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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G54340 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G54340 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54340 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54340 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.23964'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G54330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G54330 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G54330 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54330 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54330 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G54320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.815726'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G54320 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '.261787'
Avg. embryo expression (LCM): '0'
AT5G54320 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54320 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54320 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54310 AGD5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 3 3 9 57.14% 75.00% 7 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '128.663'
Avg. expression score in LCM sample: '62.5984'
Tissue used: 'pure endosperm, no chalazal'
AT5G54310 AGD5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 17 7 10 19 70.83% 65.52% 24 29 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '209.747'
Avg. expression score in LCM sample: '62.5984'
Tissue used: 'full endosperm'
AT5G54310 AGD5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.40071 x 10-1 5 3 1 5 62.50% 83.33% 8 6 TAIR8 Avg. embryo expression (dissected): '166.045'
Avg. embryo expression (LCM): '83.9541'
AT5G54310 AGD5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54310 AGD5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.86005 x 10-1 50 19 72.46% 69 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54310 AGD5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.7 x 10-6 72 3 96.00% 75 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 14 9 7 15 60.87% 68.18% 23 22 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.461679'
Avg. expression score for this sample: '123.236'
Avg. expression score in LCM sample: '24.7072'
Tissue used: 'pure endosperm, no chalazal'
AT5G54300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.81975 x 10-1 35 22 17 26 61.40% 60.47% 57 43 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.461679'
Avg. expression score for this sample: '68.3816'
Avg. expression score in LCM sample: '24.7072'
Tissue used: 'full endosperm'
AT5G54300 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 4 2 2 42.86% 50.00% 7 4 TAIR8 Avg. embryo expression (dissected): '39.0117'
Avg. embryo expression (LCM): '13.7642'
AT5G54300 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.34658 x 10-1 19 10 65.52% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54300 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 6 3 66.67% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54300 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.9061 x 10-2 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54290 CcdA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.48718 x 10-1 23 3 7 13 88.46% 65.00% 26 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.698519'
Avg. expression score for this sample: '42.8543'
Avg. expression score in LCM sample: '34.9957'
Tissue used: 'pure endosperm, no chalazal'
AT5G54290 CcdA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 28 13 19 32 68.29% 62.75% 41 51 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.698519'
Avg. expression score for this sample: '68.7903'
Avg. expression score in LCM sample: '34.9957'
Tissue used: 'full endosperm'
AT5G54290 CcdA embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.58648 x 10-1 12 12 8 1 50.00% 11.11% 24 9 TAIR8 Avg. embryo expression (dissected): '41.9028'
Avg. embryo expression (LCM): '25.7828'
AT5G54290 CcdA endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.69141 x 10-1 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54290 CcdA endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 35 15 70.00% 50 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54290 CcdA endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3069 x 10-2 43 6 87.76% 49 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54280 ATM2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.92302 x 10-1 46 18 23 45 71.88% 66.18% 64 68 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.228853'
Avg. expression score for this sample: '197.462'
Avg. expression score in LCM sample: '164.514'
Tissue used: 'pure endosperm, no chalazal'
AT5G54280 ATM2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.44502 x 10-1 108 41 72 165 72.48% 69.62% 149 237 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.228853'
Avg. expression score for this sample: '207.772'
Avg. expression score in LCM sample: '164.514'
Tissue used: 'full endosperm'
AT5G54280 ATM2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.60834 x 10-1 63 69 11 5 47.73% 31.25% 132 16 TAIR8 Avg. embryo expression (dissected): '318.025'
Avg. embryo expression (LCM): '216.045'
AT5G54280 ATM2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.7197 x 10-2 29 5 85.29% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54280 ATM2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.1 x 10-12 138 7 95.17% 145 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54280 ATM2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.5 x 10-13 201 15 93.06% 216 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54270 LHCB3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 9 1 6 2 90.00% 25.00% 10 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.704917'
Avg. expression score for this sample: '486.812'
Avg. expression score in LCM sample: '175.434'
Tissue used: 'pure endosperm, no chalazal'
AT5G54270 LHCB3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.21253 x 10-1 14 6 10 13 70.00% 56.52% 20 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.704917'
Avg. expression score for this sample: '521.598'
Avg. expression score in LCM sample: '175.434'
Tissue used: 'full endosperm'
AT5G54270 LHCB3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.7383 x 10-1 20 23 9 5 46.51% 35.71% 43 14 TAIR8 Avg. embryo expression (dissected): '1270.12'
Avg. embryo expression (LCM): '922.741'
