Displaying data sets 86701 - 86800 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G18500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.8727 x 10-2 21 25 25 40 45.65% 61.54% 46 65 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.09924'
Avg. expression score for this sample: '14.2057'
Avg. expression score in LCM sample: '21.7382'
Tissue used: 'pure endosperm, no chalazal'
AT3G18500 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.07 x 10-4 75 17 81.52% 92 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.4058 x 10-1 22 22 12 34 50.00% 73.91% 44 46 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.09924'
Avg. expression score for this sample: '8.80453'
Avg. expression score in LCM sample: '21.7382'
Tissue used: 'full endosperm'
AT3G18500 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.8 x 10-12 90 5 94.74% 95 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18500 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.9747 x 10-2 53 30 11 13 63.86% 54.17% 83 24 TAIR8 Avg. embryo expression (dissected): '26.663'
Avg. embryo expression (LCM): '16.8034'
AT3G18500 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.13593 x 10-1 1 3 25.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18490 ASPG1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 464 77 85.77% 541 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18490 ASPG1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 4434 30 99.33% 4464 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18490 ASPG1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.082 x 10-3 133 73 42 54 64.56% 56.25% 206 96 TAIR8 Avg. embryo expression (dissected): '549.872'
Avg. embryo expression (LCM): '135.896'
AT3G18490 ASPG1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 2333 9 99.62% 2342 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18490 ASPG1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.5 x 10-19 840 118 224 549 87.68% 71.02% 958 773 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1678.89'
Avg. expression score in LCM sample: '359.57'
Tissue used: 'pure endosperm, no chalazal'
AT3G18490 ASPG1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 1652 162 215 1239 91.07% 85.21% 1814 1454 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2156.95'
Avg. expression score in LCM sample: '359.57'
Tissue used: 'full endosperm'
AT3G18485 ILR2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.85714 x 10-1 1 0 3 0 100.00% 0.00% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.485714'
Avg. expression score for this sample: '2.14978'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G18485 ILR2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '5.07417'
Avg. embryo expression (LCM): '3.25267'
AT3G18485 ILR2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18485 ILR2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.75758 x 10-1 4 4 50.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18485 ILR2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.485714'
Avg. expression score for this sample: '2.66544'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G18485 ILR2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.4 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18480 CASP endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 12 2 85.71% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18480 CASP endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 2 0 1 33.33% 100.00% 3 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.681659'
Avg. expression score for this sample: '42.0302'
Avg. expression score in LCM sample: '24.7954'
Tissue used: 'pure endosperm, no chalazal'
AT3G18480 CASP endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.10777 x 10-1 4 0 1 6 100.00% 85.71% 4 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.681659'
Avg. expression score for this sample: '72.624'
Avg. expression score in LCM sample: '24.7954'
Tissue used: 'full endosperm'
AT3G18480 CASP endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.66304 x 10-1 9 0 100.00% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18480 CASP embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 1 0 1 0.00% 100.00% 1 1 TAIR8 Avg. embryo expression (dissected): '33.8895'
Avg. embryo expression (LCM): '23.7608'
AT3G18480 CASP endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18470 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18470 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18470 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.829489'
Avg. embryo expression (LCM): '0'
AT3G18470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '32.0206'
Avg. expression score in LCM sample: '275.057'
Tissue used: 'pure endosperm, no chalazal'
AT3G18470 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 2 33.33% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '6.0083'
Avg. expression score in LCM sample: '275.057'
Tissue used: 'full endosperm'
AT3G18460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G18460 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G18460 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18460 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18460 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.465362'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G18450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G18450 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G18450 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18450 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G18450 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18440 ALMT9 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18440 ALMT9 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18440 ALMT9 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Avg. embryo expression (dissected): '20.683'
Avg. embryo expression (LCM): '23.8739'
AT3G18440 ALMT9 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18440 ALMT9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.76471 x 10-1 4 1 0 4 80.00% 100.00% 5 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.766355'
Avg. expression score for this sample: '43.9786'
Avg. expression score in LCM sample: '45.5929'
Tissue used: 'pure endosperm, no chalazal'
AT3G18440 ALMT9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 3 3 11 25.00% 78.57% 4 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.766355'
Avg. expression score for this sample: '63.9632'
Avg. expression score in LCM sample: '45.5929'
Tissue used: 'full endosperm'
AT3G18430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.03422 x 10-1 22 13 10 40 62.86% 80.00% 35 50 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.561408'
Avg. expression score for this sample: '252.433'
Avg. expression score in LCM sample: '49.238'
Tissue used: 'full endosperm'
AT3G18430 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.5846 x 10-2 11 2 2 4 84.62% 66.67% 13 6 TAIR8 Avg. embryo expression (dissected): '121.537'
Avg. embryo expression (LCM): '107.514'
AT3G18430 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 7 2 77.78% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18430 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.33319 x 10-1 30 9 76.92% 39 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.54622 x 10-1 5 4 5 8 55.56% 61.54% 9 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.561408'
