| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT3G07780 | OBE1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.50626 x 10-1 | 15 | 14 | 4 | 5 | 51.72% | 55.56% | 29 | 9 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.162337' Avg. expression score for this sample: '3177.35' Avg. expression score in LCM sample: '433.324' Tissue used: 'full endosperm' |
||||
| AT3G07780 | OBE1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 5 | 6 | 0 | 2 | 45.45% | 100.00% | 11 | 2 | TAIR8 |
Avg. embryo expression (dissected): '2396.53' Avg. embryo expression (LCM): '627.276' |
|||
| AT3G07770 | Hsp89.1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.0222 x 10-2 | 223 | 168 | 44 | 54 | 57.03% | 55.10% | 391 | 98 | TAIR8 |
Avg. embryo expression (dissected): '442.219' Avg. embryo expression (LCM): '453.465' |
|||
| AT3G07770 | Hsp89.1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.589 x 10-3 | 81 | 10 | 31 | 82 | 89.01% | 72.57% | 91 | 113 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.071038' Avg. expression score for this sample: '185.449' Avg. expression score in LCM sample: '68.8891' Tissue used: 'full endosperm' |
||||
| AT3G07770 | Hsp89.1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.06405 x 10-1 | 47 | 11 | 81.03% | 58 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G07770 | Hsp89.1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.5312 x 10-2 | 116 | 66 | 63.74% | 182 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G07770 | Hsp89.1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 79 | 39 | 45 | 86 | 66.95% | 65.65% | 118 | 131 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.071038' Avg. expression score for this sample: '150.733' Avg. expression score in LCM sample: '68.8891' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT3G07770 | Hsp89.1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.5 x 10-11 | 203 | 14 | 93.55% | 217 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G07760 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.37395 x 10-1 | 6 | 0 | 100.00% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G07760 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 4 | 1 | 80.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G07760 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G07760 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 2 | 0 | 2 | 2 | 100.00% | 50.00% | 2 | 4 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '78.8889' Avg. expression score in LCM sample: '48.8853' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT3G07760 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 3 | 2 | 0 | 0 | 60.00% | 5 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '54.8415' Avg. expression score in LCM sample: '48.8853' Tissue used: 'full endosperm' |
||||||
| AT3G07760 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | TAIR8 |
Avg. embryo expression (dissected): '37.281' Avg. embryo expression (LCM): '41.7698' |
|||||
| AT3G07750 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 15 | 9 | 6 | 1 | 62.50% | 14.29% | 24 | 7 | TAIR8 |
Avg. embryo expression (dissected): '76.7369' Avg. embryo expression (LCM): '57.4178' |
||||
| AT3G07750 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.3858 x 10-2 | 14 | 1 | 2 | 13 | 93.33% | 86.67% | 15 | 15 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.422021' Avg. expression score for this sample: '39.3981' Avg. expression score in LCM sample: '7.46654' Tissue used: 'full endosperm' |
|||||
| AT3G07750 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.8917 x 10-1 | 7 | 9 | 3 | 11 | 43.75% | 78.57% | 16 | 14 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.422021' Avg. expression score for this sample: '26.9339' Avg. expression score in LCM sample: '7.46654' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT3G07750 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.63591 x 10-1 | 33 | 7 | 82.50% | 40 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G07750 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 34 | 12 | 73.91% | 46 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G07750 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.05749 x 10-1 | 4 | 4 | 50.00% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G07740 | ADA2A | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.6 x 10-5 | 3 | 12 | 20.00% | 15 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G07740 | ADA2A | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.48819 x 10-1 | 116 | 56 | 67.44% | 172 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G07740 | ADA2A | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.79184 x 10-1 | 30 | 6 | 13 | 20 | 83.33% | 60.61% | 36 | 33 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.084348' Avg. expression score for this sample: '82.5585' Avg. expression score in LCM sample: '41.0366' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT3G07740 | ADA2A | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.836 x 10-3 | 112 | 18 | 86.15% | 130 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G07740 | ADA2A | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.76262 x 10-1 | 14 | 23 | 3 | 6 | 37.84% | 66.67% | 37 | 9 | TAIR8 |
Avg. embryo expression (dissected): '101.536' Avg. embryo expression (LCM): '93.9633' |
|||
| AT3G07740 | ADA2A | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.14406 x 10-1 | 57 | 5 | 36 | 66 | 91.94% | 64.71% | 62 | 102 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.084348' Avg. expression score for this sample: '158.403' Avg. expression score in LCM sample: '41.0366' Tissue used: 'full endosperm' |
||||
| AT3G07730 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.98122 x 10-1 | 16 | 13 | 17 | 29 | 55.17% | 63.04% | 29 | 46 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.353332' Avg. expression score for this sample: '70.5475' Avg. expression score in LCM sample: '2.07241' Tissue used: 'full endosperm' |
|||||
| AT3G07730 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.27507 x 10-1 | 50 | 39 | 7 | 14 | 56.18% | 66.67% | 89 | 21 | TAIR8 |
Avg. embryo expression (dissected): '225.763' Avg. embryo expression (LCM): '284.577' |
||||
