Displaying data sets 88101 - 88200 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G16390 NSP3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 0 0 0 100.00% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.018404'
Avg. expression score for this sample: '4.9894'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G16390 NSP3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 10 0 100.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16390 NSP3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.0741 x 10-2 9 0 0 5 100.00% 100.00% 9 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.018404'
Avg. expression score for this sample: '5.17241'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G16390 NSP3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 71 0 100.00% 71 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16380 PAB6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 11 2 84.62% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16380 PAB6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.44444 x 10-1 0 0 0 5 100.00% 0 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.641177'
Avg. expression score in LCM sample: '1.82254'
Tissue used: 'full endosperm'
AT3G16380 PAB6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16380 PAB6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16380 PAB6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '.180661'
Avg. embryo expression (LCM): '2.34845'
AT3G16380 PAB6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 2 1 100.00% 33.33% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.645879'
Avg. expression score in LCM sample: '1.82254'
Tissue used: 'pure endosperm, no chalazal'
AT3G16370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.4 x 10-8 88 0 4 11 100.00% 73.33% 88 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.9e-22'
Avg. expression score for this sample: '25.4752'
Avg. expression score in LCM sample: '2.91019'
Tissue used: 'pure endosperm, no chalazal'
AT3G16370 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.441 x 10-3 204 0 100.00% 204 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 x 10-14 115 0 6 62 100.00% 91.18% 115 68 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.9e-22'
Avg. expression score for this sample: '42.0575'
Avg. expression score in LCM sample: '2.91019'
Tissue used: 'full endosperm'
AT3G16370 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 x 10-5 1901 7 99.63% 1908 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16370 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.4349 x 10-2 93 27 35 9 77.50% 20.45% 120 44 TAIR8 Avg. embryo expression (dissected): '63.2933'
Avg. embryo expression (LCM): '33.2049'
AT3G16370 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.68046 x 10-1 47 0 100.00% 47 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16360 AHP4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16360 AHP4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G16360 AHP4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G16360 AHP4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16360 AHP4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G16360 AHP4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16350 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '46.1716'
Avg. expression score in LCM sample: '5.74688'
Tissue used: 'full endosperm'
AT3G16350 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16350 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '13.122'
Avg. embryo expression (LCM): '6.55558'
AT3G16350 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '14.6704'
Avg. expression score in LCM sample: '5.74688'
Tissue used: 'pure endosperm, no chalazal'
AT3G16340 ABCG29 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.023215'
Avg. expression score for this sample: '1.24076'
Avg. expression score in LCM sample: '.338052'
Tissue used: 'pure endosperm, no chalazal'
AT3G16340 ABCG29 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.80649 x 10-1 64 1 98.46% 65 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16340 ABCG29 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.2609 x 10-2 8 0 1 15 100.00% 93.75% 8 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.023215'
Avg. expression score for this sample: '24.0684'
Avg. expression score in LCM sample: '.338052'
Tissue used: 'full endosperm'
AT3G16340 ABCG29 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 20 0 100.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16340 ABCG29 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16340 ABCG29 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 3 0 0 40.00% 5 0 TAIR8 Avg. embryo expression (dissected): '5.28021'
Avg. embryo expression (LCM): '4.29503'
AT3G16330 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G16330 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G16330 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 6 2 75.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G16330 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 30 0 100.00% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16320 CDC27a endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0015 86 30 74.14% 116 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16320 CDC27a endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.25452 x 10-1 7 6 18 20 53.85% 52.63% 13 38 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.088205'
Avg. expression score for this sample: '12.3687'
Avg. expression score in LCM sample: '11.9494'
Tissue used: 'full endosperm'
AT3G16320 CDC27a endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.87421 x 10-1 83 77 51.88% 160 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16320 CDC27a endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.93912 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16320 CDC27a embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 2.44851 x 10-1 9 3 0 0 75.00% 12 0 TAIR8 Avg. embryo expression (dissected): '15.392'
Avg. embryo expression (LCM): '13.4377'
AT3G16320 CDC27a endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.40644 x 10-1 4 6 5 5 40.00% 50.00% 10 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.088205'
Avg. expression score for this sample: '14.9603'
Avg. expression score in LCM sample: '11.9494'
Tissue used: 'pure endosperm, no chalazal'
AT3G16310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '172.539'
Avg. expression score in LCM sample: '93.4493'
Tissue used: 'pure endosperm, no chalazal'
AT3G16310 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '111.979'
Avg. expression score in LCM sample: '93.4493'
Tissue used: 'full endosperm'
AT3G16310 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16310 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '347.301'
Avg. embryo expression (LCM): '349.43'
