| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G315121 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.04 x 10-27 | 391 | 142 | 380 | 131 | 73.36% | 25.64% | 533 | 511 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.04e-27' χ2 p-value for Mo17 x B73: '3.23e-28' Biased in favor of strain: 'B73' |
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| GRMZM2G315121 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.86527 x 10-2 | 56 | 17 | 40 | 48 | 76.71% | 54.55% | 73 | 88 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0686527' χ2 p-value for Mo17 x B73: '.0158613' Biased in favor of strain: '' |
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| GRMZM2G314934 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 1 | 0 | 100.00% | 0.00% | 3 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G314934 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 1 | 0 | 100.00% | 0.00% | 1 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G314882 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.999 x 10-4 | 145 | 89 | 108 | 61 | 61.97% | 36.09% | 234 | 169 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002514' χ2 p-value for Mo17 x B73: '.0002999' Biased in favor of strain: 'B73' |
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| GRMZM2G314882 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.9476 x 10-2 | 260 | 94 | 130 | 214 | 73.45% | 62.21% | 354 | 344 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0068131' χ2 p-value for Mo17 x B73: '.079476' Biased in favor of strain: '' |
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| GRMZM2G314769 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.07011 x 10-2 | 3 | 17 | 4 | 11 | 15.00% | 73.33% | 20 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0017451' χ2 p-value for Mo17 x B73: '.0707011' Biased in favor of strain: '' |
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| GRMZM2G314769 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G314712 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G314712 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 14 | 0 | 1 | 0 | 100.00% | 0.00% | 14 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0081512' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G314707 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.170751 x 10-1 | 7 | 9 | 11 | 8 | 43.75% | 42.11% | 16 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6170751' χ2 p-value for Mo17 x B73: '.4912971' Biased in favor of strain: '' |
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| GRMZM2G314707 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 1 | 0 | 1 | 50.00% | 100.00% | 2 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6170692' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G314679 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.2932 x 10-3 | 875 | 752 | 919 | 679 | 53.78% | 42.49% | 1627 | 1598 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0022932' χ2 p-value for Mo17 x B73: '1.93e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G314679 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.342 x 10-4 | 1162 | 688 | 550 | 1408 | 62.81% | 71.91% | 1850 | 1958 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0004342' χ2 p-value for Mo17 x B73: '8.57e-07' Biased in favor of strain: 'Mo17' |
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| GRMZM2G314661 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.015081 x 10-1 | 24 | 16 | 18 | 15 | 60.00% | 45.45% | 40 | 33 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2059032' χ2 p-value for Mo17 x B73: '.6015081' Biased in favor of strain: '' |
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| GRMZM2G314661 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.994744 x 10-1 | 20 | 11 | 25 | 27 | 64.52% | 51.92% | 31 | 52 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7994744' χ2 p-value for Mo17 x B73: '.0241122' Biased in favor of strain: '' |
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| GRMZM2G314660 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.34 x 10-6 | 776 | 576 | 974 | 772 | 57.40% | 44.22% | 1352 | 1746 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.35e-08' χ2 p-value for Mo17 x B73: '1.34e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G314660 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 14 | 6 | 4 | 1 | 70.00% | 20.00% | 20 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7518449' χ2 p-value for Mo17 x B73: '.0268567' Biased in favor of strain: '' |
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| GRMZM2G314656 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.8004 x 10-3 | 52 | 86 | 34 | 75 | 37.68% | 68.81% | 138 | 109 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0038004' χ2 p-value for Mo17 x B73: '.000086' Biased in favor of strain: 'Mo17' |
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| GRMZM2G314656 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.65249 x 10-2 | 30 | 25 | 15 | 68 | 54.55% | 81.93% | 55 | 83 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0565249' χ2 p-value for Mo17 x B73: '.0031842' Biased in favor of strain: '' |
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| GRMZM2G314652 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.155825 x 10-1 | 44 | 45 | 40 | 38 | 49.44% | 48.72% | 89 | 78 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9155825' χ2 p-value for Mo17 x B73: '.8208472' Biased in favor of strain: '' |