| AT3G07730 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.14 x 10-4 | 33 | 4 | 89.19% | 37 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G07730 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G07730 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.9 x 10-5 | 32 | 2 | 94.12% | 34 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G07730 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.77713 x 10-1 | 5 | 3 | 4 | 2 | 62.50% | 33.33% | 8 | 6 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.353332' Avg. expression score for this sample: '28.4913' Avg. expression score in LCM sample: '2.07241' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT3G07720 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.5733 x 10-2 | 33 | 12 | 15 | 67 | 73.33% | 81.71% | 45 | 82 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1.4e-10' Avg. expression score for this sample: '490.967' Avg. expression score in LCM sample: '196.82' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT3G07720 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0793 x 10-2 | 230 | 20 | 92.00% | 250 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G07720 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.14837 x 10-1 | 20 | 24 | 9 | 7 | 45.45% | 43.75% | 44 | 16 | TAIR8 |
Avg. embryo expression (dissected): '524.557' Avg. embryo expression (LCM): '269.683' |
||||
| AT3G07720 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 8.6 x 10-7 | 435 | 23 | 94.98% | 458 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G07720 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 8.47725 x 10-1 | 54 | 8 | 87.10% | 62 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G07720 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.2 x 10-10 | 111 | 26 | 11 | 160 | 81.02% | 93.57% | 137 | 171 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1.4e-10' Avg. expression score for this sample: '544.113' Avg. expression score in LCM sample: '196.82' Tissue used: 'full endosperm' |
|||||
| AT3G07710 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.1073 x 10-2 | 11 | 0 | 0 | 4 | 100.00% | 100.00% | 11 | 4 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.00431' Avg. expression score for this sample: '21.6625' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||
| AT3G07710 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G07710 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G07710 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.54545 x 10-1 | 5 | 0 | 0 | 1 | 100.00% | 100.00% | 5 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.00431' Avg. expression score for this sample: '9.4069' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT3G07710 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 40 | 0 | 100.00% | 40 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G07710 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT3G07700 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 1 | 0 | 1 | 0 | 100.00% | 0.00% | 1 | 1 | TAIR8 |
Avg. embryo expression (dissected): '40.9259' Avg. embryo expression (LCM): '36.1561' |
||||
| AT3G07700 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.06779 x 10-1 | 30 | 2 | 93.75% | 32 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G07700 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G07700 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.08915 x 10-1 | 28 | 2 | 93.33% | 30 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G07700 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.76471 x 10-1 | 3 | 1 | 0 | 5 | 75.00% | 100.00% | 4 | 5 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.063776' Avg. expression score for this sample: '160.725' Avg. expression score in LCM sample: '50.8989' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT3G07700 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.22199 x 10-1 | 18 | 8 | 2 | 25 | 69.23% | 92.59% | 26 | 27 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.063776' Avg. expression score for this sample: '336.378' Avg. expression score in LCM sample: '50.8989' Tissue used: 'full endosperm' |
|||||
| AT3G07690 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.68582 x 10-1 | 5 | 0 | 1 | 9 | 100.00% | 90.00% | 5 | 10 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.484078' Avg. expression score for this sample: '271.987' Avg. expression score in LCM sample: '149.228' Tissue used: 'full endosperm' |
|||||
| AT3G07690 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 3 | 1 | 2 | 0 | 75.00% | 0.00% | 4 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.484078' Avg. expression score for this sample: '291.413' Avg. expression score in LCM sample: '149.228' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT3G07690 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G07690 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Avg. embryo expression (dissected): '256.255' Avg. embryo expression (LCM): '140.116' |
|||||
| AT3G07690 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.87356 x 10-1 | 9 | 0 | 100.00% | 9 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G07690 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G07680 | p24beta2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.153 x 10-3 | 123 | 17 | 87.86% | 140 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G07680 | p24beta2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.2 x 10-8 | 711 | 118 | 85.77% | 829 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G07680 | p24beta2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.23487 x 10-1 | 48 | 40 | 21 | 96 | 54.55% | 82.05% | 88 | 117 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '9.1e-06' Avg. expression score for this sample: '113.266' Avg. expression score in LCM sample: '62.9071' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT3G07680 | p24beta2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.6 x 10-7 | 516 | 84 | 86.00% | 600 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G07680 | p24beta2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.034 x 10-2 | 37 | 84 | 17 | 28 | 30.58% | 62.22% | 121 | 45 | TAIR8 |
Avg. embryo expression (dissected): '141.781' Avg. embryo expression (LCM): '144.16' |
|||
| AT3G07680 | p24beta2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.0 x 10-6 | 182 | 99 | 84 | 436 | 64.77% | 83.85% | 281 | 520 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '9.1e-06' Avg. expression score for this sample: '226.448' Avg. expression score in LCM sample: '62.9071' Tissue used: 'full endosperm' |