AT3G16310 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16300 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 5 4 55.56% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16300 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.11874 x 10-1 50 33 29 20 60.24% 40.82% 83 49 TAIR8 Avg. embryo expression (dissected): '791.977'
Avg. embryo expression (LCM): '1121.79'
AT3G16300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.4081 x 10-2 37 34 9 12 52.11% 57.14% 71 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.060411'
Avg. expression score for this sample: '332.784'
Avg. expression score in LCM sample: '447.625'
Tissue used: 'pure endosperm, no chalazal'
AT3G16300 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.48085 x 10-1 14 5 73.68% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.53114 x 10-1 9 10 15 27 47.37% 64.29% 19 42 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.060411'
Avg. expression score for this sample: '168.994'
Avg. expression score in LCM sample: '447.625'
Tissue used: 'full endosperm'
AT3G16300 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16290 EMB2083 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.1 x 10-21 1398 388 78.28% 1786 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16290 EMB2083 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.58 x 10-4 1401 786 675 2027 64.06% 75.02% 2187 2702 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.47511'
Avg. expression score for this sample: '1605.56'
Avg. expression score in LCM sample: '409.881'
Tissue used: 'full endosperm'
AT3G16290 EMB2083 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1793 287 86.20% 2080 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16290 EMB2083 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.7 x 10-9 1313 2025 402 580 39.33% 59.06% 3338 982 TAIR8 Avg. embryo expression (dissected): '4112.8'
Avg. embryo expression (LCM): '2027.46'
AT3G16290 EMB2083 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.52 x 10-4 154 40 79.38% 194 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16290 EMB2083 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.45 x 10-3 867 801 551 1463 51.98% 72.64% 1668 2014 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.47511'
Avg. expression score for this sample: '2164.22'
Avg. expression score in LCM sample: '409.881'
Tissue used: 'pure endosperm, no chalazal'
AT3G16280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '22.8733'
Avg. expression score in LCM sample: '4.82092'
Tissue used: 'pure endosperm, no chalazal'
AT3G16280 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '53.0853'
Avg. expression score in LCM sample: '4.82092'
Tissue used: 'full endosperm'
AT3G16280 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16280 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16280 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '9.77921'
Avg. embryo expression (LCM): '1.36888'
AT3G16270 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.08392 x 10-1 5 1 1 1 83.33% 50.00% 6 2 TAIR8 Avg. embryo expression (dissected): '181.25'
Avg. embryo expression (LCM): '153.453'
AT3G16270 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 2 2 4 0.00% 66.67% 2 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '251.134'
Avg. expression score in LCM sample: '262.196'
Tissue used: 'pure endosperm, no chalazal'
AT3G16270 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.46226 x 10-1 14 3 82.35% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.97226 x 10-1 12 4 6 13 75.00% 68.42% 16 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '345.22'
Avg. expression score in LCM sample: '262.196'
Tissue used: 'full endosperm'
AT3G16270 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.154 x 10-3 24 1 96.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16260 TRZ4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16260 TRZ4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.30769 x 10-1 5 0 0 2 100.00% 100.00% 5 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '41.7157'
Avg. expression score in LCM sample: '25.6038'
Tissue used: 'full endosperm'
AT3G16260 TRZ4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16260 TRZ4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16260 TRZ4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 3 0 2 25.00% 100.00% 4 2 TAIR8 Avg. embryo expression (dissected): '94.9514'
Avg. embryo expression (LCM): '106.836'
AT3G16260 TRZ4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.86131 x 10-1 0 5 0 2 0.00% 100.00% 5 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '35.3152'
Avg. expression score in LCM sample: '25.6038'
Tissue used: 'pure endosperm, no chalazal'
AT3G16250 PnsB3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.37696'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G16250 PnsB3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16250 PnsB3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.790631'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G16250 PnsB3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16250 PnsB3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.37186 x 10-1 3 5 1 0 37.50% 0.00% 8 1 TAIR8 Avg. embryo expression (dissected): '22.2292'
Avg. embryo expression (LCM): '27.654'
AT3G16250 PnsB3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16240 DELTA-TIP endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16240 DELTA-TIP embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.80172 x 10-1 3 5 2 1 37.50% 33.33% 8 3 TAIR8 Avg. embryo expression (dissected): '18.8974'
Avg. embryo expression (LCM): '0'
AT3G16240 DELTA-TIP endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.228113'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G16240 DELTA-TIP endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16240 DELTA-TIP endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.21911'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G16240 DELTA-TIP endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16230 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.194 x 10-3 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 4 2 5 42.86% 71.43% 7 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.105961'
Avg. expression score for this sample: '37.8111'
Avg. expression score in LCM sample: '10.2004'
Tissue used: 'full endosperm'
AT3G16230 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.7489 x 10-2 9 2 81.82% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16230 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 4 5 0 1 44.44% 100.00% 9 1 TAIR8 Avg. embryo expression (dissected): '41.3234'
Avg. embryo expression (LCM): '34.8375'
AT3G16230 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.28346 x 10-1 0 7 3 4 0.00% 57.14% 7 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.105961'
Avg. expression score for this sample: '22.8123'
Avg. expression score in LCM sample: '10.2004'
Tissue used: 'pure endosperm, no chalazal'