Avg. expression score for this sample: '103.342'
Avg. expression score in LCM sample: '49.238'
Tissue used: 'pure endosperm, no chalazal'
AT3G18430 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.5407 x 10-2 63 12 84.00% 75 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18420 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.65512 x 10-1 9 8 52.94% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 8 3 4 4 72.73% 50.00% 11 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.656511'
Avg. expression score for this sample: '142.864'
Avg. expression score in LCM sample: '69.6828'
Tissue used: 'pure endosperm, no chalazal'
AT3G18420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.10189 x 10-1 35 6 18 28 85.37% 60.87% 41 46 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.656511'
Avg. expression score for this sample: '161.052'
Avg. expression score in LCM sample: '69.6828'
Tissue used: 'full endosperm'
AT3G18420 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.0143 x 10-2 31 3 91.18% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18420 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 30 28 5 2 51.72% 28.57% 58 7 TAIR8 Avg. embryo expression (dissected): '413.358'
Avg. embryo expression (LCM): '430.885'
AT3G18420 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.57044 x 10-1 9 5 64.29% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18410 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18410 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18410 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1955.12'
Avg. embryo expression (LCM): '1394.68'
AT3G18410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1276.97'
Avg. expression score in LCM sample: '577.422'
Tissue used: 'pure endosperm, no chalazal'
AT3G18410 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '813.754'
Avg. expression score in LCM sample: '577.422'
Tissue used: 'full endosperm'
AT3G18400 NAC058 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.7 x 10-6 0 1 0 59 0.00% 100.00% 1 59 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.7e-06'
Avg. expression score for this sample: '21.3049'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G18400 NAC058 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G18400 NAC058 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18400 NAC058 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 15 0 100.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18400 NAC058 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18400 NAC058 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.7e-06'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G18390 EMB1865 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.28424 x 10-1 6 7 2 2 46.15% 50.00% 13 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.173883'
Avg. expression score for this sample: '1099.08'
Avg. expression score in LCM sample: '320.503'
Tissue used: 'pure endosperm, no chalazal'
AT3G18390 EMB1865 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.3728 x 10-2 17 5 77.27% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18390 EMB1865 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.96431 x 10-1 12 19 11 32 38.71% 74.42% 31 43 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.173883'
Avg. expression score for this sample: '889.679'
Avg. expression score in LCM sample: '320.503'
Tissue used: 'full endosperm'
AT3G18390 EMB1865 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.19921 x 10-1 13 7 65.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18390 EMB1865 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.00481 x 10-1 13 22 2 3 37.14% 60.00% 35 5 TAIR8 Avg. embryo expression (dissected): '2940.98'
Avg. embryo expression (LCM): '1650.57'
AT3G18390 EMB1865 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.63898 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18380 SHH2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.44444 x 10-1 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18380 SHH2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.398 x 10-3 15 1 93.75% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18380 SHH2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.37186 x 10-1 5 1 2 1 83.33% 33.33% 6 3 TAIR8 Avg. embryo expression (dissected): '144.889'
Avg. embryo expression (LCM): '89.7059'
AT3G18380 SHH2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.79488 x 10-1 8 6 57.14% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18380 SHH2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.92075 x 10-1 0 1 3 3 0.00% 50.00% 1 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.302829'
Avg. expression score for this sample: '102.91'
Avg. expression score in LCM sample: '42.815'
Tissue used: 'pure endosperm, no chalazal'
AT3G18380 SHH2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.6985 x 10-1 3 3 3 1 50.00% 25.00% 6 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.302829'
Avg. expression score for this sample: '78.8708'
Avg. expression score in LCM sample: '42.815'
Tissue used: 'full endosperm'
AT3G18370 ATSYTF endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 11 7 9 19 61.11% 67.86% 18 28 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.835369'
Avg. expression score for this sample: '34.7984'
Avg. expression score in LCM sample: '7.37835'
Tissue used: 'full endosperm'
AT3G18370 ATSYTF embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.49887 x 10-1 5 14 0 2 26.32% 100.00% 19 2 TAIR8 Avg. embryo expression (dissected): '73.5266'
Avg. embryo expression (LCM): '38.2409'
AT3G18370 ATSYTF endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.08512 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18370 ATSYTF endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.13 x 10-3 31 2 93.94% 33 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18370 ATSYTF endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.30769 x 10-1 5 0 0 2 100.00% 100.00% 5 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.835369'
Avg. expression score for this sample: '16.2847'
Avg. expression score in LCM sample: '7.37835'
Tissue used: 'pure endosperm, no chalazal'
AT3G18370 ATSYTF endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.88032 x 10-1 11 2 84.62% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18362 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18362 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G18362 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G18362 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18362 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G18362 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18360 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18360 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.4188 x 10-1 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18360 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 1 0 0 75.00% 4 0 TAIR8 Avg. embryo expression (dissected): '2.37135'
Avg. embryo expression (LCM): '7.32165'
AT3G18360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.54545 x 10-1 6 0 0 0 100.00% 6 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.320891'
Avg. expression score for this sample: '2.99677'
Avg. expression score in LCM sample: '1.71966'
Tissue used: 'pure endosperm, no chalazal'