Displaying data sets 94001 - 94100 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G07330 CSLC6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.931 x 10-3 219 44 88 181 83.27% 67.29% 263 269 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000857'
Avg. expression score for this sample: '83.711'
Avg. expression score in LCM sample: '63.98'
Tissue used: 'full endosperm'
AT3G07330 CSLC6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.9243 x 10-1 81 56 24 20 59.12% 45.45% 137 44 TAIR8 Avg. embryo expression (dissected): '68.742'
Avg. embryo expression (LCM): '53.2735'
AT3G07320 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.88585 x 10-1 174 185 42 44 48.47% 51.16% 359 86 TAIR8 Avg. embryo expression (dissected): '261.304'
Avg. embryo expression (LCM): '167.356'
AT3G07320 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.9776 x 10-2 59 53 52.68% 112 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07320 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.52 x 10-4 88 21 80.73% 109 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.7611 x 10-2 257 146 208 335 63.77% 61.69% 403 543 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.104323'
Avg. expression score for this sample: '199.915'
Avg. expression score in LCM sample: '143.687'
Tissue used: 'full endosperm'
AT3G07320 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.5 x 10-17 10 62 13.89% 72 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.07097 x 10-1 243 102 103 152 70.43% 59.61% 345 255 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.104323'
Avg. expression score for this sample: '226.487'
Avg. expression score in LCM sample: '143.687'
Tissue used: 'pure endosperm, no chalazal'
AT3G07310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '76.6796'
Avg. expression score in LCM sample: '29.0284'
Tissue used: 'pure endosperm, no chalazal'
AT3G07310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '123.761'
Avg. expression score in LCM sample: '29.0284'
Tissue used: 'full endosperm'
AT3G07310 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07310 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '93.9404'
Avg. embryo expression (LCM): '33.3681'
AT3G07310 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07310 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07300 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '60.192'
Avg. expression score in LCM sample: '19.1661'
Tissue used: 'pure endosperm, no chalazal'
AT3G07300 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07300 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '66.0578'
Avg. expression score in LCM sample: '19.1661'
Tissue used: 'full endosperm'
AT3G07300 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '83.8901'
Avg. embryo expression (LCM): '55.0819'
AT3G07290 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '15.6548'
Avg. embryo expression (LCM): '28.0433'
AT3G07290 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07290 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '5.92829'
Avg. expression score in LCM sample: '2.77791'
Tissue used: 'full endosperm'
AT3G07290 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.32613'
Avg. expression score in LCM sample: '2.77791'
Tissue used: 'pure endosperm, no chalazal'
AT3G07273 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '28.05'
Avg. expression score in LCM sample: '6.93742'
Tissue used: 'pure endosperm, no chalazal'
AT3G07273 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '35.5911'
Avg. expression score in LCM sample: '6.93742'
Tissue used: 'full endosperm'
AT3G07273 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07273 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '50.0029'
Avg. embryo expression (LCM): '5.92765'
AT3G07273 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07273 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07270 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '7.60975'
Avg. expression score in LCM sample: '4.62984'
Tissue used: 'pure endosperm, no chalazal'
AT3G07270 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07270 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '9.58185'
Avg. expression score in LCM sample: '4.62984'
Tissue used: 'full endosperm'
AT3G07270 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '42.9862'
Avg. embryo expression (LCM): '54.8056'
AT3G07260 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.81818 x 10-1 0 5 1 0 0.00% 0.00% 5 1 TAIR8 Avg. embryo expression (dissected): '468.857'
Avg. embryo expression (LCM): '242.355'
AT3G07260 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07260 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 1 0 1 0.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '374.08'
Avg. expression score in LCM sample: '106.369'
Tissue used: 'full endosperm'
AT3G07260 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '379.821'
Avg. expression score in LCM sample: '106.369'
Tissue used: 'pure endosperm, no chalazal'
AT3G07250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.4 x 10-5 208 372 125 488 35.86% 79.61% 580 613 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.8e-07'
Avg. expression score for this sample: '74.0475'
Avg. expression score in LCM sample: '1.91073'
Tissue used: 'pure endosperm, no chalazal'
AT3G07250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.679 x 10-3 170 221 126 342 43.48% 73.08% 391 468 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.8e-07'
Avg. expression score for this sample: '42.8777'
Avg. expression score in LCM sample: '1.91073'
Tissue used: 'full endosperm'
AT3G07250 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.2 x 10-9 59 5 92.19% 64 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07250 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.161 x 10-3 513 832 158 303 38.14% 65.73% 1345 461 TAIR8 Avg. embryo expression (dissected): '184.137'
Avg. embryo expression (LCM): '54.9814'
AT3G07250 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.47607 x 10-1 70 64 52.24% 134 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07250 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.756 x 10-3 29 6 82.86% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07230 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.74 x 10-3 15 25 37.50% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '441.856'
Avg. expression score in LCM sample: '171.275'
Tissue used: 'pure endosperm, no chalazal'
