Displaying data sets 94401 - 94500 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G06740 GATA15 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.46895 x 10-1 31 8 8 0 79.49% 0.00% 39 8 TAIR8 Avg. embryo expression (dissected): '102.502'
Avg. embryo expression (LCM): '68.9089'
AT3G06740 GATA15 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.68813 x 10-1 13 0 10 2 100.00% 16.67% 13 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.804933'
Avg. expression score for this sample: '17.5702'
Avg. expression score in LCM sample: '4.9385'
Tissue used: 'full endosperm'
AT3G06740 GATA15 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 6 1 3 0 85.71% 0.00% 7 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.804933'
Avg. expression score for this sample: '11.8368'
Avg. expression score in LCM sample: '4.9385'
Tissue used: 'pure endosperm, no chalazal'
AT3G06740 GATA15 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.16517 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06730 TRX z endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.6 x 10-4 2 11 15.38% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06730 TRX z endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.75976 x 10-1 39 1 9 1 97.50% 10.00% 40 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.566664'
Avg. expression score for this sample: '102.533'
Avg. expression score in LCM sample: '19.5041'
Tissue used: 'pure endosperm, no chalazal'
AT3G06730 TRX z endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.51898 x 10-1 34 0 23 6 100.00% 20.69% 34 29 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.566664'
Avg. expression score for this sample: '63.3432'
Avg. expression score in LCM sample: '19.5041'
Tissue used: 'full endosperm'
AT3G06730 TRX z endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.5955 x 10-2 1 3 25.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06730 TRX z endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.0 x 10-5 50 2 96.15% 52 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06730 TRX z embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.1 x 10-12 167 18 18 1 90.27% 5.26% 185 19 TAIR8 Avg. embryo expression (dissected): '506.007'
Avg. embryo expression (LCM): '615.421'
AT3G06720 IMPA-1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 5 2 4 0 71.43% 0.00% 7 4 TAIR8 Avg. embryo expression (dissected): '335.713'
Avg. embryo expression (LCM): '270.775'
AT3G06720 IMPA-1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.828 x 10-3 0 4 0.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06720 IMPA-1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.94157 x 10-1 23 2 5 9 92.00% 64.29% 25 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.097811'
Avg. expression score for this sample: '208.591'
Avg. expression score in LCM sample: '297.883'
Tissue used: 'full endosperm'
AT3G06720 IMPA-1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.3212 x 10-1 37 3 92.50% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06720 IMPA-1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.76471 x 10-1 6 0 1 2 100.00% 66.67% 6 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.097811'
Avg. expression score for this sample: '244.915'
Avg. expression score in LCM sample: '297.883'
Tissue used: 'pure endosperm, no chalazal'
AT3G06720 IMPA-1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.3 x 10-6 26 42 38.24% 68 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06710 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.71348'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G06710 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06710 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06710 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '4.65138'
Avg. embryo expression (LCM): '7.51003'
AT3G06710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.83974'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G06700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.02985 x 10-1 111 87 84 272 56.06% 76.40% 198 356 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.479009'
Avg. expression score for this sample: '1358.94'
Avg. expression score in LCM sample: '402.591'
Tissue used: 'full endosperm'
AT3G06700 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.5393 x 10-2 61 15 80.26% 76 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06700 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.51 x 10-3 156 38 80.41% 194 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06700 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.5251 x 10-2 47 97 9 14 32.64% 60.87% 144 23 TAIR8 Avg. embryo expression (dissected): '4685.83'
Avg. embryo expression (LCM): '4048.77'
AT3G06700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 21 22 13 46 48.84% 77.97% 43 59 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.479009'
Avg. expression score for this sample: '1826.67'
Avg. expression score in LCM sample: '402.591'
Tissue used: 'pure endosperm, no chalazal'
AT3G06700 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.6769 x 10-1 169 70 70.71% 239 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06690 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.04116 x 10-1 6 3 66.67% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.46935 x 10-1 3 2 4 0 60.00% 0.00% 5 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.560744'
Avg. expression score for this sample: '129.091'
Avg. expression score in LCM sample: '38.5085'
Tissue used: 'pure endosperm, no chalazal'
AT3G06690 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.72482 x 10-1 6 11 3 4 35.29% 57.14% 17 7 TAIR8 Avg. embryo expression (dissected): '286.685'
Avg. embryo expression (LCM): '117.912'
AT3G06690 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 9 4 1 2 69.23% 66.67% 13 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.560744'
Avg. expression score for this sample: '136.694'
Avg. expression score in LCM sample: '38.5085'
Tissue used: 'full endosperm'
AT3G06690 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.562 x 10-3 16 0 100.00% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06680 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.2706 x 10-2 27 5 84.38% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06680 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.70255 x 10-1 8 6 57.14% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06680 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 58 54 5 2 51.79% 28.57% 112 7 TAIR8 Avg. embryo expression (dissected): '577.289'
Avg. embryo expression (LCM): '670.427'
AT3G06680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.48944 x 10-1 22 4 13 27 84.62% 67.50% 26 40 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.686768'
Avg. expression score for this sample: '71.638'
Avg. expression score in LCM sample: '88.408'
Tissue used: 'full endosperm'
AT3G06680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.7011 x 10-1 20 15 11 8 57.14% 42.11% 35 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.686768'
Avg. expression score for this sample: '166.277'
Avg. expression score in LCM sample: '88.408'
Tissue used: 'pure endosperm, no chalazal'
AT3G06680 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.47767 x 10-1 15 16 48.39% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06670 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.35483 x 10-1 102 27 79.07% 129 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.38008 x 10-1 57 24 21 51 70.37% 70.83% 81 72 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.110484'
Avg. expression score for this sample: '89.2977'
Avg. expression score in LCM sample: '67.9779'
Tissue used: 'pure endosperm, no chalazal'
AT3G06670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.47499 x 10-1 82 39 30 103 67.77% 77.44% 121 133 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.110484'
