G05210 ERCC1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 11 10 4 4 52.38% 50.00% 21 8 TAIR8 Avg. embryo expression (dissected): '31.1454'
Avg. embryo expression (LCM): '32.7402'
AT3G05210 ERCC1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.983 x 10-3 47 3 9 29 94.00% 76.32% 50 38 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.011801'
Avg. expression score for this sample: '51.5118'
Avg. expression score in LCM sample: '7.86338'
Tissue used: 'full endosperm'
AT3G05210 ERCC1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.1269 x 10-2 48 4 92.31% 52 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05210 ERCC1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.0853 x 10-2 15 11 57.69% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05210 ERCC1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.36282 x 10-1 70 9 88.61% 79 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05200 ATL6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05200 ATL6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.5509 x 10-2 7 5 58.33% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05200 ATL6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.123 x 10-2 8 1 1 14 88.89% 93.33% 9 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.092779'
Avg. expression score for this sample: '22.223'
Avg. expression score in LCM sample: '5.87917'
Tissue used: 'full endosperm'
AT3G05200 ATL6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 0 3 5 100.00% 62.50% 3 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.092779'
Avg. expression score for this sample: '21.8716'
Avg. expression score in LCM sample: '5.87917'
Tissue used: 'pure endosperm, no chalazal'
AT3G05200 ATL6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.70713 x 10-1 14 6 2 5 70.00% 71.43% 20 7 TAIR8 Avg. embryo expression (dissected): '41.0539'
Avg. embryo expression (LCM): '32.3258'
AT3G05200 ATL6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.64844 x 10-1 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05193 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05193 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05193 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05193 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G05193 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G05193 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G05190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 6 2 2 4 75.00% 66.67% 8 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '43.2108'
Avg. expression score in LCM sample: '23.4873'
Tissue used: 'pure endosperm, no chalazal'
AT3G05190 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 4 0 1 20.00% 100.00% 5 1 TAIR8 Avg. embryo expression (dissected): '40.0386'
Avg. embryo expression (LCM): '42.5108'
AT3G05190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 12 1 11 11 92.31% 50.00% 13 22 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '33.1066'
Avg. expression score in LCM sample: '23.4873'
Tissue used: 'full endosperm'
AT3G05190 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05190 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.0268 x 10-2 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05190 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05180 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.65306 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05180 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.9038 x 10-2 18 1 94.74% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.07986 x 10-1 11 6 13 37 64.71% 74.00% 17 50 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.344356'
Avg. expression score for this sample: '44.7883'
Avg. expression score in LCM sample: '171.01'
Tissue used: 'full endosperm'
AT3G05180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.81654 x 10-1 13 2 4 11 86.67% 73.33% 15 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.344356'
Avg. expression score for this sample: '82.0581'
Avg. expression score in LCM sample: '171.01'
Tissue used: 'pure endosperm, no chalazal'
AT3G05180 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.49917 x 10-1 7 1 2 0 87.50% 0.00% 8 2 TAIR8 Avg. embryo expression (dissected): '32.507'
Avg. embryo expression (LCM): '19.4156'
AT3G05180 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.11466 x 10-1 9 0 100.00% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05170 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.87105 x 10-1 100 22 81.97% 122 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05170 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.594 x 10-3 116 7 94.31% 123 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05170 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.14976 x 10-1 32 5 86.49% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05170 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.77512 x 10-1 12 6 5 2 66.67% 28.57% 18 7 TAIR8 Avg. embryo expression (dissected): '33.387'
Avg. embryo expression (LCM): '20.37'
AT3G05170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.9 x 10-7 78 22 10 127 78.00% 92.70% 100 137 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00001'
Avg. expression score for this sample: '100.838'
Avg. expression score in LCM sample: '20.4301'
Tissue used: 'full endosperm'
AT3G05170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 18 3 15 18 85.71% 54.55% 21 33 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00001'
Avg. expression score for this sample: '40.1398'
Avg. expression score in LCM sample: '20.4301'
Tissue used: 'pure endosperm, no chalazal'
AT3G05165 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '19.8806'
Avg. expression score in LCM sample: '2.76321'
Tissue used: 'pure endosperm, no chalazal'
AT3G05165 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '21.8954'
Avg. embryo expression (LCM): '1.56982'
AT3G05165 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 1 3 75.00% 0 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '96.9317'
Avg. expression score in LCM sample: '2.76321'
Tissue used: 'full endosperm'
AT3G05165 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05165 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05165 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05160 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0648 x 10-1 15 8 65.22% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05160 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.22438 x 10-1 28 9 75.68% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.7 x 10-7 92 48 43 304 65.71% 87.61% 140 347 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.7e-07'