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| GRMZM2G314652 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.187579 x 10-1 | 11 | 15 | 17 | 23 | 42.31% | 57.50% | 26 | 40 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0084172' χ2 p-value for Mo17 x B73: '.2187579' Biased in favor of strain: '' |
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| GRMZM2G314647 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 1 | 1 | 2 | 75.00% | 66.67% | 4 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
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| GRMZM2G314647 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 1 | 0 | 0.00% | 0.00% | 1 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G314582 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 10 | 3 | 6 | 0 | 76.92% | 0.00% | 13 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0522036' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
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| GRMZM2G314582 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G314563 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.996423 x 10-1 | 164 | 152 | 104 | 59 | 51.90% | 36.20% | 316 | 163 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4996423' χ2 p-value for Mo17 x B73: '.000424' Biased in favor of strain: '' |
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| GRMZM2G314563 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.572994 x 10-1 | 85 | 29 | 33 | 88 | 74.56% | 72.73% | 114 | 121 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0737641' χ2 p-value for Mo17 x B73: '.1572994' Biased in favor of strain: '' |
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| GRMZM2G314546 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.07464 x 10-2 | 241 | 170 | 209 | 160 | 58.64% | 43.36% | 411 | 369 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0004615' χ2 p-value for Mo17 x B73: '.0107464' Biased in favor of strain: 'B73' |
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| GRMZM2G314546 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.20671 x 10-1 | 215 | 58 | 132 | 231 | 78.75% | 63.64% | 273 | 363 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000227' χ2 p-value for Mo17 x B73: '.220671' Biased in favor of strain: '' |
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| GRMZM2G314520 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.47 x 10-9 | 84 | 20 | 68 | 14 | 80.77% | 17.07% | 104 | 82 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.48e-10' χ2 p-value for Mo17 x B73: '2.47e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G314520 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.658064 x 10-1 | 41 | 13 | 19 | 25 | 75.93% | 56.82% | 54 | 44 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1489231' χ2 p-value for Mo17 x B73: '.1658064' Biased in favor of strain: '' |
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| GRMZM2G314064 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.129969 x 10-1 | 213 | 187 | 183 | 199 | 53.25% | 52.09% | 400 | 382 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.193601' χ2 p-value for Mo17 x B73: '.4129969' Biased in favor of strain: '' |
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| GRMZM2G314064 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G313944 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 1 | 0 | 100.00% | 0.00% | 1 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G313944 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 3 | 2 | 100.00% | 40.00% | 4 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.2059032' Biased in favor of strain: '' |
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| GRMZM2G313867 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.03 x 10-8 | 935 | 703 | 813 | 602 | 57.08% | 42.54% | 1638 | 1415 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.91e-09' χ2 p-value for Mo17 x B73: '2.03e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G313867 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.5949 x 10-3 | 264 | 90 | 165 | 238 | 74.58% | 59.06% | 354 | 403 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0015949' χ2 p-value for Mo17 x B73: '.0011929' Biased in favor of strain: 'B73' |
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| GRMZM2G313761 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 2 | 2 | 7 | 50.00% | 77.78% | 4 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.0955807' Biased in favor of strain: '' |
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| GRMZM2G313761 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 6 | 2 | 12 | 0.00% | 85.71% | 6 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000532' χ2 p-value for Mo17 x B73: '.1305701' Biased in favor of strain: '' |
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| GRMZM2G313750 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 0 | 7 | 0 | 100.00% | 0.00% | 6 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0143059' χ2 p-value for Mo17 x B73: '.008151' Biased in favor of strain: '' |
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| GRMZM2G313750 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 4 | 0 | 100.00% | 0.00% | 5 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1138475' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: '' |
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| GRMZM2G313678 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 2 | 13 | 1 | 33.33% | 7.14% | 3 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.0013406' Biased in favor of strain: '' |
