Displaying data sets 87401 - 87500 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G17450 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.16306 x 10-1 33 12 73.33% 45 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17450 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.62262 x 10-1 110 131 23 28 45.64% 54.90% 241 51 TAIR8 Avg. embryo expression (dissected): '288.365'
Avg. embryo expression (LCM): '118.063'
AT3G17440 NPSN13 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.81489 x 10-1 99 131 11 12 43.04% 52.17% 230 23 TAIR8 Avg. embryo expression (dissected): '402.624'
Avg. embryo expression (LCM): '375.087'
AT3G17440 NPSN13 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.377 x 10-3 135 31 81.33% 166 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17440 NPSN13 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.5 x 10-12 327 45 87.90% 372 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17440 NPSN13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.8 x 10-4 464 262 240 856 63.91% 78.10% 726 1096 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000587'
Avg. expression score for this sample: '627.847'
Avg. expression score in LCM sample: '112.733'
Tissue used: 'full endosperm'
AT3G17440 NPSN13 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.3 x 10-5 239 49 82.99% 288 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17440 NPSN13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.86831 x 10-1 126 89 57 174 58.60% 75.32% 215 231 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000587'
Avg. expression score for this sample: '446.616'
Avg. expression score in LCM sample: '112.733'
Tissue used: 'pure endosperm, no chalazal'
AT3G17430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 2 3 60.00% 0 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.321587'
Avg. expression score for this sample: '52.8762'
Avg. expression score in LCM sample: '28.3082'
Tissue used: 'pure endosperm, no chalazal'
AT3G17430 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17430 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 2 0 0 50.00% 4 0 TAIR8 Avg. embryo expression (dissected): '57.9386'
Avg. embryo expression (LCM): '46.2532'
AT3G17430 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.01 x 10-4 18 0 100.00% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17430 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.6 x 10-6 51 2 96.23% 53 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.24183 x 10-1 5 7 7 10 41.67% 58.82% 12 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.321587'
Avg. expression score for this sample: '75.47'
Avg. expression score in LCM sample: '28.3082'
Tissue used: 'full endosperm'
AT3G17420 GPK1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.7683 x 10-2 4 1 0 13 80.00% 100.00% 5 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.044825'
Avg. expression score for this sample: '198.535'
Avg. expression score in LCM sample: '6.93742'
Tissue used: 'full endosperm'
AT3G17420 GPK1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 47 2 95.92% 49 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17420 GPK1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.44262 x 10-1 40 0 100.00% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17420 GPK1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 1 100.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.044825'
Avg. expression score for this sample: '52.19'
Avg. expression score in LCM sample: '6.93742'
Tissue used: 'pure endosperm, no chalazal'
AT3G17420 GPK1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '21.529'
Avg. embryo expression (LCM): '7.2463'
AT3G17420 GPK1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17410 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.173 x 10-2 122 19 86.52% 141 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17410 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.11861 x 10-1 91 97 24 15 48.40% 38.46% 188 39 TAIR8 Avg. embryo expression (dissected): '181.473'
Avg. embryo expression (LCM): '100.67'
AT3G17410 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.2 x 10-29 680 23 96.73% 703 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.6 x 10-10 196 39 44 235 83.40% 84.23% 235 279 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.6e-08'
Avg. expression score for this sample: '214.646'
Avg. expression score in LCM sample: '54.9114'
Tissue used: 'full endosperm'
AT3G17410 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.3 x 10-26 394 6 98.50% 400 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.23139 x 10-1 121 52 50 131 69.94% 72.38% 173 181 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.6e-08'
Avg. expression score for this sample: '190.55'
Avg. expression score in LCM sample: '54.9114'
Tissue used: 'pure endosperm, no chalazal'
AT3G17400 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G17400 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17400 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17400 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G17400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G17390 MTO3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.4 x 10-7 241 135 180 759 64.10% 80.83% 376 939 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.8e-08'
Avg. expression score for this sample: '1748.34'
Avg. expression score in LCM sample: '721.829'
Tissue used: 'full endosperm'
AT3G17390 MTO3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 835 44 94.99% 879 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17390 MTO3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.6 x 10-7 642 115 84.81% 757 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17390 MTO3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.14691 x 10-1 110 54 18 77 67.07% 81.05% 164 95 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.8e-08'
Avg. expression score for this sample: '1503.24'
Avg. expression score in LCM sample: '721.829'
Tissue used: 'pure endosperm, no chalazal'
AT3G17390 MTO3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.76292 x 10-1 80 19 80.81% 99 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17390 MTO3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.66051 x 10-1 59 72 9 11 45.04% 55.00% 131 20 TAIR8 Avg. embryo expression (dissected): '1450.25'
Avg. embryo expression (LCM): '1445.58'
AT3G17380 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.540133'
Avg. embryo expression (LCM): '0'
AT3G17380 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.477052'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G17380 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.33661'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G17380 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17370 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17370 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G17370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.283587'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G17370 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17370 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G17365 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '29.0378'
Avg. embryo expression (LCM): '25.4437'
AT3G17365 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17365 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '37.9423'
Avg. expression score in LCM sample: '19.3572'
Tissue used: 'full endosperm'
AT3G17365 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17365 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17365 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '25.9763'