Avg. expression score for this sample: '174.976'
Avg. expression score in LCM sample: '67.9779'
Tissue used: 'full endosperm'
AT3G06670 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.44387 x 10-1 24 10 70.59% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06670 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.035 x 10-3 88 15 85.44% 103 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06670 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.87684 x 10-1 36 39 7 20 48.00% 74.07% 75 27 TAIR8 Avg. embryo expression (dissected): '89.9947'
Avg. embryo expression (LCM): '109.712'
AT3G06665 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G06665 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06665 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G06665 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06665 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G06665 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06660 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.85327 x 10-1 47 25 65.28% 72 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.64718 x 10-1 35 21 19 30 62.50% 61.22% 56 49 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.498306'
Avg. expression score for this sample: '82.133'
Avg. expression score in LCM sample: '31.1155'
Tissue used: 'pure endosperm, no chalazal'
AT3G06660 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.1912 x 10-2 83 19 81.37% 102 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06660 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.066 x 10-3 23 1 95.83% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06660 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.24536 x 10-1 53 76 33 39 41.09% 54.17% 129 72 TAIR8 Avg. embryo expression (dissected): '243.966'
Avg. embryo expression (LCM): '140.819'
AT3G06660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.72548 x 10-1 83 27 31 75 75.45% 70.75% 110 106 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.498306'
Avg. expression score for this sample: '102.237'
Avg. expression score in LCM sample: '31.1155'
Tissue used: 'full endosperm'
AT3G06650 ACLB-1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.67193 x 10-1 20 7 7 17 74.07% 70.83% 27 24 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.423585'
Avg. expression score for this sample: '168.02'
Avg. expression score in LCM sample: '21.5177'
Tissue used: 'full endosperm'
AT3G06650 ACLB-1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.2026 x 10-2 17 0 100.00% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06650 ACLB-1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.085 x 10-3 55 3 94.83% 58 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06650 ACLB-1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.64076 x 10-1 8 18 3 5 30.77% 62.50% 26 8 TAIR8 Avg. embryo expression (dissected): '223.062'
Avg. embryo expression (LCM): '116.054'
AT3G06650 ACLB-1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.82043 x 10-1 8 0 1 1 100.00% 50.00% 8 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.423585'
Avg. expression score for this sample: '79.177'
Avg. expression score in LCM sample: '21.5177'
Tissue used: 'pure endosperm, no chalazal'
AT3G06650 ACLB-1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.1084 x 10-2 84 12 87.50% 96 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06640 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06640 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G06640 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06640 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.67847'
Avg. expression score in LCM sample: '.646708'
Tissue used: 'full endosperm'
AT3G06640 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06640 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.341275'
Avg. expression score in LCM sample: '.646708'
Tissue used: 'pure endosperm, no chalazal'
AT3G06630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '14.5056'
Avg. expression score in LCM sample: '16.7997'
Tissue used: 'pure endosperm, no chalazal'
AT3G06630 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06630 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06630 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06630 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '10.3953'
Avg. embryo expression (LCM): '13.7265'
AT3G06630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '11.1497'
Avg. expression score in LCM sample: '16.7997'
Tissue used: 'full endosperm'
AT3G06620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '60.5'
Avg. expression score in LCM sample: '16.4617'
Tissue used: 'full endosperm'
AT3G06620 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06620 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06620 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '30.8053'
Avg. embryo expression (LCM): '30.0904'
AT3G06620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '28.7676'
Avg. expression score in LCM sample: '16.4617'
Tissue used: 'pure endosperm, no chalazal'
AT3G06620 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06610 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.5787 x 10-1 31 26 54.39% 57 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06610 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.70916 x 10-1 12 8 2 3 60.00% 60.00% 20 5 TAIR8 Avg. embryo expression (dissected): '292.615'
Avg. embryo expression (LCM): '441.246'
AT3G06610 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.93395 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.20119 x 10-1 7 6 10 19 53.85% 65.52% 13 29 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.703631'
Avg. expression score for this sample: '121.27'
Avg. expression score in LCM sample: '99.3138'
Tissue used: 'full endosperm'
AT3G06610 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.3724 x 10-2 23 4 85.19% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 6 6 1 5 50.00% 83.33% 12 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.703631'
Avg. expression score for this sample: '150.257'
Avg. expression score in LCM sample: '99.3138'
Tissue used: 'pure endosperm, no chalazal'
AT3G06600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '7.76176'
Avg. expression score in LCM sample: '4.02723'
Tissue used: 'pure endosperm, no chalazal'
AT3G06600 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06600 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06600 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06600 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '6.2324'
Avg. embryo expression (LCM): '6.86954'
AT3G06600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.86574'
Avg. expression score in LCM sample: '4.02723'
Tissue used: 'full endosperm'
AT3G06590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.123 x 10-2 8 2 0 14 80.00% 100.00% 10 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.110619'
Avg. expression score for this sample: '14.0487'
Avg. expression score in LCM sample: '28.1759'
Tissue used: 'full endosperm'
AT3G06590 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06590 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.0734 x 10-2 86 3 96.63% 89 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G06590 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.31222 x 10-1 6 0 1 2 100.00% 66.67% 6 3 TAIR8 Avg. embryo expression (dissected): '7.1062'
Avg. embryo expression (LCM): '3.80525'
AT3G06590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 1 3 7 75.00% 70.00% 4 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.110619'
Avg. expression score for this sample: '10.6745'
Avg. expression score in LCM sample: '28.1759'
Tissue used: 'pure endosperm, no chalazal'
AT3G06590 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.3668 x 10-2 24 16 60.00% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'