Displaying data sets 87101 - 87200 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G17900 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1918 202 90.47% 2120 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17900 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.15808 x 10-1 366 344 158 184 51.55% 53.80% 710 342 TAIR8 Avg. embryo expression (dissected): '265.084'
Avg. embryo expression (LCM): '142.05'
AT3G17890 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.82051 x 10-1 1 6 1 0 14.29% 0.00% 7 1 TAIR8 Avg. embryo expression (dissected): '24.7145'
Avg. embryo expression (LCM): '24.3008'
AT3G17890 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17890 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 4 2 66.67% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17890 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.80115 x 10-1 5 3 1 11 62.50% 91.67% 8 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '16.3072'
Avg. expression score in LCM sample: '4.37998'
Tissue used: 'full endosperm'
AT3G17890 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.53435 x 10-1 2 0 7 0 100.00% 0.00% 2 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '15.3845'
Avg. expression score in LCM sample: '4.37998'
Tissue used: 'pure endosperm, no chalazal'
AT3G17890 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17880 TDX endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.3 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17880 TDX endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 9 1 90.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17880 TDX embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 4.28571 x 10-1 3 0 0 0 100.00% 3 0 TAIR8 Avg. embryo expression (dissected): '75.403'
Avg. embryo expression (LCM): '58.1211'
AT3G17880 TDX endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17880 TDX endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.230769'
Avg. expression score for this sample: '98.6448'
Avg. expression score in LCM sample: '55.661'
Tissue used: 'pure endosperm, no chalazal'
AT3G17880 TDX endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.54545 x 10-1 5 0 0 1 100.00% 100.00% 5 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.230769'
Avg. expression score for this sample: '78.0633'
Avg. expression score in LCM sample: '55.661'
Tissue used: 'full endosperm'
AT3G17860 JAZ3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.0459 x 10-2 23 3 6 31 88.46% 83.78% 26 37 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.010122'
Avg. expression score for this sample: '9.32581'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G17860 JAZ3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 0 1 1 100.00% 50.00% 3 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.010122'
Avg. expression score for this sample: '1.14564'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G17860 JAZ3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.9851 x 10-2 16 9 64.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17860 JAZ3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.88422 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17860 JAZ3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.675 x 10-3 63 35 64.29% 98 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17860 JAZ3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.45455 x 10-1 3 1 0 2 75.00% 100.00% 4 2 TAIR8 Avg. embryo expression (dissected): '1.46905'
Avg. embryo expression (LCM): '4.77226'
AT3G17850 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.17734 x 10-1 99 127 37 34 43.81% 47.89% 226 71 TAIR8 Avg. embryo expression (dissected): '179.103'
Avg. embryo expression (LCM): '106.133'
AT3G17850 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.5322 x 10-2 90 22 80.36% 112 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17850 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 441 11 97.57% 452 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.03488 x 10-1 195 77 81 198 71.69% 70.97% 272 279 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000363'
Avg. expression score for this sample: '200.112'
Avg. expression score in LCM sample: '128.724'
Tissue used: 'pure endosperm, no chalazal'
AT3G17850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.529 x 10-3 278 101 124 356 73.35% 74.17% 379 480 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000363'
Avg. expression score for this sample: '231.252'
Avg. expression score in LCM sample: '128.724'
Tissue used: 'full endosperm'
AT3G17850 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.0536 x 10-2 258 70 78.66% 328 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17845 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17845 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17845 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.37968'
Avg. embryo expression (LCM): '0'
AT3G17845 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17845 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '8.78497'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G17845 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '6.3388'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G17840 RLK902 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '4221.79'
Avg. expression score in LCM sample: '2024.15'
Tissue used: 'pure endosperm, no chalazal'
AT3G17840 RLK902 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3462.45'