AT3G07230 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.7 x 10-7 66 0 100.00% 66 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07230 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.24898 x 10-1 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 25 2 14 6 92.59% 30.00% 27 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '569.997'
Avg. expression score in LCM sample: '171.275'
Tissue used: 'full endosperm'
AT3G07230 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 0 1 0 100.00% 0.00% 1 1 TAIR8 Avg. embryo expression (dissected): '520.873'
Avg. embryo expression (LCM): '918.924'
AT3G07220 FHA2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '800.537'
Avg. embryo expression (LCM): '373.53'
AT3G07220 FHA2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07220 FHA2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07220 FHA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '599.313'
Avg. expression score in LCM sample: '176.566'
Tissue used: 'full endosperm'
AT3G07220 FHA2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07220 FHA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '684.222'
Avg. expression score in LCM sample: '176.566'
Tissue used: 'pure endosperm, no chalazal'
AT3G07215 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 5 1 3 2 83.33% 40.00% 6 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.352023'
Avg. expression score for this sample: '8.3435'
Avg. expression score in LCM sample: '12.3903'
Tissue used: 'pure endosperm, no chalazal'
AT3G07215 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.71919 x 10-1 11 0 1 4 100.00% 80.00% 11 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.352023'
Avg. expression score for this sample: '36.3335'
Avg. expression score in LCM sample: '12.3903'
Tissue used: 'full endosperm'
AT3G07215 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.14286 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07215 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 9 2 5 0 81.82% 0.00% 11 5 TAIR8 Avg. embryo expression (dissected): '26.9886'
Avg. embryo expression (LCM): '28.2442'
AT3G07215 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.36286 x 10-1 20 2 90.91% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07215 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.9644 x 10-1 3 2 60.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07210 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 2 0 2 33.33% 100.00% 3 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.560669'
Avg. expression score for this sample: '28.6094'
Avg. expression score in LCM sample: '17.5493'
Tissue used: 'pure endosperm, no chalazal'
AT3G07210 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.566 x 10-3 27 1 96.43% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07210 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.84735 x 10-1 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.40952 x 10-1 29 5 10 14 85.29% 58.33% 34 24 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.560669'
Avg. expression score for this sample: '46.3065'
Avg. expression score in LCM sample: '17.5493'
Tissue used: 'full endosperm'
AT3G07210 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.90529 x 10-1 5 5 1 6 50.00% 85.71% 10 7 TAIR8 Avg. embryo expression (dissected): '74.381'
Avg. embryo expression (LCM): '34.6114'
AT3G07200 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 0 2 1 100.00% 33.33% 2 3 TAIR8 Avg. embryo expression (dissected): '70.9598'
Avg. embryo expression (LCM): '28.7591'
AT3G07200 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.7619 x 10-2 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07200 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.85082 x 10-1 7 2 1 6 77.78% 85.71% 9 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.447032'
Avg. expression score for this sample: '67.3209'
Avg. expression score in LCM sample: '40.0665'
Tissue used: 'full endosperm'
AT3G07200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 1 100.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.447032'
Avg. expression score for this sample: '57.4937'
Avg. expression score in LCM sample: '40.0665'
Tissue used: 'pure endosperm, no chalazal'
AT3G07200 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07195 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07195 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.83117'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G07195 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07195 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G07195 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 0 4 6 60.00% 0 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '10.2405'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G07195 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.44505 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07190 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 16 3 84.21% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07190 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 0 5 7 100.00% 58.33% 4 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.085231'
Avg. expression score for this sample: '16.3833'
Avg. expression score in LCM sample: '8.90694'
Tissue used: 'pure endosperm, no chalazal'
AT3G07190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.5439 x 10-2 11 3 2 22 78.57% 91.67% 14 24 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.085231'
Avg. expression score for this sample: '31.2459'
Avg. expression score in LCM sample: '8.90694'
Tissue used: 'full endosperm'
AT3G07190 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 4 0 4 33.33% 100.00% 6 4 TAIR8 Avg. embryo expression (dissected): '22.3456'
Avg. embryo expression (LCM): '40.2251'
AT3G07190 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.65803 x 10-1 20 1 95.24% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07185 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07185 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G07185 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07185 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07185 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G07185 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G07180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.58918 x 10-1 111 30 67 75 78.72% 52.82% 141 142 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.008728'
Avg. expression score for this sample: '206.629'
Avg. expression score in LCM sample: '147.2'
Tissue used: 'pure endosperm, no chalazal'
AT3G07180 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 36 13 73.47% 49 TAIR8 Mutant effect: 'N/A (not a MEG)'