Displaying data sets 93301 - 93400 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G08870 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003758'
Avg. expression score for this sample: '.117028'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G08870 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08870 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 19 0 100.00% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08870 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G08870 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.901 x 10-3 6 0 0 16 100.00% 100.00% 6 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003758'
Avg. expression score for this sample: '1.85152'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G08870 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.81764 x 10-1 55 6 90.16% 61 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08860 PYD4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 92 0 100.00% 92 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08860 PYD4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.0741 x 10-2 6 0 0 8 100.00% 100.00% 6 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.6e-16'
Avg. expression score for this sample: '14.0819'
Avg. expression score in LCM sample: '.867177'
Tissue used: 'pure endosperm, no chalazal'
AT3G08860 PYD4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.6 x 10-14 23 0 0 97 100.00% 100.00% 23 97 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.6e-16'
Avg. expression score for this sample: '119.151'
Avg. expression score in LCM sample: '.867177'
Tissue used: 'full endosperm'
AT3G08860 PYD4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 187 0 100.00% 187 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08860 PYD4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.28952'
Avg. embryo expression (LCM): '0'
AT3G08860 PYD4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 40 0 100.00% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08850 RAPTOR1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08850 RAPTOR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 8 4 2 3 66.67% 60.00% 12 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '266.294'
Avg. expression score in LCM sample: '120.126'
Tissue used: 'full endosperm'
AT3G08850 RAPTOR1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 1 0 0 66.67% 3 0 TAIR8 Avg. embryo expression (dissected): '163.602'
Avg. embryo expression (LCM): '118.616'
AT3G08850 RAPTOR1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.68092 x 10-1 20 3 86.96% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08850 RAPTOR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 2 0 3 50.00% 100.00% 4 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '191.744'
Avg. expression score in LCM sample: '120.126'
Tissue used: 'pure endosperm, no chalazal'
AT3G08850 RAPTOR1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.14737 x 10-1 13 1 92.86% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08840 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.3 x 10-10 109 8 93.16% 117 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 56 28 29 62 66.67% 68.13% 84 91 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.769065'
Avg. expression score for this sample: '57.6103'
Avg. expression score in LCM sample: '34.8341'
Tissue used: 'pure endosperm, no chalazal'
AT3G08840 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.8 x 10-6 95 13 87.96% 108 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08840 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.87367 x 10-1 21 8 72.41% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08840 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.54052 x 10-1 104 89 30 26 53.89% 46.43% 193 56 TAIR8 Avg. embryo expression (dissected): '141.537'
Avg. embryo expression (LCM): '62.3659'
AT3G08840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.83933 x 10-1 156 97 59 170 61.66% 74.24% 253 229 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.769065'
Avg. expression score for this sample: '102.434'
Avg. expression score in LCM sample: '34.8341'
Tissue used: 'full endosperm'
AT3G08820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 5.92075 x 10-1 0 0 4 3 42.86% 0 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.592075'
Avg. expression score for this sample: '22.829'
Avg. expression score in LCM sample: '21.4002'
Tissue used: 'full endosperm'
AT3G08820 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08820 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 2 0 0 50.00% 4 0 TAIR8 Avg. embryo expression (dissected): '62.7397'
Avg. embryo expression (LCM): '57.2797'
AT3G08820 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.592075'
Avg. expression score for this sample: '23.7535'
Avg. expression score in LCM sample: '21.4002'
Tissue used: 'pure endosperm, no chalazal'
AT3G08820 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 3 50.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08810 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '5.81394'
Avg. expression score in LCM sample: '6.92272'
Tissue used: 'pure endosperm, no chalazal'
AT3G08810 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '13.2279'
Avg. expression score in LCM sample: '6.92272'
Tissue used: 'full endosperm'
AT3G08810 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.820117'
Avg. embryo expression (LCM): '0'
AT3G08810 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08800 SIEL endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 11 3 78.57% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08800 SIEL endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08800 SIEL embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 2 1 0 60.00% 0.00% 5 1 TAIR8 Avg. embryo expression (dissected): '11.8158'
Avg. embryo expression (LCM): '13.827'
AT3G08800 SIEL endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.47032 x 10-1 6 0 3 10 100.00% 76.92% 6 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.38084'
Avg. expression score for this sample: '9.65044'
Avg. expression score in LCM sample: '.470333'
Tissue used: 'full endosperm'
AT3G08800 SIEL endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 3 0 2 40.00% 100.00% 5 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.38084'
Avg. expression score for this sample: '5.26002'
Avg. expression score in LCM sample: '.470333'
Tissue used: 'pure endosperm, no chalazal'
AT3G08800 SIEL endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 10 3 76.92% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08790 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.565414'
Avg. expression score in LCM sample: '7.29017'
Tissue used: 'pure endosperm, no chalazal'