AT5G54270 LHCB3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54270 LHCB3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54270 LHCB3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.67317 x 10-1 15 4 78.95% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54260 MRE11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '7.2836'
Avg. expression score in LCM sample: '1.14644'
Tissue used: 'pure endosperm, no chalazal'
AT5G54260 MRE11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 1 0 2 0.00% 100.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '30.9188'
Avg. expression score in LCM sample: '1.14644'
Tissue used: 'full endosperm'
AT5G54260 MRE11 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '15.8457'
Avg. embryo expression (LCM): '18.2099'
AT5G54260 MRE11 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54260 MRE11 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54260 MRE11 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54250 CNGC4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 1 1 100.00% 50.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '89.2902'
Avg. expression score in LCM sample: '58.8652'
Tissue used: 'pure endosperm, no chalazal'
AT5G54250 CNGC4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '33.7824'
Avg. expression score in LCM sample: '58.8652'
Tissue used: 'full endosperm'
AT5G54250 CNGC4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 1 2 0 66.67% 0.00% 3 2 TAIR8 Avg. embryo expression (dissected): '122.352'
Avg. embryo expression (LCM): '32.803'
AT5G54250 CNGC4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54250 CNGC4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54250 CNGC4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.496'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G54240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.875803'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G54240 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.720997'
Avg. embryo expression (LCM): '0'
AT5G54240 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54240 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54240 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54230 MYB49 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.448715'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G54230 MYB49 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.157056'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G54230 MYB49 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.50403'
Avg. embryo expression (LCM): '0'
AT5G54230 MYB49 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54230 MYB49 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54230 MYB49 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54225 LCR83 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G54225 LCR83 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.676634'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G54225 LCR83 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G54225 LCR83 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54225 LCR83 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 228 24 90.48% 252 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54225 LCR83 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 317 118 72.87% 435 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.40186 x 10-1 11 5 16 51 68.75% 76.12% 16 67 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.331246'
Avg. expression score for this sample: '79.4698'
Avg. expression score in LCM sample: '26.7208'
Tissue used: 'pure endosperm, no chalazal'
AT5G54220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.668 x 10-3 1 0 37 25 100.00% 40.32% 1 62 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.331246'
Avg. expression score for this sample: '44.103'
Avg. expression score in LCM sample: '26.7208'
Tissue used: 'full endosperm'
AT5G54220 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 3 0 0 25.00% 4 0 TAIR8 Avg. embryo expression (dissected): '2.63929'
Avg. embryo expression (LCM): '0'
AT5G54220 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54220 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.3651 x 10-2 7083 3136 69.31% 10219 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54220 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.8456 x 10-2 4720 2206 68.15% 6926 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54215 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.12606'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G54215 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 3 100.00% 0 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.00554'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G54215 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G54215 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54215 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 68 16 80.95% 84 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54215 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 27 1 96.43% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G54210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.52829'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G54210 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G54210 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54210 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54210 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.20891 x 10-1 3 2 2 18 60.00% 90.00% 5 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.007309'
Avg. expression score for this sample: '238.698'
Avg. expression score in LCM sample: '85.8799'
Tissue used: 'pure endosperm, no chalazal'
AT5G54200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.3682 x 10-2 28 14 6 60 66.67% 90.91% 42 66 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.007309'
Avg. expression score for this sample: '317.346'
Avg. expression score in LCM sample: '85.8799'
Tissue used: 'full endosperm'
AT5G54200 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.59645 x 10-1 18 18 5 12 50.00% 70.59% 36 17 TAIR8 Avg. embryo expression (dissected): '418.378'
Avg. embryo expression (LCM): '279.968'
AT5G54200 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 15 3 83.33% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54200 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.3 x 10-7 161 2 98.77% 163 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54200 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.38891 x 10-1 145 23 86.31% 168 TAIR8 Mutant effect: 'N/A (not a MEG)'