Displaying data sets 92301 - 92400 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G10415 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G10415 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10415 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G10415 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G10410 SCPL49 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '305.396'
Avg. expression score in LCM sample: '205.242'
Tissue used: 'pure endosperm, no chalazal'
AT3G10410 SCPL49 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10410 SCPL49 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10410 SCPL49 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '213.325'
Avg. embryo expression (LCM): '98.0322'
AT3G10410 SCPL49 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '552.168'
Avg. expression score in LCM sample: '205.242'
Tissue used: 'full endosperm'
AT3G10410 SCPL49 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10405 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10405 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '74.6937'
Avg. embryo expression (LCM): '44.7713'
AT3G10405 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '65.264'
Avg. expression score in LCM sample: '9.65653'
Tissue used: 'full endosperm'
AT3G10405 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '44.2795'
Avg. expression score in LCM sample: '9.65653'
Tissue used: 'pure endosperm, no chalazal'
AT3G10405 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10405 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10400 U11/U12-31K endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10400 U11/U12-31K endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10400 U11/U12-31K endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '121.423'
Avg. expression score in LCM sample: '75.0623'
Tissue used: 'full endosperm'
AT3G10400 U11/U12-31K endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10400 U11/U12-31K embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '69.0441'
Avg. embryo expression (LCM): '108.443'
AT3G10400 U11/U12-31K endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '116.789'
Avg. expression score in LCM sample: '75.0623'
Tissue used: 'pure endosperm, no chalazal'
AT3G10390 FLD endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.86619 x 10-1 39 20 23 39 66.10% 62.90% 59 62 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.85333'
Avg. expression score for this sample: '109.936'
Avg. expression score in LCM sample: '98.0645'
Tissue used: 'pure endosperm, no chalazal'
AT3G10390 FLD endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.64699 x 10-1 73 26 73.74% 99 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10390 FLD endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.031 x 10-3 82 18 82.00% 100 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10390 FLD embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.9356 x 10-1 39 44 17 15 46.99% 46.88% 83 32 TAIR8 Avg. embryo expression (dissected): '166.279'
Avg. embryo expression (LCM): '114.559'
AT3G10390 FLD endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 43 23 24 50 65.15% 67.57% 66 74 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.85333'
Avg. expression score for this sample: '123.797'
Avg. expression score in LCM sample: '98.0645'
Tissue used: 'full endosperm'
AT3G10390 FLD endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.20385 x 10-1 16 7 69.57% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10380 SEC8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 5 2 71.43% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10380 SEC8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.51186 x 10-1 5 7 1 7 41.67% 87.50% 12 8 TAIR8 Avg. embryo expression (dissected): '89.109'
Avg. embryo expression (LCM): '55.3833'
AT3G10380 SEC8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 30 15 17 32 66.67% 65.31% 45 49 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '93.3921'
Avg. expression score in LCM sample: '110.617'
Tissue used: 'full endosperm'
AT3G10380 SEC8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 9 9 5 21 50.00% 80.77% 18 26 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '100.608'
Avg. expression score in LCM sample: '110.617'
Tissue used: 'pure endosperm, no chalazal'
AT3G10380 SEC8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.01872 x 10-1 50 14 78.12% 64 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10380 SEC8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.62624 x 10-1 42 12 77.78% 54 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10370 SDP6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.05894 x 10-1 204 53 79.38% 257 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10370 SDP6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.0 x 10-8 307 34 90.03% 341 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10370 SDP6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.57885 x 10-1 76 37 26 94 67.26% 78.33% 113 120 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.043066'
Avg. expression score for this sample: '91.0276'
Avg. expression score in LCM sample: '83.2049'
Tissue used: 'full endosperm'
AT3G10370 SDP6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.69273 x 10-1 36 9 80.00% 45 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10370 SDP6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.50639 x 10-1 29 19 4 6 60.42% 60.00% 48 10 TAIR8 Avg. embryo expression (dissected): '89.0051'
Avg. embryo expression (LCM): '54.994'
AT3G10370 SDP6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.75516 x 10-1 54 26 7 45 67.50% 86.54% 80 52 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.043066'
Avg. expression score for this sample: '113.223'
Avg. expression score in LCM sample: '83.2049'
Tissue used: 'pure endosperm, no chalazal'
AT3G10360 PUM4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 26 9 13 20 74.29% 60.61% 35 33 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.651262'
Avg. expression score for this sample: '61.6244'
Avg. expression score in LCM sample: '65.391'
Tissue used: 'pure endosperm, no chalazal'
AT3G10360 PUM4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.1 x 10-7 67 2 97.10% 69 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10360 PUM4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.8792 x 10-2 41 7 85.42% 48 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10360 PUM4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.77213 x 10-1 14 5 4 4 73.68% 50.00% 19 8 TAIR8 Avg. embryo expression (dissected): '46.1416'
Avg. embryo expression (LCM): '37.3743'
AT3G10360 PUM4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.65579 x 10-1 38 18 15 41 67.86% 73.21% 56 56 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.651262'
Avg. expression score for this sample: '96.2114'
Avg. expression score in LCM sample: '65.391'
Tissue used: 'full endosperm'
AT3G10360 PUM4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.58629 x 10-1 14 2 87.50% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10350 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10350 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '56.7621'
Avg. embryo expression (LCM): '107.062'
AT3G10350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '86.7848'
Avg. expression score in LCM sample: '29.2048'
Tissue used: 'full endosperm'
AT3G10350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '36.4488'
Avg. expression score in LCM sample: '29.2048'
Tissue used: 'pure endosperm, no chalazal'