AT3G08790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.67276'
Avg. expression score in LCM sample: '7.29017'
Tissue used: 'full endosperm'
AT3G08790 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08790 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.640178'
Avg. embryo expression (LCM): '0'
AT3G08790 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08780 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08780 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '38.0833'
Avg. expression score in LCM sample: '28.999'
Tissue used: 'full endosperm'
AT3G08780 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '21.8131'
Avg. embryo expression (LCM): '25.7325'
AT3G08780 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08780 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '44.6922'
Avg. expression score in LCM sample: '28.999'
Tissue used: 'pure endosperm, no chalazal'
AT3G08780 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08770 LTP6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08770 LTP6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3015.91'
Avg. expression score in LCM sample: '188.06'
Tissue used: 'pure endosperm, no chalazal'
AT3G08770 LTP6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08770 LTP6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08770 LTP6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '199.553'
Avg. embryo expression (LCM): '93.0214'
AT3G08770 LTP6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '4635.84'
Avg. expression score in LCM sample: '188.06'
Tissue used: 'full endosperm'
AT3G08762 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G08762 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08762 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G08762 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08762 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G08762 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08760 ATSIK endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08760 ATSIK endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '23.0235'
Avg. expression score in LCM sample: '4.80622'
Tissue used: 'pure endosperm, no chalazal'
AT3G08760 ATSIK endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08760 ATSIK endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '33.1922'
Avg. expression score in LCM sample: '4.80622'
Tissue used: 'full endosperm'
AT3G08760 ATSIK embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '61.6521'
Avg. embryo expression (LCM): '39.2581'
AT3G08760 ATSIK endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08750 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08750 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08750 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 5.2381 x 10-1 1 4 0 0 20.00% 5 0 TAIR8 Avg. embryo expression (dissected): '3.81271'
Avg. embryo expression (LCM): '0'
AT3G08750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.4472 x 10-1 11 0 2 0 100.00% 0.00% 11 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.384541'
Avg. expression score for this sample: '4.0413'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G08750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.384541'
Avg. expression score for this sample: '.697326'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G08750 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08740 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.90567 x 10-1 13 5 72.22% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 8 6 1 10 57.14% 90.91% 14 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '258.899'
Avg. expression score in LCM sample: '41.7274'
Tissue used: 'pure endosperm, no chalazal'
AT3G08740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 31 8 18 21 79.49% 53.85% 39 39 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '201.988'
Avg. expression score in LCM sample: '41.7274'
Tissue used: 'full endosperm'
AT3G08740 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.056 9 0 100.00% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08740 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.68598 x 10-1 31 27 8 7 53.45% 46.67% 58 15 TAIR8 Avg. embryo expression (dissected): '787.332'
Avg. embryo expression (LCM): '480.692'
AT3G08740 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.1978 x 10-1 3 5 37.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08730 PK1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08730 PK1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '221.198'
Avg. expression score in LCM sample: '185.106'
Tissue used: 'full endosperm'
AT3G08730 PK1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '233.412'
Avg. embryo expression (LCM): '258.204'
AT3G08730 PK1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08730 PK1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '247.5'
Avg. expression score in LCM sample: '185.106'
Tissue used: 'pure endosperm, no chalazal'
AT3G08730 PK1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08720 S6K2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.94908 x 10-1 112 30 78.87% 142 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08720 S6K2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 6 3 3 4 66.67% 57.14% 9 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.139343'
Avg. expression score for this sample: '86.5806'
Avg. expression score in LCM sample: '15.4475'
Tissue used: 'pure endosperm, no chalazal'
AT3G08720 S6K2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.6 x 10-6 126 8 94.03% 134 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08720 S6K2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 10 3 76.92% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08720 S6K2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 2 1 0 60.00% 0.00% 5 1 TAIR8 Avg. embryo expression (dissected): '50.1251'
Avg. embryo expression (LCM): '8.33889'
AT3G08720 S6K2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.9279 x 10-2 49 5 29 61 90.74% 67.78% 54 90 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.139343'
Avg. expression score for this sample: '249.148'
Avg. expression score in LCM sample: '15.4475'
Tissue used: 'full endosperm'
AT3G08710 TH9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.8642 x 10-2 25 3 0 9 89.29% 100.00% 28 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002948'
Avg. expression score for this sample: '148.652'
Avg. expression score in LCM sample: '47.9446'
Tissue used: 'full endosperm'
AT3G08710 TH9 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G08710 TH9 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 2 0 1 50.00% 100.00% 4 1 TAIR8 Avg. embryo expression (dissected): '93.7852'
Avg. embryo expression (LCM): '103.118'
AT3G08710 TH9 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'