Displaying data sets 87801 - 87900 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G16840 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.72004 x 10-1 92 29 76.03% 121 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.81184 x 10-1 45 15 22 41 75.00% 65.08% 60 63 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.150949'
Avg. expression score for this sample: '101.462'
Avg. expression score in LCM sample: '28.8373'
Tissue used: 'pure endosperm, no chalazal'
AT3G16840 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 38 44 11 15 46.34% 57.69% 82 26 TAIR8 Avg. embryo expression (dissected): '166.699'
Avg. embryo expression (LCM): '205.433'
AT3G16840 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.9632 x 10-1 9 1 90.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16830 TPR2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.7484 x 10-2 41 9 82.00% 50 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16830 TPR2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.20723 x 10-1 39 22 34 60 63.93% 63.83% 61 94 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.782709'
Avg. expression score for this sample: '82.8256'
Avg. expression score in LCM sample: '105.56'
Tissue used: 'pure endosperm, no chalazal'
AT3G16830 TPR2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.83468 x 10-1 39 33 14 25 54.17% 64.10% 72 39 TAIR8 Avg. embryo expression (dissected): '93.4728'
Avg. embryo expression (LCM): '61.3486'
AT3G16830 TPR2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.634 x 10-3 144 40 78.26% 184 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16830 TPR2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.98619 x 10-1 87 46 52 137 65.41% 72.49% 133 189 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.782709'
Avg. expression score for this sample: '134.067'
Avg. expression score in LCM sample: '105.56'
Tissue used: 'full endosperm'
AT3G16830 TPR2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 x 10-8 220 34 86.61% 254 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16820 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G16820 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16820 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Avg. embryo expression (dissected): '.791954'
Avg. embryo expression (LCM): '0'
AT3G16820 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.272782'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G16810 PUM24 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 2 0 0 50.00% 4 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '23.5986'
Avg. expression score in LCM sample: '14.8596'
Tissue used: 'pure endosperm, no chalazal'
AT3G16810 PUM24 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 3 1 1 25.00% 50.00% 4 2 TAIR8 Avg. embryo expression (dissected): '74.3328'
Avg. embryo expression (LCM): '145.943'
AT3G16810 PUM24 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16810 PUM24 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.88156 x 10-1 12 4 75.00% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16810 PUM24 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 1 2 3 75.00% 60.00% 4 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '30.1883'
Avg. expression score in LCM sample: '14.8596'
Tissue used: 'full endosperm'
AT3G16810 PUM24 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.89732 x 10-1 15 2 88.24% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16800 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.735979'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G16800 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16800 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.7443'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G16800 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.207372'
Avg. embryo expression (LCM): '.891659'
AT3G16785 PLDP1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '18.6852'
Avg. embryo expression (LCM): '10.7753'
AT3G16785 PLDP1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16785 PLDP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '23.5492'
Avg. expression score in LCM sample: '14.1394'
Tissue used: 'pure endosperm, no chalazal'
AT3G16785 PLDP1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16785 PLDP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '44.4554'
Avg. expression score in LCM sample: '14.1394'
Tissue used: 'full endosperm'
AT3G16785 PLDP1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16780 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.7 x 10-7 1939 738 72.43% 2677 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16780 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.98133 x 10-1 588 342 385 893 63.23% 69.87% 930 1278 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.810724'
Avg. expression score for this sample: '974.62'
Avg. expression score in LCM sample: '559.167'
Tissue used: 'full endosperm'
AT3G16780 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.8 x 10-13 2522 885 74.02% 3407 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16780 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.92121 x 10-1 561 337 252 556 62.47% 68.81% 898 808 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.810724'
Avg. expression score for this sample: '1143.51'
Avg. expression score in LCM sample: '559.167'
Tissue used: 'pure endosperm, no chalazal'
AT3G16780 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.49257 x 10-1 1360 1528 257 327 47.09% 55.99% 2888 584 TAIR8 Avg. embryo expression (dissected): '3390.13'
Avg. embryo expression (LCM): '4080.29'
AT3G16780 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.729 x 10-3 226 81 73.62% 307 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16770 EBP endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 1208 1487 44.82% 2695 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16770 EBP endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.3 x 10-21 21407 1598 8736 2740 93.05% 23.88% 23005 11476 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '12155'
Avg. expression score in LCM sample: '3730.8'
Tissue used: 'pure endosperm, no chalazal'
AT3G16770 EBP embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.6 x 10-29 812 120 235 86 87.12% 26.79% 932 321 TAIR8 Avg. embryo expression (dissected): '637.57'
Avg. embryo expression (LCM): '138.797'
AT3G16770 EBP endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 508 25 95.31% 533 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16770 EBP endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 17106 1293 5313 2608 92.97% 32.93% 18399 7921 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '6558.95'
Avg. expression score in LCM sample: '3730.8'
Tissue used: 'full endosperm'
AT3G16770 EBP endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 2168 18 99.18% 2186 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16760 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1641 149 91.68% 1790 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.0 x 10-8 460 139 211 653 76.79% 75.58% 599 864 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '8.1e-08'
Avg. expression score for this sample: '482.589'
Avg. expression score in LCM sample: '280.671'
Tissue used: 'full endosperm'