Avg. expression score for this sample: '117.47'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G05160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 16 10 1 6 61.54% 85.71% 26 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.7e-07'
Avg. expression score for this sample: '12.0257'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G05160 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.05663 x 10-1 68 104 15 24 39.53% 61.54% 172 39 TAIR8 Avg. embryo expression (dissected): '125.012'
Avg. embryo expression (LCM): '9.0045'
AT3G05160 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.08486 x 10-1 18 7 72.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05155 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05155 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05155 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05155 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '1.26798'
Avg. embryo expression (LCM): '0'
AT3G05155 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 2 0 0 33.33% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.284031'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G05155 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.204478'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G05152 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '23.4032'
Avg. expression score in LCM sample: '6.3789'
Tissue used: 'pure endosperm, no chalazal'
AT3G05152 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '163.785'
Avg. embryo expression (LCM): '117.963'
AT3G05152 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05152 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05152 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05152 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '14.502'
Avg. expression score in LCM sample: '6.3789'
Tissue used: 'full endosperm'
AT3G05150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.37428 x 10-1 6 6 2 5 50.00% 71.43% 12 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.530265'
Avg. expression score for this sample: '2.52303'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G05150 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05150 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.22826 x 10-1 0 3 0.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05150 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 8 11 1 3 42.11% 75.00% 19 4 TAIR8 Avg. embryo expression (dissected): '4.41971'
Avg. embryo expression (LCM): '.778632'
AT3G05150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 1 0 0.00% 0.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.530265'
Avg. expression score for this sample: '.160607'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G05150 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.24506 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05140 RBK2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05140 RBK2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05140 RBK2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05140 RBK2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.704138'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G05140 RBK2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.511797'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G05140 RBK2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.285188'
Avg. embryo expression (LCM): '0'
AT3G05130 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.00153 x 10-1 273 282 71 101 49.19% 58.72% 555 172 TAIR8 Avg. embryo expression (dissected): '2210.79'
Avg. embryo expression (LCM): '1540.8'
AT3G05130 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.76401 x 10-1 322 152 130 230 67.93% 63.89% 474 360 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.589031'
Avg. expression score for this sample: '1423.61'
Avg. expression score in LCM sample: '497.907'
Tissue used: 'pure endosperm, no chalazal'
AT3G05130 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.6 x 10-8 428 113 79.11% 541 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05130 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.47529 x 10-1 614 308 422 922 66.59% 68.60% 922 1344 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.589031'
Avg. expression score for this sample: '1918.51'
Avg. expression score in LCM sample: '497.907'
Tissue used: 'full endosperm'
AT3G05130 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.22828 x 10-1 31 8 79.49% 39 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05130 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.21 x 10-4 721 261 73.42% 982 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05120 GID1A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05120 GID1A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05120 GID1A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '139.947'
Avg. expression score in LCM sample: '29.6016'
Tissue used: 'full endosperm'
AT3G05120 GID1A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '41.88'
Avg. expression score in LCM sample: '29.6016'
Tissue used: 'pure endosperm, no chalazal'
AT3G05120 GID1A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '68.8442'
Avg. embryo expression (LCM): '62.1398'
AT3G05120 GID1A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05110 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05110 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.299782'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G05110 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05110 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05110 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.85607'
Avg. embryo expression (LCM): '0'
AT3G05110 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.459936'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G05100 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '24.5833'
Avg. expression score in LCM sample: '5.23246'
Tissue used: 'pure endosperm, no chalazal'
AT3G05100 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '56.8551'
Avg. embryo expression (LCM): '56.3503'
AT3G05100 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05100 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05100 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G05100 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '27.3557'
Avg. expression score in LCM sample: '5.23246'
Tissue used: 'full endosperm'
AT3G05090 LRS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.33968 x 10-1 19 6 18 49 76.00% 73.13% 25 67 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.092779'
Avg. expression score for this sample: '86.1248'
Avg. expression score in LCM sample: '44.8727'
Tissue used: 'full endosperm'
AT3G05090 LRS1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.02932 x 10-1 7 3 70.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'