Avg. expression score in LCM sample: '19.3572'
Tissue used: 'pure endosperm, no chalazal'
AT3G17360 POK1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.22315 x 10-1 35 15 10 26 70.00% 72.22% 50 36 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '49.1079'
Avg. expression score in LCM sample: '29.0431'
Tissue used: 'pure endosperm, no chalazal'
AT3G17360 POK1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.3982 x 10-2 6 8 42.86% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17360 POK1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.28058 x 10-1 61 20 46 61 75.31% 57.01% 81 107 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '66.9745'
Avg. expression score in LCM sample: '29.0431'
Tissue used: 'full endosperm'
AT3G17360 POK1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.5587 x 10-2 4 6 40.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17360 POK1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 6 3 66.67% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17360 POK1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.36586 x 10-1 65 82 16 13 44.22% 44.83% 147 29 TAIR8 Avg. embryo expression (dissected): '166.27'
Avg. embryo expression (LCM): '112.927'
AT3G17350 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.37688 x 10-1 9 5 1 3 64.29% 75.00% 14 4 TAIR8 Avg. embryo expression (dissected): '66.1244'
Avg. embryo expression (LCM): '85.4988'
AT3G17350 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.203 x 10-3 1 8 11.11% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17350 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.5098 x 10-1 13 4 76.47% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17350 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.7595 x 10-2 4 7 36.36% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.36507 x 10-1 6 3 7 6 66.67% 46.15% 9 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '50.4244'
Avg. expression score in LCM sample: '37.95'
Tissue used: 'pure endosperm, no chalazal'
AT3G17350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.24503 x 10-1 12 1 1 3 92.31% 75.00% 13 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '27.448'
Avg. expression score in LCM sample: '37.95'
Tissue used: 'full endosperm'
AT3G17340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.616 x 10-2 8 5 6 39 61.54% 86.67% 13 45 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.209041'
Avg. expression score for this sample: '34.5877'
Avg. expression score in LCM sample: '19.122'
Tissue used: 'full endosperm'
AT3G17340 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.412 x 10-3 64 6 91.43% 70 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17340 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0111 x 10-2 57 41 58.16% 98 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 7 6 24 36.36% 80.00% 11 30 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.209041'
Avg. expression score for this sample: '29.5069'
Avg. expression score in LCM sample: '19.122'
Tissue used: 'pure endosperm, no chalazal'
AT3G17340 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.5152 x 10-2 4 6 40.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17340 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.12158 x 10-1 22 36 3 2 37.93% 40.00% 58 5 TAIR8 Avg. embryo expression (dissected): '59.6821'
Avg. embryo expression (LCM): '73.857'
AT3G17330 ECT6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.12899 x 10-1 215 255 52 63 45.74% 54.78% 470 115 TAIR8 Avg. embryo expression (dissected): '327.844'
Avg. embryo expression (LCM): '175.368'
AT3G17330 ECT6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.28241 x 10-1 125 48 72.25% 173 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17330 ECT6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.30628 x 10-1 297 158 124 343 65.27% 73.45% 455 467 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.3e-09'
Avg. expression score for this sample: '326.896'
Avg. expression score in LCM sample: '56.9838'
Tissue used: 'pure endosperm, no chalazal'
AT3G17330 ECT6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.1 x 10-27 437 24 94.79% 461 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17330 ECT6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.2 x 10-11 567 175 172 635 76.42% 78.69% 742 807 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.3e-09'
Avg. expression score for this sample: '450.067'
Avg. expression score in LCM sample: '56.9838'
Tissue used: 'full endosperm'
AT3G17330 ECT6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.9 x 10-14 277 22 92.64% 299 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17320 FOA1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17320 FOA1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17320 FOA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.3183'
Avg. expression score in LCM sample: '15.5504'
Tissue used: 'pure endosperm, no chalazal'
AT3G17320 FOA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '5.50437'
Avg. expression score in LCM sample: '15.5504'
Tissue used: 'full endosperm'
AT3G17320 FOA1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17320 FOA1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.708677'
Avg. embryo expression (LCM): '0'
AT3G17310 DRM3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.528 x 10-3 164 93 46 45 63.81% 49.45% 257 91 TAIR8 Avg. embryo expression (dissected): '269.601'
Avg. embryo expression (LCM): '151.657'
AT3G17310 DRM3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.85099 x 10-1 21 16 56.76% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17310 DRM3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.32081 x 10-1 212 68 80 115 75.71% 58.97% 280 195 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.9542'
Avg. expression score for this sample: '164.033'
Avg. expression score in LCM sample: '42.9032'
Tissue used: 'full endosperm'
AT3G17310 DRM3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.164 x 10-3 97 25 79.51% 122 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17310 DRM3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.7601 x 10-2 41 9 82.00% 50 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17310 DRM3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.17835 x 10-1 71 32 49 53 68.93% 51.96% 103 102 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.9542'
Avg. expression score for this sample: '121.106'
Avg. expression score in LCM sample: '42.9032'
Tissue used: 'pure endosperm, no chalazal'
AT3G17300 EMB2786 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '69.9396'
Avg. expression score in LCM sample: '9.877'
Tissue used: 'pure endosperm, no chalazal'
AT3G17300 EMB2786 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17300 EMB2786 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '54.2862'
Avg. expression score in LCM sample: '9.877'
Tissue used: 'full endosperm'
AT3G17300 EMB2786 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17300 EMB2786 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17300 EMB2786 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '71.5022'
Avg. embryo expression (LCM): '71.7597'
AT3G17280 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.3802 x 10-2 2 2 0 11 50.00% 100.00% 4 11 TAIR8 Avg. embryo expression (dissected): '11.8467'
Avg. embryo expression (LCM): '7.57282'
AT3G17280 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.9765 x 10-2 22 0 100.00% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'