Displaying data sets 8601 - 8700 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G54780 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.191 x 10-2 14 2 1 15 87.50% 93.75% 16 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.044234'
Avg. expression score for this sample: '30.1619'
Avg. expression score in LCM sample: '1.71966'
Tissue used: 'full endosperm'
AT5G54780 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.45455 x 10-1 4 1 0 1 80.00% 100.00% 5 1 TAIR8 Avg. embryo expression (dissected): '11.8445'
Avg. embryo expression (LCM): '12.5083'
AT5G54780 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.59667 x 10-1 12 0 100.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54780 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 21 2 91.30% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54770 THI1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.7 x 10-15 158 10 94.05% 168 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54770 THI1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.97019 x 10-1 158 122 42 221 56.43% 84.03% 280 263 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.525881'
Avg. expression score for this sample: '13445.8'
Avg. expression score in LCM sample: '4806.13'
Tissue used: 'pure endosperm, no chalazal'
AT5G54770 THI1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.49732 x 10-1 128 88 102 247 59.26% 70.77% 216 349 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.525881'
Avg. expression score for this sample: '10414.7'
Avg. expression score in LCM sample: '4806.13'
Tissue used: 'full endosperm'
AT5G54770 THI1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.77301 x 10-1 151 173 32 44 46.60% 57.89% 324 76 TAIR8 Avg. embryo expression (dissected): '15393'
Avg. embryo expression (LCM): '8007.94'
AT5G54770 THI1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.63 x 10-3 96 25 79.34% 121 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54770 THI1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.718 x 10-3 42 6 87.50% 48 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54760 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 24 7 77.42% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 5 2 4 6 71.43% 60.00% 7 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.362073'
Avg. expression score for this sample: '421.502'
Avg. expression score in LCM sample: '207.476'
Tissue used: 'pure endosperm, no chalazal'
AT5G54760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.52108 x 10-1 15 3 2 10 83.33% 83.33% 18 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.362073'
Avg. expression score for this sample: '640.896'
Avg. expression score in LCM sample: '207.476'
Tissue used: 'full endosperm'
AT5G54760 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.45455 x 10-1 1 4 1 0 20.00% 0.00% 5 1 TAIR8 Avg. embryo expression (dissected): '357.912'
Avg. embryo expression (LCM): '352.896'
AT5G54760 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54760 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.93657 x 10-1 18 10 64.29% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54750 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.5 x 10-9 105 1 99.06% 106 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.40482 x 10-1 16 11 9 18 59.26% 66.67% 27 27 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.162848'
Avg. expression score for this sample: '206.375'
Avg. expression score in LCM sample: '84.6747'
Tissue used: 'pure endosperm, no chalazal'
AT5G54750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.1941 x 10-2 27 10 8 51 72.97% 86.44% 37 59 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.162848'
Avg. expression score for this sample: '365.789'
Avg. expression score in LCM sample: '84.6747'
Tissue used: 'full endosperm'
AT5G54750 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 19 16 6 3 54.29% 33.33% 35 9 TAIR8 Avg. embryo expression (dissected): '217.129'
Avg. embryo expression (LCM): '147.425'
AT5G54750 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.8597 x 10-1 14 6 70.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54750 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.3755 x 10-2 55 9 85.94% 64 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54745 DEG16 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54745 DEG16 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G54745 DEG16 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G54745 DEG16 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G54745 DEG16 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54745 DEG16 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54740 SESA5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54740 SESA5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '269.471'
Avg. expression score in LCM sample: '5.32065'
Tissue used: 'pure endosperm, no chalazal'
AT5G54740 SESA5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2759.03'
Avg. expression score in LCM sample: '5.32065'
Tissue used: 'full endosperm'
AT5G54740 SESA5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '968.29'
Avg. embryo expression (LCM): '10.5994'
AT5G54740 SESA5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54740 SESA5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54730 G18F endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.575 x 10-3 33 0 100.00% 33 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54730 G18F endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 6 0 3 0 100.00% 0.00% 6 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.022165'
Avg. expression score for this sample: '138.383'
Avg. expression score in LCM sample: '28.3229'
Tissue used: 'pure endosperm, no chalazal'
AT5G54730 G18F endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.2614 x 10-2 95 5 21 11 95.00% 34.38% 100 32 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.022165'
Avg. expression score for this sample: '272.394'
Avg. expression score in LCM sample: '28.3229'
Tissue used: 'full endosperm'
AT5G54730 G18F embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 0 2 0 100.00% 0.00% 3 2 TAIR8 Avg. embryo expression (dissected): '96.9855'
Avg. embryo expression (LCM): '20.0309'
AT5G54730 G18F endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.9853 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54730 G18F endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54720 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 18 10 64.29% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54720 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G54720 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 4 3 0 1 57.14% 100.00% 7 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.18149'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G54720 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 7.22393 x 10-1 6 10 0 0 37.50% 16 0 TAIR8 Avg. embryo expression (dissected): '5.77562'
Avg. embryo expression (LCM): '0'
AT5G54720 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54720 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.30769 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54710 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 11 3 78.57% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G54710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.576205'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G54710 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '.308196'