AT3G16760 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.35848 x 10-1 1395 436 76.19% 1831 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16760 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.70579 x 10-1 78 52 25 26 60.00% 50.98% 130 51 TAIR8 Avg. embryo expression (dissected): '179.819'
Avg. embryo expression (LCM): '127.683'
AT3G16760 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.4182 x 10-2 114 26 81.43% 140 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.17956 x 10-1 118 46 62 126 71.95% 67.02% 164 188 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '8.1e-08'
Avg. expression score for this sample: '281.088'
Avg. expression score in LCM sample: '280.671'
Tissue used: 'pure endosperm, no chalazal'
AT3G16750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '14.8838'
Avg. expression score in LCM sample: '3.85085'
Tissue used: 'pure endosperm, no chalazal'
AT3G16750 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '36.1094'
Avg. embryo expression (LCM): '31.8109'
AT3G16750 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16750 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '21.5169'
Avg. expression score in LCM sample: '3.85085'
Tissue used: 'full endosperm'
AT3G16750 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16740 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2 x 10-14 392 22 94.69% 414 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.9 x 10-5 70 50 20 214 58.33% 91.45% 120 234 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000828'
Avg. expression score for this sample: '45.211'
Avg. expression score in LCM sample: '29.5281'
Tissue used: 'full endosperm'
AT3G16740 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.9 x 10-9 147 120 55.06% 267 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16740 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.00195 x 10-1 32 4 88.89% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 28 20 19 47 58.33% 71.21% 48 66 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000828'
Avg. expression score for this sample: '24.2442'
Avg. expression score in LCM sample: '29.5281'
Tissue used: 'pure endosperm, no chalazal'
AT3G16740 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.9178 x 10-1 46 39 13 9 54.12% 40.91% 85 22 TAIR8 Avg. embryo expression (dissected): '32.7735'
Avg. embryo expression (LCM): '30.2787'
AT3G16730 HEB2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.34979 x 10-1 38 22 14 6 63.33% 30.00% 60 20 TAIR8 Avg. embryo expression (dissected): '34.215'
Avg. embryo expression (LCM): '42.0587'
AT3G16730 HEB2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.7583 x 10-1 8 1 88.89% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16730 HEB2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.55576 x 10-1 19 3 10 15 86.36% 60.00% 22 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.891797'
Avg. expression score for this sample: '15.3949'
Avg. expression score in LCM sample: '12.0229'
Tissue used: 'pure endosperm, no chalazal'
AT3G16730 HEB2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.67523 x 10-1 50 31 61.73% 81 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16730 HEB2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 16 6 20 34 72.73% 62.96% 22 54 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.891797'
Avg. expression score for this sample: '16.2452'
Avg. expression score in LCM sample: '12.0229'
Tissue used: 'full endosperm'
AT3G16730 HEB2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.854 x 10-2 43 8 84.31% 51 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16720 ATL2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.53087 x 10-1 121 6 95.28% 127 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16720 ATL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.4 x 10-7 44 0 9 74 100.00% 89.16% 44 83 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.5e-08'
Avg. expression score for this sample: '89.9375'
Avg. expression score in LCM sample: '2.1165'
Tissue used: 'full endosperm'
AT3G16720 ATL2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.50424 x 10-1 98 10 90.74% 108 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16720 ATL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.31989 x 10-1 7 1 1 10 87.50% 90.91% 8 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.5e-08'
Avg. expression score for this sample: '32.7641'
Avg. expression score in LCM sample: '2.1165'
Tissue used: 'pure endosperm, no chalazal'
AT3G16720 ATL2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.05707 x 10-1 13 18 0 2 41.94% 100.00% 31 2 TAIR8 Avg. embryo expression (dissected): '47.8968'
Avg. embryo expression (LCM): '7.23374'
AT3G16720 ATL2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.00482 x 10-1 14 0 100.00% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16712 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16712 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '21.6195'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G16712 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '19.6665'
Avg. embryo expression (LCM): '11.6795'
AT3G16712 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16712 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '47.1469'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G16712 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16710 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.56343 x 10-1 20 10 66.67% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.24204 x 10-1 13 9 13 39 59.09% 75.00% 22 52 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.168497'
Avg. expression score for this sample: '73.3663'
Avg. expression score in LCM sample: '20.2684'
Tissue used: 'full endosperm'
AT3G16710 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 20 6 76.92% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16710 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.57862 x 10-1 7 10 2 2 41.18% 50.00% 17 4 TAIR8 Avg. embryo expression (dissected): '61.8074'
Avg. embryo expression (LCM): '35.4529'
AT3G16710 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.54902 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.9387 x 10-2 11 2 1 13 84.62% 92.86% 13 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.168497'
Avg. expression score for this sample: '45.6303'
Avg. expression score in LCM sample: '20.2684'
Tissue used: 'pure endosperm, no chalazal'
AT3G16700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.18189'
Avg. expression score in LCM sample: '3.63039'
Tissue used: 'pure endosperm, no chalazal'
AT3G16700 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '5.36969'
Avg. embryo expression (LCM): '7.74864'
AT3G16700 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16700 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '4.0686'
Avg. expression score in LCM sample: '3.63039'
Tissue used: 'full endosperm'
AT3G16700 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16690 SWEET16 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16690 SWEET16 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G16690 SWEET16 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16690 SWEET16 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G16690 SWEET16 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.268217'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G16690 SWEET16 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'