Displaying data sets 90101 - 90200 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G13550 FUS9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '63.7549'
Avg. expression score in LCM sample: '39.7285'
Tissue used: 'full endosperm'
AT3G13550 FUS9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '59.1927'
Avg. expression score in LCM sample: '39.7285'
Tissue used: 'pure endosperm, no chalazal'
AT3G13540 MYB5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '193.523'
Avg. expression score in LCM sample: '19.1955'
Tissue used: 'pure endosperm, no chalazal'
AT3G13540 MYB5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13540 MYB5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13540 MYB5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13540 MYB5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '15.1038'
Avg. embryo expression (LCM): '1.16795'
AT3G13540 MYB5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '583.352'
Avg. expression score in LCM sample: '19.1955'
Tissue used: 'full endosperm'
AT3G13530 MAPKKK7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.2 x 10-7 90 11 8 72 89.11% 90.00% 101 80 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.1e-09'
Avg. expression score for this sample: '142.167'
Avg. expression score in LCM sample: '33.6141'
Tissue used: 'full endosperm'
AT3G13530 MAPKKK7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.6921 x 10-2 21 3 3 25 87.50% 89.29% 24 28 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.1e-09'
Avg. expression score for this sample: '72.1057'
Avg. expression score in LCM sample: '33.6141'
Tissue used: 'pure endosperm, no chalazal'
AT3G13530 MAPKKK7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 8 8 3 4 50.00% 57.14% 16 7 TAIR8 Avg. embryo expression (dissected): '57.9858'
Avg. embryo expression (LCM): '28.4326'
AT3G13530 MAPKKK7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.704 x 10-3 71 22 76.34% 93 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13530 MAPKKK7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.2937 x 10-2 221 11 95.26% 232 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13530 MAPKKK7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.9022 x 10-2 48 1 97.96% 49 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13525 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13525 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13525 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3.41554'
Avg. embryo expression (LCM): '0'
AT3G13525 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13525 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G13525 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G13520 AGP12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1328.11'
Avg. expression score in LCM sample: '125.579'
Tissue used: 'pure endosperm, no chalazal'
AT3G13520 AGP12 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13520 AGP12 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13520 AGP12 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13520 AGP12 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1470.08'
Avg. embryo expression (LCM): '558.43'
AT3G13520 AGP12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1700.63'
Avg. expression score in LCM sample: '125.579'
Tissue used: 'full endosperm'
AT3G13510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.79757 x 10-1 303 176 186 382 63.26% 67.25% 479 568 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.479432'
Avg. expression score for this sample: '460.052'
Avg. expression score in LCM sample: '204.154'
Tissue used: 'full endosperm'
AT3G13510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.08017 x 10-1 153 65 73 106 70.18% 59.22% 218 179 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.479432'
Avg. expression score for this sample: '353.843'
Avg. expression score in LCM sample: '204.154'
Tissue used: 'pure endosperm, no chalazal'
AT3G13510 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 114 96 36 19 54.29% 34.55% 210 55 TAIR8 Avg. embryo expression (dissected): '283.685'
Avg. embryo expression (LCM): '325.493'
AT3G13510 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.3968 x 10-2 7 12 36.84% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13510 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.277 x 10-3 60 14 81.08% 74 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13510 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.43788 x 10-1 75 32 70.09% 107 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13500 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13500 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13500 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3.49785'
Avg. embryo expression (LCM): '0'
AT3G13500 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.0136'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G13500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.772334'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G13490 OVA5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.0983 x 10-2 80 40 50 46 66.67% 47.92% 120 96 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.039648'
Avg. expression score for this sample: '64.1061'
Avg. expression score in LCM sample: '28.3082'
Tissue used: 'pure endosperm, no chalazal'
AT3G13490 OVA5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.5 x 10-10 181 13 93.30% 194 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13490 OVA5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 154 58 72.64% 212 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13490 OVA5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.75218 x 10-1 40 16 71.43% 56 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13490 OVA5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.4059 x 10-1 140 120 61 38 53.85% 38.38% 260 99 TAIR8 Avg. embryo expression (dissected): '175.78'
Avg. embryo expression (LCM): '134.239'
AT3G13490 OVA5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.3 x 10-6 115 12 45 150 90.55% 76.92% 127 195 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.039648'
Avg. expression score for this sample: '56.2356'
Avg. expression score in LCM sample: '28.3082'
Tissue used: 'full endosperm'
AT3G13480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.99146 x 10-1 68 8 37 29 89.47% 43.94% 76 66 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.741132'
Avg. expression score for this sample: '275.108'
Avg. expression score in LCM sample: '49.679'
Tissue used: 'full endosperm'
AT3G13480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 29 1 13 3 96.67% 18.75% 30 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.741132'
Avg. expression score for this sample: '148.685'
Avg. expression score in LCM sample: '49.679'
Tissue used: 'pure endosperm, no chalazal'
AT3G13480 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.72493 x 10-1 43 13 20 4 76.79% 16.67% 56 24 TAIR8 Avg. embryo expression (dissected): '369.86'
Avg. embryo expression (LCM): '155.149'
AT3G13480 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.41939 x 10-1 31 9 77.50% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13480 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1 x 10-4 54 4 93.10% 58 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13480 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.994 x 10-3 1 6 14.29% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13470 Cpn60beta2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.243 x 10-3 164 42 79.61% 206 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13470 Cpn60beta2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.8328 x 10-2 392 134 74.52% 526 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13470 Cpn60beta2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.5878 x 10-1 1224 1344 510 579 47.66% 53.17% 2568 1089 TAIR8 Avg. embryo expression (dissected): '2522.84'