Avg. embryo expression (LCM): '0'
AT5G54710 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54710 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54700 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G54700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.116142'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G54700 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G54700 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54700 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54690 GAUT12 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.15 x 10-4 53 2 96.36% 55 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54690 GAUT12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 5 0 5 1 100.00% 16.67% 5 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.46588'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G54690 GAUT12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 7 1 2 2 87.50% 50.00% 8 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.4736'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G54690 GAUT12 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.5499 x 10-2 12 1 0 2 92.31% 100.00% 13 2 TAIR8 Avg. embryo expression (dissected): '4.50602'
Avg. embryo expression (LCM): '0'
AT5G54690 GAUT12 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54690 GAUT12 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54680 ILR3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.07692 x 10-1 9 0 100.00% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54680 ILR3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '337.762'
Avg. expression score in LCM sample: '111.836'
Tissue used: 'pure endosperm, no chalazal'
AT5G54680 ILR3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 2 100.00% 100.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '309.101'
Avg. expression score in LCM sample: '111.836'
Tissue used: 'full endosperm'
AT5G54680 ILR3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Avg. embryo expression (dissected): '296.868'
Avg. embryo expression (LCM): '119.708'
AT5G54680 ILR3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54680 ILR3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54670 ATK3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1364 x 10-2 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54670 ATK3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 1 1 50.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.346935'
Avg. expression score for this sample: '104.323'
Avg. expression score in LCM sample: '43.8145'
Tissue used: 'pure endosperm, no chalazal'
AT5G54670 ATK3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.86131 x 10-1 1 2 3 1 33.33% 25.00% 3 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.346935'
Avg. expression score for this sample: '203.025'
Avg. expression score in LCM sample: '43.8145'
Tissue used: 'full endosperm'
AT5G54670 ATK3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '87.5503'
Avg. embryo expression (LCM): '89.1282'
AT5G54670 ATK3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.4 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54670 ATK3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.81818 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54660 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 131 0 100.00% 131 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.7 x 10-5 28 0 0 11 100.00% 100.00% 28 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.4e-09'
Avg. expression score for this sample: '34.989'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G54660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.7 x 10-5 32 0 0 7 100.00% 100.00% 32 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.4e-09'
Avg. expression score for this sample: '27.6634'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G54660 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.66667 x 10-1 5 0 0 0 100.00% 5 0 TAIR8 Avg. embryo expression (dissected): '4.26058'
Avg. embryo expression (LCM): '0'
AT5G54660 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54660 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 62 0 100.00% 62 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54650 Fh5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.8 x 10-15 885 140 86.34% 1025 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54650 Fh5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.25021 x 10-1 98 11 32 21 89.91% 39.62% 109 53 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.071983'
Avg. expression score for this sample: '24.9862'
Avg. expression score in LCM sample: '7.81929'
Tissue used: 'pure endosperm, no chalazal'
AT5G54650 Fh5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.82718 x 10-1 242 42 128 165 85.21% 56.31% 284 293 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.071983'
Avg. expression score for this sample: '65.9427'
Avg. expression score in LCM sample: '7.81929'
Tissue used: 'full endosperm'
AT5G54650 Fh5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 41 18 26 5 69.49% 16.13% 59 31 TAIR8 Avg. embryo expression (dissected): '28.5873'
Avg. embryo expression (LCM): '10.7627'
AT5G54650 Fh5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.6442 x 10-1 37 20 64.91% 57 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54650 Fh5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.46476 x 10-1 547 210 72.26% 757 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54640 RAT5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54640 RAT5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '205.001'
Avg. expression score in LCM sample: '79.3246'
Tissue used: 'pure endosperm, no chalazal'
AT5G54640 RAT5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '325.671'
Avg. expression score in LCM sample: '79.3246'
Tissue used: 'full endosperm'
AT5G54640 RAT5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '331.943'
Avg. embryo expression (LCM): '357.744'
AT5G54640 RAT5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54640 RAT5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54630 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2574 x 10-2 11 1 91.67% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.36285 x 10-1 10 14 4 9 41.67% 69.23% 24 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.084643'
Avg. expression score for this sample: '36.0728'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G54630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.04548 x 10-1 8 14 15 27 36.36% 64.29% 22 42 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.084643'
Avg. expression score for this sample: '17.7123'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G54630 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.49176 x 10-1 156 119 48 24 56.73% 33.33% 275 72 TAIR8 Avg. embryo expression (dissected): '483.293'
Avg. embryo expression (LCM): '233.125'
AT5G54630 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 4 4 50.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54630 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.52247 x 10-1 5 2 71.43% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'