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| GRMZM2G313678 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 1 | 0 | 3 | 75.00% | 100.00% | 4 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7236798' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: '' |
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| GRMZM2G313672 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.3656 x 10-3 | 495 | 383 | 453 | 366 | 56.38% | 44.69% | 878 | 819 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001569' χ2 p-value for Mo17 x B73: '.0023656' Biased in favor of strain: 'B73' |
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| GRMZM2G313672 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.7618 x 10-3 | 566 | 229 | 379 | 540 | 71.19% | 58.76% | 795 | 919 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0067618' χ2 p-value for Mo17 x B73: '3.68e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G313656 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.797125 x 10-1 | 13 | 7 | 15 | 4 | 65.00% | 21.05% | 20 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1797125' χ2 p-value for Mo17 x B73: '.0116169' Biased in favor of strain: '' |
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| GRMZM2G313656 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 3 | 4 | 100.00% | 57.14% | 4 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.59298' Biased in favor of strain: '' |
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| GRMZM2G313643 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.36377 x 10-2 | 487 | 413 | 618 | 534 | 54.11% | 46.35% | 900 | 1152 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0136377' χ2 p-value for Mo17 x B73: '.0133283' Biased in favor of strain: 'B73' |
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| GRMZM2G313643 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 10 | 3 | 1 | 4 | 76.92% | 80.00% | 13 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4327761' χ2 p-value for Mo17 x B73: '.5270893' Biased in favor of strain: '' |
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| GRMZM2G313553 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.252529 x 10-1 | 146 | 126 | 85 | 64 | 53.68% | 42.95% | 272 | 149 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2252529' χ2 p-value for Mo17 x B73: '.0853621' Biased in favor of strain: '' |
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| GRMZM2G313553 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.341 x 10-3 | 226 | 72 | 86 | 117 | 75.84% | 57.64% | 298 | 203 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0007829' χ2 p-value for Mo17 x B73: '.006341' Biased in favor of strain: 'B73' |
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| GRMZM2G313481 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 1 | 3 | 4 | 83.33% | 57.14% | 6 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1024704' χ2 p-value for Mo17 x B73: '.705457' Biased in favor of strain: '' |
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| GRMZM2G313481 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 2 | 2 | 16 | 66.67% | 88.89% | 6 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9999887' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G313460 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.14 x 10-11 | 374 | 163 | 297 | 153 | 69.65% | 34.00% | 537 | 450 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.60e-20' χ2 p-value for Mo17 x B73: '1.14e-11' Biased in favor of strain: 'B73' |
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| GRMZM2G313460 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.05729 x 10-2 | 415 | 164 | 279 | 321 | 71.68% | 53.50% | 579 | 600 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0105729' χ2 p-value for Mo17 x B73: '7.83e-12' Biased in favor of strain: '' |
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| GRMZM2G313341 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.15585 x 10-2 | 66 | 40 | 55 | 22 | 62.26% | 28.57% | 106 | 77 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0115585' χ2 p-value for Mo17 x B73: '.0001694' Biased in favor of strain: 'B73' |
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| GRMZM2G313341 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.547287 x 10-1 | 189 | 41 | 69 | 111 | 82.17% | 61.67% | 230 | 180 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.07e-07' χ2 p-value for Mo17 x B73: '.1547287' Biased in favor of strain: '' |
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| GRMZM2G313162 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.630246 x 10-1 | 15 | 12 | 6 | 5 | 55.56% | 45.45% | 27 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.7630246' Biased in favor of strain: '' |
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| GRMZM2G313162 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 0 | 5 | 1 | 100.00% | 16.67% | 6 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832656' χ2 p-value for Mo17 x B73: '.0093748' Biased in favor of strain: '' |
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| GRMZM2G313101 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.614565 x 10-1 | 477 | 345 | 321 | 310 | 58.03% | 49.13% | 822 | 631 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.14e-06' χ2 p-value for Mo17 x B73: '.6614565' Biased in favor of strain: '' |
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| GRMZM2G313101 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.556621 x 10-1 | 612 | 326 | 296 | 640 | 65.25% | 68.38% | 938 | 936 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3556621' χ2 p-value for Mo17 x B73: '.2672581' Biased in favor of strain: '' |