Avg. embryo expression (LCM): '1670.72'
AT3G13470 Cpn60beta2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.56 x 10-4 381 108 77.91% 489 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13470 Cpn60beta2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.348 x 10-3 272 127 121 406 68.17% 77.04% 399 527 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002955'
Avg. expression score for this sample: '301.051'
Avg. expression score in LCM sample: '195.085'
Tissue used: 'full endosperm'
AT3G13470 Cpn60beta2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.23238 x 10-1 654 412 250 813 61.35% 76.48% 1066 1063 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002955'
Avg. expression score for this sample: '795.745'
Avg. expression score in LCM sample: '195.085'
Tissue used: 'pure endosperm, no chalazal'
AT3G13460 ECT2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.4073 19 5 9 23 79.17% 71.88% 24 32 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.005116'
Avg. expression score for this sample: '569.233'
Avg. expression score in LCM sample: '423.976'
Tissue used: 'pure endosperm, no chalazal'
AT3G13460 ECT2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.5539 x 10-2 303 74 80.37% 377 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13460 ECT2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.50568 x 10-1 393 124 76.02% 517 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13460 ECT2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.88459 x 10-1 34 9 79.07% 43 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13460 ECT2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 47 43 8 5 52.22% 38.46% 90 13 TAIR8 Avg. embryo expression (dissected): '1075.69'
Avg. embryo expression (LCM): '1182.53'
AT3G13460 ECT2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.094 x 10-3 200 56 91 217 78.12% 70.45% 256 308 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.005116'
Avg. expression score for this sample: '680.673'
Avg. expression score in LCM sample: '423.976'
Tissue used: 'full endosperm'
AT3G13450 DIN4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.2415 x 10-2 105 50 30 124 67.74% 80.52% 155 154 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.947759'
Avg. expression score for this sample: '96.2537'
Avg. expression score in LCM sample: '80.6916'
Tissue used: 'full endosperm'
AT3G13450 DIN4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.781 x 10-2 50 67 26 74 42.74% 74.00% 117 100 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.947759'
Avg. expression score for this sample: '130.286'
Avg. expression score in LCM sample: '80.6916'
Tissue used: 'pure endosperm, no chalazal'
AT3G13450 DIN4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.4304 x 10-1 62 108 29 41 36.47% 58.57% 170 70 TAIR8 Avg. embryo expression (dissected): '222.659'
Avg. embryo expression (LCM): '123.903'
AT3G13450 DIN4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.3786 x 10-2 91 24 79.13% 115 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13450 DIN4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.0 x 10-12 143 11 92.86% 154 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13450 DIN4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.2045 x 10-2 39 8 82.98% 47 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13445 TBP1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13445 TBP1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.612 x 10-3 22 1 95.65% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13445 TBP1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.00323 x 10-1 5 3 0 3 62.50% 100.00% 8 3 TAIR8 Avg. embryo expression (dissected): '10.8197'
Avg. embryo expression (LCM): '8.28866'
AT3G13445 TBP1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.37154 x 10-1 11 9 55.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13445 TBP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 16 11 6 15 59.26% 71.43% 27 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '22.5089'
Avg. expression score in LCM sample: '8.4807'
Tissue used: 'full endosperm'
AT3G13445 TBP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 3 1 4 57.14% 80.00% 7 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '9.78795'
Avg. expression score in LCM sample: '8.4807'
Tissue used: 'pure endosperm, no chalazal'
AT3G13440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.9287 x 10-1 35 19 24 44 64.81% 64.71% 54 68 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.471123'
Avg. expression score for this sample: '122.392'
Avg. expression score in LCM sample: '36.6713'
Tissue used: 'pure endosperm, no chalazal'
AT3G13440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.12563 x 10-1 24 12 10 50 66.67% 83.33% 36 60 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.471123'
Avg. expression score for this sample: '68.8172'
Avg. expression score in LCM sample: '36.6713'
Tissue used: 'full endosperm'
AT3G13440 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.004 x 10-3 75 10 88.24% 85 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13440 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.4547 x 10-2 90 21 81.08% 111 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13440 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.24797 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13440 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.78821 x 10-1 31 30 15 10 50.82% 40.00% 61 25 TAIR8 Avg. embryo expression (dissected): '185.6'
Avg. embryo expression (LCM): '90.3213'
AT3G13437 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G13437 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13437 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13437 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13437 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.35476'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G13437 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G13435 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G13435 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G13435 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13435 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13435 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G13435 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13432 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13432 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13432 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G13432 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G13432 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.9046'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G13432 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G13430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.81659 x 10-1 7 1 2 5 87.50% 71.43% 8 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.232494'
Avg. expression score for this sample: '75.4484'
Avg. expression score in LCM sample: '30.8362'
Tissue used: 'pure endosperm, no chalazal'
AT3G13430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.64086 x 10-1 7 4 7 30 63.64% 81.08% 11 37 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.232494'
Avg. expression score for this sample: '88.8219'
Avg. expression score in LCM sample: '30.8362'
Tissue used: 'full endosperm'