Avg. expression score in LCM sample: '2024.15'
Tissue used: 'full endosperm'
AT3G17840 RLK902 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17840 RLK902 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17840 RLK902 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17840 RLK902 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '5822.67'
Avg. embryo expression (LCM): '2704.2'
AT3G17830 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.45455 x 10-1 3 1 0 2 75.00% 100.00% 4 2 TAIR8 Avg. embryo expression (dissected): '59.4571'
Avg. embryo expression (LCM): '44.7211'
AT3G17830 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.63636 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17830 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.06643 x 10-1 3 3 50.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 4 1 2 3 80.00% 60.00% 5 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '19.0088'
Avg. expression score in LCM sample: '4.98259'
Tissue used: 'full endosperm'
AT3G17830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '14.9073'
Avg. expression score in LCM sample: '4.98259'
Tissue used: 'pure endosperm, no chalazal'
AT3G17830 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.43665 x 10-1 4 3 57.14% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17820 GLN1.3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.5956 x 10-2 135 24 84.91% 159 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17820 GLN1.3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.94 x 10-4 525 14 97.40% 539 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17820 GLN1.3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 15 16 10 9 48.39% 47.37% 31 19 TAIR8 Avg. embryo expression (dissected): '369.301'
Avg. embryo expression (LCM): '211.198'
AT3G17820 GLN1.3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.84224 x 10-1 59 2 96.72% 61 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17820 GLN1.3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.6897 x 10-2 33 4 4 20 89.19% 83.33% 37 24 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.4e-16'
Avg. expression score for this sample: '396.924'
Avg. expression score in LCM sample: '40.8308'
Tissue used: 'pure endosperm, no chalazal'
AT3G17820 GLN1.3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.5 x 10-15 113 3 16 139 97.41% 89.68% 116 155 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.4e-16'
Avg. expression score for this sample: '700.414'
Avg. expression score in LCM sample: '40.8308'
Tissue used: 'full endosperm'
AT3G17810 PYD1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '724.5'
Avg. expression score in LCM sample: '105.222'
Tissue used: 'full endosperm'
AT3G17810 PYD1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '325.911'
Avg. expression score in LCM sample: '105.222'
Tissue used: 'pure endosperm, no chalazal'
AT3G17810 PYD1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17810 PYD1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17810 PYD1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17810 PYD1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '197.187'
Avg. embryo expression (LCM): '65.9828'
AT3G17800 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 50 52 11 12 49.02% 52.17% 102 23 TAIR8 Avg. embryo expression (dissected): '729.494'
Avg. embryo expression (LCM): '378.478'
AT3G17800 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.24383 x 10-1 33 13 71.74% 46 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17800 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.6 x 10-6 92 15 85.98% 107 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.17871 x 10-1 109 23 46 35 82.58% 43.21% 132 81 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.677149'
Avg. expression score for this sample: '903.627'
Avg. expression score in LCM sample: '84.9099'
Tissue used: 'pure endosperm, no chalazal'
AT3G17800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.12219 x 10-1 149 52 97 119 74.13% 55.09% 201 216 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.677149'
Avg. expression score for this sample: '801.747'
Avg. expression score in LCM sample: '84.9099'
Tissue used: 'full endosperm'
AT3G17800 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.07645 x 10-1 62 21 74.70% 83 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17790 PAP17 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.92575 x 10-1 21 11 65.62% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17790 PAP17 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.29 x 10-4 38 5 88.37% 43 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17790 PAP17 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 6.08392 x 10-1 5 2 0 0 71.43% 7 0 TAIR8 Avg. embryo expression (dissected): '26.3175'
Avg. embryo expression (LCM): '40.3758'
AT3G17790 PAP17 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.53399 x 10-1 6 8 42.86% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17790 PAP17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.04721 x 10-1 42 5 46 36 89.36% 43.90% 47 82 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.330946'
Avg. expression score for this sample: '71.3874'
Avg. expression score in LCM sample: '147.905'
Tissue used: 'full endosperm'
AT3G17790 PAP17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 9 1 4 2 90.00% 33.33% 10 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.330946'