AT3G10350 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10350 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10340 PAL4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.11163 x 10-1 11 2 84.62% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10340 PAL4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 6 1 85.71% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10340 PAL4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.2784 x 10-1 5 4 5 28 55.56% 84.85% 9 33 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.471261'
Avg. expression score for this sample: '71.9429'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G10340 PAL4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10340 PAL4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.31499 x 10-1 18 22 14 13 45.00% 48.15% 40 27 TAIR8 Avg. embryo expression (dissected): '581.869'
Avg. embryo expression (LCM): '52.0679'
AT3G10340 PAL4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.471261'
Avg. expression score for this sample: '24.0963'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G10330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.35117 x 10-1 4 1 1 5 80.00% 83.33% 5 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.144603'
Avg. expression score for this sample: '57.2371'
Avg. expression score in LCM sample: '22.9287'
Tissue used: 'pure endosperm, no chalazal'
AT3G10330 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.78738 x 10-1 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10330 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.31239 x 10-1 13 1 92.86% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10330 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 2 0 0 60.00% 5 0 TAIR8 Avg. embryo expression (dissected): '105.955'
Avg. embryo expression (LCM): '73.4677'
AT3G10330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.60002 x 10-1 15 3 3 12 83.33% 80.00% 18 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.144603'
Avg. expression score for this sample: '89.1736'
Avg. expression score in LCM sample: '22.9287'
Tissue used: 'full endosperm'
AT3G10330 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10320 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 34 0 100.00% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10320 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Avg. embryo expression (dissected): '1.59462'
Avg. embryo expression (LCM): '0'
AT3G10320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 135 0 0 202 100.00% 100.00% 135 202 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '79.4791'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G10320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.03 x 10-4 35 0 1 5 100.00% 83.33% 35 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '11.4357'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G10320 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 695 2 99.71% 697 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10320 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 153 0 100.00% 153 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10310 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.7235 x 10-2 8 15 34.78% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.4871 x 10-2 36 25 56 69 59.02% 55.20% 61 125 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.076991'
Avg. expression score for this sample: '25.2262'
Avg. expression score in LCM sample: '36.7889'
Tissue used: 'full endosperm'
AT3G10310 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.64479 x 10-1 9 9 50.00% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10310 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.7272 x 10-1 136 104 34 37 56.67% 52.11% 240 71 TAIR8 Avg. embryo expression (dissected): '95.557'
Avg. embryo expression (LCM): '89.6054'
AT3G10310 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.98359 x 10-1 12 4 75.00% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.13289 x 10-1 57 30 23 37 65.52% 61.67% 87 60 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.076991'
Avg. expression score for this sample: '28.1417'
Avg. expression score in LCM sample: '36.7889'
Tissue used: 'pure endosperm, no chalazal'
AT3G10300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.6888 x 10-2 17 1 25 0 94.44% 0.00% 18 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.012517'
Avg. expression score for this sample: '141.733'
Avg. expression score in LCM sample: '16.7409'
Tissue used: 'pure endosperm, no chalazal'
AT3G10300 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.7 x 10-5 17 0 100.00% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10300 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.8941 x 10-2 0 8 0.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10300 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 0 1 0 100.00% 0.00% 1 1 TAIR8 Avg. embryo expression (dissected): '30.1586'
Avg. embryo expression (LCM): '8.33889'
AT3G10300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.6787 x 10-1 21 0 19 1 100.00% 5.00% 21 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.012517'
Avg. expression score for this sample: '62.8911'
Avg. expression score in LCM sample: '16.7409'
Tissue used: 'full endosperm'
AT3G10300 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.0073 x 10-2 1 9 10.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10290 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10290 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.40867 x 10-1 6 0 1 3 100.00% 75.00% 6 4 TAIR8 Avg. embryo expression (dissected): '44.8337'
Avg. embryo expression (LCM): '28.3573'
AT3G10290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 5 1 5 11 83.33% 68.75% 6 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.749447'
Avg. expression score for this sample: '26.0223'
Avg. expression score in LCM sample: '54.0736'
Tissue used: 'full endosperm'
AT3G10290 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.6003 x 10-2 59 55 51.75% 114 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.749447'
Avg. expression score for this sample: '38.7116'
Avg. expression score in LCM sample: '54.0736'
Tissue used: 'pure endosperm, no chalazal'
AT3G10290 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.54082 x 10-1 477 222 68.24% 699 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10280 KCS14 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10280 KCS14 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '162.371'
Avg. expression score in LCM sample: '16.006'
Tissue used: 'full endosperm'
AT3G10280 KCS14 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10280 KCS14 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.01501'
Avg. embryo expression (LCM): '1.82099'
AT3G10280 KCS14 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '43.7915'
Avg. expression score in LCM sample: '16.006'
Tissue used: 'pure endosperm, no chalazal'
AT3G10280 KCS14 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10270 GYRB1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10270 GYRB1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '108.603'
Avg. expression score in LCM sample: '51.2663'
Tissue used: 'pure endosperm, no chalazal'
AT3G10270 GYRB1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G10270 GYRB1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '284.78'
Avg. embryo expression (LCM): '246.676'
AT3G10270 GYRB1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '96.7766'
Avg. expression score in LCM sample: '51.2663'
Tissue used: 'full endosperm'
AT3G10270 GYRB1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'