Displaying data sets 93901 - 94000 of 169464 in total
Download CSV  
Show/hide fields
All
None
Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G07480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 32 10 27 44 76.19% 61.97% 42 71 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.487532'
Avg. expression score for this sample: '124.237'
Avg. expression score in LCM sample: '92.3911'
Tissue used: 'full endosperm'
AT3G07480 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0491 x 10-2 53 8 86.89% 61 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07480 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.96793 x 10-1 14 4 77.78% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07480 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.16301 x 10-1 18 14 3 2 56.25% 40.00% 32 5 TAIR8 Avg. embryo expression (dissected): '221.438'
Avg. embryo expression (LCM): '184.209'
AT3G07480 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.5398 x 10-2 84 20 80.77% 104 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.11128 x 10-1 26 6 8 20 81.25% 71.43% 32 28 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.487532'
Avg. expression score for this sample: '150.674'
Avg. expression score in LCM sample: '92.3911'
Tissue used: 'pure endosperm, no chalazal'
AT3G07470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '39.4102'
Avg. expression score in LCM sample: '18.5488'
Tissue used: 'pure endosperm, no chalazal'
AT3G07470 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07470 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '91.8425'
Avg. expression score in LCM sample: '18.5488'
Tissue used: 'full endosperm'
AT3G07470 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '23.5396'
Avg. embryo expression (LCM): '24.3888'
AT3G07470 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07460 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07460 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07460 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07460 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '47.0903'
Avg. embryo expression (LCM): '52.4823'
AT3G07460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '134.13'
Avg. expression score in LCM sample: '79.5598'
Tissue used: 'full endosperm'
AT3G07460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '104.075'
Avg. expression score in LCM sample: '79.5598'
Tissue used: 'pure endosperm, no chalazal'
AT3G07450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '4.0576'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G07450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.74075'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G07450 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07450 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07450 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '15.1444'
Avg. embryo expression (LCM): '0'
AT3G07450 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07440 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07440 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '101.964'
Avg. expression score in LCM sample: '23.4726'
Tissue used: 'full endosperm'
AT3G07440 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '119.598'
Avg. embryo expression (LCM): '68.934'
AT3G07440 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '72.3904'
Avg. expression score in LCM sample: '23.4726'
Tissue used: 'pure endosperm, no chalazal'
AT3G07430 YLMG1-1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.87049 x 10-1 54 24 15 32 69.23% 68.09% 78 47 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.430765'
Avg. expression score for this sample: '102.715'
Avg. expression score in LCM sample: '43.8733'
Tissue used: 'pure endosperm, no chalazal'
AT3G07430 YLMG1-1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.11379 x 10-1 23 19 54.76% 42 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07430 YLMG1-1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.8104 x 10-2 73 23 76.04% 96 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07430 YLMG1-1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.565 x 10-3 126 36 77.78% 162 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07430 YLMG1-1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.692 x 10-3 227 137 27 25 62.36% 48.08% 364 52 TAIR8 Avg. embryo expression (dissected): '398.772'
Avg. embryo expression (LCM): '574.819'
AT3G07430 YLMG1-1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.44587 x 10-1 66 30 60 74 68.75% 55.22% 96 134 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.430765'
Avg. expression score for this sample: '113.198'
Avg. expression score in LCM sample: '43.8733'
Tissue used: 'full endosperm'
AT3G07425 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G07425 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07425 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07425 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G07425 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07425 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G07420 NS2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.91649'
Avg. expression score in LCM sample: '2.66032'
Tissue used: 'pure endosperm, no chalazal'
AT3G07420 NS2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.90909 x 10-1 2 6 25.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07420 NS2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.3 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07420 NS2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 1 0 100.00% 0.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.66894'
Avg. expression score in LCM sample: '2.66032'
Tissue used: 'full endosperm'
AT3G07420 NS2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 0 1 0 100.00% 0.00% 1 1 TAIR8 Avg. embryo expression (dissected): '11.3481'
Avg. embryo expression (LCM): '14.7563'
AT3G07420 NS2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07410 RABA5b endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07410 RABA5b endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07410 RABA5b endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07410 RABA5b embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '531.612'
Avg. embryo expression (LCM): '427.054'
AT3G07410 RABA5b endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '173.157'
Avg. expression score in LCM sample: '152.902'
Tissue used: 'full endosperm'
AT3G07410 RABA5b endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '292.76'
Avg. expression score in LCM sample: '152.902'
Tissue used: 'pure endosperm, no chalazal'
AT3G07400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 2 2 2 60.00% 50.00% 5 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '84.4414'
Avg. expression score in LCM sample: '31.0714'
Tissue used: 'pure endosperm, no chalazal'
AT3G07400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.51642 x 10-1 7 4 2 11 63.64% 84.62% 11 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '123.283'
Avg. expression score in LCM sample: '31.0714'
Tissue used: 'full endosperm'
