Displaying data sets 90201 - 90300 of 169464 in total
Download CSV  
Show/hide fields
All
None
Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G13430 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.68807 x 10-1 63 24 72.41% 87 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13430 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.72117 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.81659 x 10-1 7 1 2 5 87.50% 71.43% 8 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.232494'
Avg. expression score for this sample: '75.4484'
Avg. expression score in LCM sample: '30.8362'
Tissue used: 'pure endosperm, no chalazal'
AT3G13430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.64086 x 10-1 7 4 7 30 63.64% 81.08% 11 37 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.232494'
Avg. expression score for this sample: '88.8219'
Avg. expression score in LCM sample: '30.8362'
Tissue used: 'full endosperm'
AT3G13420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 1 0 100.00% 0.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '5.52563'
Avg. expression score in LCM sample: '11.6261'
Tissue used: 'full endosperm'
AT3G13420 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13420 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '5.98274'
Avg. expression score in LCM sample: '11.6261'
Tissue used: 'pure endosperm, no chalazal'
AT3G13420 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.42857 x 10-1 0 4 0.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13420 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '10.3621'
Avg. embryo expression (LCM): '12.9981'
AT3G13410 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 0 1 0 100.00% 0.00% 2 1 TAIR8 Avg. embryo expression (dissected): '92.1951'
Avg. embryo expression (LCM): '90.158'
AT3G13410 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.88166 x 10-1 39 11 78.00% 50 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 2 1 4 50.00% 80.00% 4 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.072663'
Avg. expression score for this sample: '132.845'
Avg. expression score in LCM sample: '120.288'
Tissue used: 'pure endosperm, no chalazal'
AT3G13410 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.175 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.3858 x 10-2 6 1 2 21 85.71% 91.30% 7 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.072663'
Avg. expression score for this sample: '159.126'
Avg. expression score in LCM sample: '120.288'
Tissue used: 'full endosperm'
AT3G13410 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.70095 x 10-1 32 9 78.05% 41 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13405 MIR169A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13405 MIR169A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13405 MIR169A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G13405 MIR169A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G13405 MIR169A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13405 MIR169A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G13403 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G13403 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13403 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G13403 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13403 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13403 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G13400 sks13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.71812 x 10-1 3 3 16 26 50.00% 61.90% 6 42 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.212255'
Avg. expression score for this sample: '107.713'
Avg. expression score in LCM sample: '19.3866'
Tissue used: 'pure endosperm, no chalazal'
AT3G13400 sks13 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13400 sks13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.81141 x 10-1 7 4 7 0 63.64% 0.00% 11 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.212255'
Avg. expression score for this sample: '22.8675'
Avg. expression score in LCM sample: '19.3866'
Tissue used: 'full endosperm'
AT3G13400 sks13 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1442 x 10-2 0 7 0.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13400 sks13 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 4 3 57.14% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13400 sks13 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.82051 x 10-1 0 1 5 1 0.00% 16.67% 1 6 TAIR8 Avg. embryo expression (dissected): '94.8629'
Avg. embryo expression (LCM): '5.96532'
AT3G13390 sks11 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.94336'
Avg. embryo expression (LCM): '0'
AT3G13390 sks11 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13390 sks11 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13390 sks11 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13390 sks11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '14.319'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G13390 sks11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.25293'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G13380 BRL3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.9 x 10-15 70 6 7 150 92.11% 95.54% 76 157 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.6e-15'
Avg. expression score for this sample: '101.552'
Avg. expression score in LCM sample: '7.23137'
Tissue used: 'full endosperm'
AT3G13380 BRL3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 34 2 94.44% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13380 BRL3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.554 x 10-3 279 3 98.94% 282 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13380 BRL3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.77157 x 10-1 12 2 1 6 85.71% 85.71% 14 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.6e-15'
Avg. expression score for this sample: '16.8183'
Avg. expression score in LCM sample: '7.23137'
Tissue used: 'pure endosperm, no chalazal'
AT3G13380 BRL3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.14338 x 10-1 111 6 94.87% 117 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13380 BRL3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.00323 x 10-1 3 3 0 5 50.00% 100.00% 6 5 TAIR8 Avg. embryo expression (dissected): '13.8464'
Avg. embryo expression (LCM): '8.81612'
AT3G13370 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G13370 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.9208 x 10-2 1052 264 79.94% 1316 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 3 0 1 25.00% 100.00% 4 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.27237'
Avg. expression score in LCM sample: '5.18836'
Tissue used: 'pure endosperm, no chalazal'
AT3G13370 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.295279'
Avg. expression score in LCM sample: '5.18836'
Tissue used: 'full endosperm'
AT3G13370 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 377 394 48.90% 771 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13360 WIP3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.03111 x 10-1 51 14 78.46% 65 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13360 WIP3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13360 WIP3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.13982 x 10-1 3 1 3 12 75.00% 80.00% 4 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.057402'