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| GRMZM2G313020 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 4 | 1 | 100.00% | 20.00% | 1 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.1797125' Biased in favor of strain: '' |
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| GRMZM2G313020 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 2 | 0 | 100.00% | 0.00% | 2 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: '' |
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| GRMZM2G313009 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.0581 x 10-3 | 152 | 87 | 116 | 79 | 63.60% | 40.51% | 239 | 195 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000262' χ2 p-value for Mo17 x B73: '.0080581' Biased in favor of strain: 'B73' |
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| GRMZM2G313009 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.3 x 10-5 | 330 | 101 | 171 | 176 | 76.57% | 50.72% | 431 | 347 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000013' χ2 p-value for Mo17 x B73: '2.95e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G312974 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 2 | 4 | 100.00% | 66.67% | 2 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.4142162' Biased in favor of strain: '' |
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| GRMZM2G312974 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 4 | 4 | 100.00% | 50.00% | 1 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.3173104' Biased in favor of strain: '' |
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| GRMZM2G312970 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.94 x 10-12 | 502 | 301 | 413 | 238 | 62.52% | 36.56% | 803 | 651 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.31e-12' χ2 p-value for Mo17 x B73: '6.94e-12' Biased in favor of strain: 'B73' |
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| GRMZM2G312970 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 2.23 x 10-5 | 718 | 462 | 379 | 562 | 60.85% | 59.72% | 1180 | 941 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000223' χ2 p-value for Mo17 x B73: '6.24e-06' Biased in favor of strain: '' |
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| GRMZM2G312939 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G312939 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 30 | 0 | 0 | 1 | 100.00% | 100.00% | 30 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001075' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G312910 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.07194 x 10-2 | 218 | 167 | 178 | 133 | 56.62% | 42.77% | 385 | 311 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0093441' χ2 p-value for Mo17 x B73: '.0107194' Biased in favor of strain: 'B73' |
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| GRMZM2G312910 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.20175 x 10-2 | 328 | 205 | 318 | 430 | 61.54% | 57.49% | 533 | 748 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0120175' χ2 p-value for Mo17 x B73: '1.00e-07' Biased in favor of strain: '' |
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| GRMZM2G312877 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.9108 x 10-3 | 131 | 14 | 77 | 43 | 90.34% | 35.83% | 145 | 120 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.57e-22' χ2 p-value for Mo17 x B73: '.0019108' Biased in favor of strain: 'B73' |
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| GRMZM2G312877 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 2316 | 209 | 793 | 183 | 91.72% | 18.75% | 2525 | 976 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G312871 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.053805 x 10-1 | 8 | 5 | 4 | 9 | 61.54% | 69.23% | 13 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4053805' χ2 p-value for Mo17 x B73: '.1655179' Biased in favor of strain: '' |
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| GRMZM2G312871 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 5 | 5 | 6 | 16.67% | 54.55% | 6 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0093742' χ2 p-value for Mo17 x B73: '.3937685' Biased in favor of strain: '' |
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| GRMZM2G312839 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.89 x 10-10 | 217 | 107 | 226 | 73 | 66.98% | 24.41% | 324 | 299 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.89e-10' χ2 p-value for Mo17 x B73: '8.89e-19' Biased in favor of strain: 'B73' |
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| GRMZM2G312839 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 2.4365 x 10-3 | 9 | 15 | 26 | 10 | 37.50% | 27.78% | 24 | 36 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0024365' χ2 p-value for Mo17 x B73: '7.43e-07' Biased in favor of strain: '' |
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| GRMZM2G312806 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.136267 x 10-1 | 43 | 42 | 29 | 37 | 50.59% | 56.06% | 85 | 66 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9136267' χ2 p-value for Mo17 x B73: '.3247558' Biased in favor of strain: '' |
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| GRMZM2G312806 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.561 x 10-4 | 34 | 40 | 14 | 118 | 45.95% | 89.39% | 74 | 132 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001561' χ2 p-value for Mo17 x B73: '3.04e-08' Biased in favor of strain: 'Mo17' |