AT3G07400 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.4859 x 10-2 22 2 91.67% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07400 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07400 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.72548 x 10-1 9 2 3 2 81.82% 40.00% 11 5 TAIR8 Avg. embryo expression (dissected): '186.594'
Avg. embryo expression (LCM): '104.688'
AT3G07400 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.74064 x 10-1 16 2 88.89% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07390 AIR12 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 85 3 96.59% 88 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07390 AIR12 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.84873 x 10-1 180 3 98.36% 183 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07390 AIR12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.9 x 10-22 128 3 5 138 97.71% 96.50% 131 143 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.4e-23'
Avg. expression score for this sample: '214.382'
Avg. expression score in LCM sample: '15.9913'
Tissue used: 'full endosperm'
AT3G07390 AIR12 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Avg. embryo expression (dissected): '6.759'
Avg. embryo expression (LCM): '13.6637'
AT3G07390 AIR12 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.56314 x 10-1 17 1 94.44% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07390 AIR12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.5449 x 10-2 12 0 1 4 100.00% 80.00% 12 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.4e-23'
Avg. expression score for this sample: '38.3354'
Avg. expression score in LCM sample: '15.9913'
Tissue used: 'pure endosperm, no chalazal'
AT3G07380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.797557'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G07380 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07380 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07380 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07380 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '1.95914'
AT3G07380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.20813'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G07370 CHIP endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.121 x 10-3 74 41 36 176 64.35% 83.02% 115 212 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.012459'
Avg. expression score for this sample: '219.978'
Avg. expression score in LCM sample: '41.2864'
Tissue used: 'full endosperm'
AT3G07370 CHIP endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.534 x 10-2 358 88 80.27% 446 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07370 CHIP endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.259 x 10-3 35 2 94.59% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07370 CHIP embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.83247 x 10-1 20 28 6 6 41.67% 50.00% 48 12 TAIR8 Avg. embryo expression (dissected): '115.174'
Avg. embryo expression (LCM): '65.7944'
AT3G07370 CHIP endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.314 x 10-3 297 60 83.19% 357 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07370 CHIP endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.81803 x 10-1 36 21 16 46 63.16% 74.19% 57 62 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.012459'
Avg. expression score for this sample: '131.888'
Avg. expression score in LCM sample: '41.2864'
Tissue used: 'pure endosperm, no chalazal'
AT3G07360 PUB9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 872 385 529 959 69.37% 64.45% 1257 1488 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.4e-30'
Avg. expression score for this sample: '1246.37'
Avg. expression score in LCM sample: '245.382'
Tissue used: 'pure endosperm, no chalazal'
AT3G07360 PUB9 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.9 x 10-5 481 100 82.79% 581 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07360 PUB9 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1045 87 92.31% 1132 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07360 PUB9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 1573 503 493 2345 75.77% 82.63% 2076 2838 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.4e-30'
Avg. expression score for this sample: '1514.05'
Avg. expression score in LCM sample: '245.382'
Tissue used: 'full endosperm'
AT3G07360 PUB9 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.14662 x 10-1 437 470 126 179 48.18% 58.69% 907 305 TAIR8 Avg. embryo expression (dissected): '848.989'
Avg. embryo expression (LCM): '201.214'
AT3G07360 PUB9 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.3 x 10-5 331 61 84.44% 392 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07350 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.42266 x 10-1 3 4 42.86% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07350 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07350 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07350 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.0909 x 10-2 4 0 0 2 100.00% 100.00% 4 2 TAIR8 Avg. embryo expression (dissected): '6.00943'
Avg. embryo expression (LCM): '0'
AT3G07350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 11 7 2 6 61.11% 75.00% 18 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '21.5495'
Avg. expression score in LCM sample: '22.2232'
Tissue used: 'full endosperm'
AT3G07350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 22 7 9 10 75.86% 52.63% 29 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '61.9973'
Avg. expression score in LCM sample: '22.2232'
Tissue used: 'pure endosperm, no chalazal'
AT3G07340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 2 100.00% 100.00% 2 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.019656'
Avg. expression score for this sample: '2.11948'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G07340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.1073 x 10-2 5 0 0 10 100.00% 100.00% 5 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.019656'
Avg. expression score for this sample: '11.8734'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G07340 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 71 0 100.00% 71 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07340 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07340 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.14286 x 10-1 3 0 0 1 100.00% 100.00% 3 1 TAIR8 Avg. embryo expression (dissected): '1.60332'
Avg. embryo expression (LCM): '0'
AT3G07340 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 10 0 100.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07330 CSLC6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.1 x 10-11 149 6 96.13% 155 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07330 CSLC6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 436 7 98.42% 443 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G07330 CSLC6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.931 x 10-3 219 44 88 181 83.27% 67.29% 263 269 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000857'
Avg. expression score for this sample: '83.711'
Avg. expression score in LCM sample: '63.98'
Tissue used: 'full endosperm'
AT3G07330 CSLC6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.9243 x 10-1 81 56 24 20 59.12% 45.45% 137 44 TAIR8 Avg. embryo expression (dissected): '68.742'
Avg. embryo expression (LCM): '53.2735'