Avg. expression score for this sample: '540.735'
Avg. expression score in LCM sample: '137.764'
Tissue used: 'pure endosperm, no chalazal'
AT3G13360 WIP3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.137 x 10-2 14 1 5 22 93.33% 81.48% 15 27 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.057402'
Avg. expression score for this sample: '809.573'
Avg. expression score in LCM sample: '137.764'
Tissue used: 'full endosperm'
AT3G13360 WIP3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.1856 x 10-2 63 27 70.00% 90 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13360 WIP3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 8 12 0 2 40.00% 100.00% 20 2 TAIR8 Avg. embryo expression (dissected): '616.355'
Avg. embryo expression (LCM): '304.985'
AT3G13350 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.4198 x 10-1 63 94 27 26 40.13% 49.06% 157 53 TAIR8 Avg. embryo expression (dissected): '164.57'
Avg. embryo expression (LCM): '264.433'
AT3G13350 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.3717 x 10-1 176 45 79.64% 221 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.949 x 10-3 102 41 42 159 71.33% 79.10% 143 201 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.005521'
Avg. expression score for this sample: '138.345'
Avg. expression score in LCM sample: '64.8766'
Tissue used: 'full endosperm'
AT3G13350 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.01376 x 10-1 58 11 84.06% 69 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13350 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.75942 x 10-1 115 46 71.43% 161 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.4304 x 10-1 44 28 30 107 61.11% 78.10% 72 137 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.005521'
Avg. expression score for this sample: '94.3757'
Avg. expression score in LCM sample: '64.8766'
Tissue used: 'pure endosperm, no chalazal'
AT3G13340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.098 x 10-2 25 7 6 32 78.12% 84.21% 32 38 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.270886'
Avg. expression score for this sample: '430.106'
Avg. expression score in LCM sample: '97.7411'
Tissue used: 'pure endosperm, no chalazal'
AT3G13340 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.09721 x 10-1 7 4 63.64% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 25 21 20 58 54.35% 74.36% 46 78 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.270886'
Avg. expression score for this sample: '339.135'
Avg. expression score in LCM sample: '97.7411'
Tissue used: 'full endosperm'
AT3G13340 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.6734 x 10-2 31 5 86.11% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13340 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.1016 x 10-2 23 1 95.83% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13340 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.68097 x 10-1 23 23 3 12 50.00% 80.00% 46 15 TAIR8 Avg. embryo expression (dissected): '434.664'
Avg. embryo expression (LCM): '365.392'
AT3G13335 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G13335 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13335 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13335 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13335 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G13335 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G13330 PA200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.32391 x 10-1 9 1 1 11 90.00% 91.67% 10 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.040215'
Avg. expression score for this sample: '145.612'
Avg. expression score in LCM sample: '113.424'
Tissue used: 'full endosperm'
AT3G13330 PA200 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.18846 x 10-1 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13330 PA200 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.79934 x 10-1 9 2 81.82% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13330 PA200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.040215'
Avg. expression score for this sample: '90.519'
Avg. expression score in LCM sample: '113.424'
Tissue used: 'pure endosperm, no chalazal'
AT3G13330 PA200 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 14 1 93.33% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13330 PA200 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '90.801'
Avg. embryo expression (LCM): '84.2681'
AT3G13320 CAX2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '73.5768'
Avg. embryo expression (LCM): '48.2752'
AT3G13320 CAX2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13320 CAX2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '65.5178'
Avg. expression score in LCM sample: '27.2058'
Tissue used: 'pure endosperm, no chalazal'
AT3G13320 CAX2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13320 CAX2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '262.662'
Avg. expression score in LCM sample: '27.2058'
Tissue used: 'full endosperm'
AT3G13320 CAX2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13310 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.58 x 10-3 23 0 100.00% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13310 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 6 2 75.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.8084 x 10-1 8 1 5 12 88.89% 70.59% 9 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.273283'
Avg. expression score for this sample: '41.3526'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G13310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.66634 x 10-1 25 12 7 28 67.57% 80.00% 37 35 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.273283'
Avg. expression score for this sample: '64.9963'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G13310 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.5361 x 10-2 11 0 100.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13310 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.28308 x 10-1 5 3 1 4 62.50% 80.00% 8 5 TAIR8 Avg. embryo expression (dissected): '35.4341'
Avg. embryo expression (LCM): '13.5633'
AT3G13300 VCS embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.363 x 10-3 1596 1147 776 581 58.18% 42.82% 2743 1357 TAIR8 Avg. embryo expression (dissected): '717.591'
Avg. embryo expression (LCM): '236.491'
AT3G13300 VCS endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.4 x 10-6 2321 802 74.32% 3123 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13300 VCS endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.61448 x 10-1 2642 861 1527 2376 75.42% 60.88% 3503 3903 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.3e-08'
Avg. expression score for this sample: '764.048'
Avg. expression score in LCM sample: '328.734'
Tissue used: 'pure endosperm, no chalazal'
AT3G13300 VCS endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.9 x 10-13 1596 491 541 1370 76.47% 71.69% 2087 1911 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.3e-08'
Avg. expression score for this sample: '426.928'
Avg. expression score in LCM sample: '328.734'
Tissue used: 'full endosperm'
AT3G13300 VCS endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.46 x 10-4 432 133 76.46% 565 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13300 VCS endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 3297 467 87.59% 3764 TAIR8 Mutant effect: 'N/A (not a MEG)'