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| GRMZM2G312736 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.304939 x 10-1 | 80 | 65 | 109 | 92 | 55.17% | 45.77% | 145 | 201 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2128811' χ2 p-value for Mo17 x B73: '.2304939' Biased in favor of strain: '' |
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| GRMZM2G312736 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.33 x 10-5 | 46 | 3 | 21 | 10 | 93.88% | 32.26% | 49 | 31 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000533' χ2 p-value for Mo17 x B73: '.0000482' Biased in favor of strain: 'B73' |
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| GRMZM2G312732 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.86 x 10-17 | 724 | 438 | 921 | 471 | 62.31% | 33.84% | 1162 | 1392 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.86e-17' χ2 p-value for Mo17 x B73: '1.69e-33' Biased in favor of strain: 'B73' |
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| GRMZM2G312732 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.27 x 10-13 | 156 | 11 | 102 | 45 | 93.41% | 30.61% | 167 | 147 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.27e-13' χ2 p-value for Mo17 x B73: '1.81e-20' Biased in favor of strain: 'B73' |
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| GRMZM2G312661 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 513 | 100 | 299 | 51 | 83.69% | 14.57% | 613 | 350 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G312661 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.6779 x 10-3 | 16 | 0 | 41 | 1 | 100.00% | 2.38% | 16 | 42 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046779' χ2 p-value for Mo17 x B73: '9.76e-19' Biased in favor of strain: 'B73' |
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| GRMZM2G312521 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.024698 x 10-1 | 301 | 156 | 168 | 153 | 65.86% | 47.66% | 457 | 321 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.18e-11' χ2 p-value for Mo17 x B73: '.4024698' Biased in favor of strain: '' |
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| GRMZM2G312521 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.1 x 10-13 | 1582 | 506 | 588 | 796 | 75.77% | 57.51% | 2088 | 1384 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.14e-18' χ2 p-value for Mo17 x B73: '5.10e-13' Biased in favor of strain: 'B73' |
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| GRMZM2G312501 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.332012 x 10-1 | 182 | 164 | 130 | 164 | 52.60% | 55.78% | 346 | 294 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3332012' χ2 p-value for Mo17 x B73: '.0473763' Biased in favor of strain: '' |
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| GRMZM2G312501 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.038049 x 10-1 | 263 | 141 | 176 | 301 | 65.10% | 63.10% | 404 | 477 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5038049' χ2 p-value for Mo17 x B73: '.0987004' Biased in favor of strain: '' |
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| GRMZM2G312438 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.33763 x 10-2 | 39 | 20 | 52 | 20 | 66.10% | 27.78% | 59 | 72 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0133763' χ2 p-value for Mo17 x B73: '.0001624' Biased in favor of strain: 'B73' |
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| GRMZM2G312438 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.83329 x 10-2 | 36 | 7 | 30 | 35 | 83.72% | 53.85% | 43 | 65 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0176778' χ2 p-value for Mo17 x B73: '.0283329' Biased in favor of strain: '' |
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| GRMZM2G312434 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.408072 x 10-1 | 62 | 69 | 47 | 68 | 47.33% | 59.13% | 131 | 115 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5408072' χ2 p-value for Mo17 x B73: '.0501995' Biased in favor of strain: '' |
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| GRMZM2G312434 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.239032 x 10-1 | 33 | 19 | 10 | 44 | 63.46% | 81.48% | 52 | 54 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6239032' χ2 p-value for Mo17 x B73: '.0209214' Biased in favor of strain: '' |
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| GRMZM2G312419 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.0 x 10-16 | 282 | 58 | 236 | 88 | 82.94% | 27.16% | 340 | 324 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.87e-34' χ2 p-value for Mo17 x B73: '2.00e-16' Biased in favor of strain: 'B73' |
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| GRMZM2G312419 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.114968 x 10-1 | 21 | 8 | 48 | 7 | 72.41% | 12.73% | 29 | 55 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5114968' χ2 p-value for Mo17 x B73: '2.14e-17' Biased in favor of strain: '' |
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| GRMZM2G312365 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.86 x 10-12 | 1034 | 637 | 756 | 511 | 61.88% | 40.33% | 1671 | 1267 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.68e-22' χ2 p-value for Mo17 x B73: '5.86e-12' Biased in favor of strain: 'B73' |
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| GRMZM2G312365 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.18 x 10-13 | 1429 | 485 | 805 | 1066 | 74.66% | 56.97% | 1914 | 1871 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.18e-13' χ2 p-value for Mo17 x B73: '5.95e-19' Biased in favor of strain: 'B73' |