Avg. expression score for this sample: '61.7045'
Avg. expression score in LCM sample: '147.905'
Tissue used: 'pure endosperm, no chalazal'
AT3G17780 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 5 2 4 11 71.43% 73.33% 7 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.766355'
Avg. expression score for this sample: '246.026'
Avg. expression score in LCM sample: '345.357'
Tissue used: 'full endosperm'
AT3G17780 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 14 4 77.78% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17780 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 1 0 1 75.00% 100.00% 4 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.766355'
Avg. expression score for this sample: '596.713'
Avg. expression score in LCM sample: '345.357'
Tissue used: 'pure endosperm, no chalazal'
AT3G17780 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17780 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.78974 x 10-1 16 2 88.89% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17780 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '594.452'
Avg. embryo expression (LCM): '391.175'
AT3G17770 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 32 39 2 9 45.07% 81.82% 71 11 TAIR8 Avg. embryo expression (dissected): '112.744'
Avg. embryo expression (LCM): '70.2652'
AT3G17770 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.061 x 10-3 57 5 91.94% 62 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17770 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.25694 x 10-1 108 34 76.06% 142 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17770 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.096 x 10-3 103 55 29 188 65.19% 86.64% 158 217 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.005709'
Avg. expression score for this sample: '126.048'
Avg. expression score in LCM sample: '34.5842'
Tissue used: 'full endosperm'
AT3G17770 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 21 27 10 49 43.75% 83.05% 48 59 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.005709'
Avg. expression score for this sample: '92.7315'
Avg. expression score in LCM sample: '34.5842'
Tissue used: 'pure endosperm, no chalazal'
AT3G17770 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.1201 x 10-2 153 33 82.26% 186 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17760 GAD5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17760 GAD5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.641437'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G17760 GAD5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17760 GAD5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '9.42292'
Avg. embryo expression (LCM): '9.41893'
AT3G17760 GAD5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17760 GAD5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.0011'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G17750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.05666 x 10-1 43 24 29 111 64.18% 79.29% 67 140 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '53.4215'
Avg. expression score in LCM sample: '49.385'
Tissue used: 'full endosperm'
AT3G17750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.6788 x 10-2 29 25 31 37 53.70% 54.41% 54 68 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '48.1526'
Avg. expression score in LCM sample: '49.385'
Tissue used: 'pure endosperm, no chalazal'
AT3G17750 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.2 x 10-5 80 11 87.91% 91 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17750 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.96648 x 10-1 20 16 55.56% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17750 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.5 x 10-12 107 4 96.40% 111 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17750 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.06204 x 10-1 53 49 21 20 51.96% 48.78% 102 41 TAIR8 Avg. embryo expression (dissected): '84.9038'
Avg. embryo expression (LCM): '64.9027'
AT3G17740 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.00301 x 10-1 149 118 50 49 55.81% 49.49% 267 99 TAIR8 Avg. embryo expression (dissected): '115.552'
Avg. embryo expression (LCM): '90.3841'
AT3G17740 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.56243 x 10-1 45 13 77.59% 58 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17740 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.84782 x 10-1 261 70 78.85% 331 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.298 x 10-2 175 72 54 171 70.85% 76.00% 247 225 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000014'
Avg. expression score for this sample: '94.9953'
Avg. expression score in LCM sample: '65.7585'
Tissue used: 'full endosperm'
AT3G17740 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.28672 x 10-1 251 86 74.48% 337 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G17740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.85 x 10-4 226 62 77 230 78.47% 74.92% 288 307 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000014'
Avg. expression score for this sample: '108.416'
Avg. expression score in LCM sample: '65.7585'
Tissue used: 'pure endosperm, no chalazal'
AT3G17730 NAC057 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '1.99892'
Tissue used: 'pure endosperm, no chalazal'
AT3G17730 NAC057 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'