||||
| AT3G07670 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '17.3624' Avg. expression score in LCM sample: '7.39305' Tissue used: 'full endosperm' |
|||||||
| AT3G07670 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '39.9217' Avg. embryo expression (LCM): '49.845' |
||||||
| AT3G07670 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G07670 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G07670 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G07670 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '12.5633' Avg. expression score in LCM sample: '7.39305' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT3G07660 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.62294 x 10-1 | 14 | 2 | 18 | 7 | 87.50% | 28.00% | 16 | 25 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.066895' Avg. expression score for this sample: '165.419' Avg. expression score in LCM sample: '168.923' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT3G07660 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.24934 x 10-1 | 41 | 44 | 48.24% | 85 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G07660 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 23 | 10 | 11 | 0 | 69.70% | 0.00% | 33 | 11 | TAIR8 |
Avg. embryo expression (dissected): '244.314' Avg. embryo expression (LCM): '205.132' |
||||
| AT3G07660 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.3 x 10-11 | 77 | 3 | 96.25% | 80 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G07660 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.00699 x 10-1 | 3 | 4 | 42.86% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G07660 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.60727 x 10-1 | 33 | 2 | 32 | 13 | 94.29% | 28.89% | 35 | 45 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.066895' Avg. expression score for this sample: '161.924' Avg. expression score in LCM sample: '168.923' Tissue used: 'full endosperm' |
|||||
| AT3G07650 | COL9 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '38.1058' Avg. expression score in LCM sample: '40.5515' Tissue used: 'full endosperm' |
||||||
| AT3G07650 | COL9 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G07650 | COL9 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G07650 | COL9 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '25.349' Avg. expression score in LCM sample: '40.5515' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT3G07650 | COL9 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G07650 | COL9 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '40.0209' Avg. embryo expression (LCM): '37.2236' |
|||||
| AT3G07640 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.36531 x 10-1 | 20 | 11 | 4 | 1 | 64.52% | 20.00% | 31 | 5 | TAIR8 |
Avg. embryo expression (dissected): '84.749' Avg. embryo expression (LCM): '95.8219' |
||||
| AT3G07640 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.50996 x 10-1 | 27 | 8 | 77.14% | 35 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G07640 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.53589 x 10-1 | 10 | 3 | 76.92% | 13 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G07640 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.02 x 10-4 | 62 | 4 | 93.94% | 66 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G07640 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 4 | 5 | 2 | 12 | 44.44% | 85.71% | 9 | 14 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.615886' Avg. expression score for this sample: '32.33' Avg. expression score in LCM sample: '23.9282' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT3G07640 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.92897 x 10-1 | 27 | 2 | 15 | 16 | 93.10% | 51.61% | 29 | 31 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.615886' Avg. expression score for this sample: '47.4774' Avg. expression score in LCM sample: '23.9282' Tissue used: 'full endosperm' |
|||||
| AT3G07630 | ADT2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 2 | 1 | 1 | 1 | 66.67% | 50.00% | 3 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '26.634' Avg. expression score in LCM sample: '26.3534' Tissue used: 'full endosperm' |
||||
| AT3G07630 | ADT2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 2 | 0 | 0 | 1 | 100.00% | 100.00% | 2 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '23.0106' Avg. expression score in LCM sample: '26.3534' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT3G07630 | ADT2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 4 | 1 | 80.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G07630 | ADT2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 2 | 0 | 0 | 33.33% | 3 | 0 | TAIR8 |
Avg. embryo expression (dissected): '32.021' Avg. embryo expression (LCM): '65.8823' |
||||
| AT3G07630 | ADT2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G07630 | ADT2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G07620 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G07620 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G07620 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.406419' Avg. expression score for this sample: '2.02504' Avg. expression score in LCM sample: '2.0871' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT3G07620 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G07620 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT3G07620 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.00105 x 10-1 | 3 | 6 | 7 | 10 | 33.33% | 58.82% | 9 | 17 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.406419' Avg. expression score for this sample: '22.1734' Avg. expression score in LCM sample: '2.0871' Tissue used: 'full endosperm' |
|||||
| AT3G07610 | IBM1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.51642 x 10-1 | 2 | 3 | 3 | 16 | 40.00% | 84.21% | 5 | 19 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '85.6133' Avg. expression score in LCM sample: '23.0022' Tissue used: 'full endosperm' |
||||
| AT3G07610 | IBM1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 3 | 2 | 1 | 0 | 60.00% | 0.00% | 5 | 1 | TAIR8 |
Avg. embryo expression (dissected): '138.483' Avg. embryo expression (LCM): '77.7753' |