Displaying data sets 86601 - 86700 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G18640 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.82263 x 10-1 42 21 66.67% 63 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18640 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 86 94 27 33 47.78% 55.00% 180 60 TAIR8 Avg. embryo expression (dissected): '578.701'
Avg. embryo expression (LCM): '490.752'
AT3G18640 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.47409 x 10-1 205 89 143 314 69.73% 68.71% 294 457 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.503328'
Avg. expression score for this sample: '629.398'
Avg. expression score in LCM sample: '154.99'
Tissue used: 'full endosperm'
AT3G18640 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.48859 x 10-1 91 49 36 69 65.00% 65.71% 140 105 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.503328'
Avg. expression score for this sample: '425.043'
Avg. expression score in LCM sample: '154.99'
Tissue used: 'pure endosperm, no chalazal'
AT3G18630 UNG endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.43829 x 10-1 25 12 9 10 67.57% 52.63% 37 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '11.2669'
Avg. expression score in LCM sample: '5.17367'
Tissue used: 'pure endosperm, no chalazal'
AT3G18630 UNG endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 18 8 14 29 69.23% 67.44% 26 43 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '9.89992'
Avg. expression score in LCM sample: '5.17367'
Tissue used: 'full endosperm'
AT3G18630 UNG endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.4574 x 10-2 9 12 42.86% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18630 UNG endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0774 x 10-2 31 4 88.57% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18630 UNG embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.94882 x 10-1 46 48 14 9 48.94% 39.13% 94 23 TAIR8 Avg. embryo expression (dissected): '34.3672'
Avg. embryo expression (LCM): '56.6392'
AT3G18630 UNG endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.0264 x 10-2 10 0 100.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18620 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18620 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '44.8601'
Avg. embryo expression (LCM): '28.8847'
AT3G18620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 0 1 100.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '43.9724'
Avg. expression score in LCM sample: '39.9489'
Tissue used: 'full endosperm'
AT3G18620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 0 4 1 100.00% 20.00% 3 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '46.3663'
Avg. expression score in LCM sample: '39.9489'
Tissue used: 'pure endosperm, no chalazal'
AT3G18620 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 14 6 70.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18620 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.0226 x 10-2 10 0 100.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18610 NUC-L2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 18 26 40.91% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18610 NUC-L2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.7101 x 10-2 63 21 75.00% 84 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18610 NUC-L2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '11.4491'
Avg. embryo expression (LCM): '10.2604'
AT3G18610 NUC-L2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18610 NUC-L2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.592075'
Avg. expression score for this sample: '28.5344'
Avg. expression score in LCM sample: '26.8531'
Tissue used: 'pure endosperm, no chalazal'
AT3G18610 NUC-L2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.92075 x 10-1 0 1 3 3 0.00% 50.00% 1 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.592075'
Avg. expression score for this sample: '19.8679'
Avg. expression score in LCM sample: '26.8531'
Tissue used: 'full endosperm'
AT3G18600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '89.7578'
Avg. expression score in LCM sample: '26.5444'
Tissue used: 'full endosperm'
AT3G18600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '90.4515'
Avg. expression score in LCM sample: '26.5444'
Tissue used: 'pure endosperm, no chalazal'
AT3G18600 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18600 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18600 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18600 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '247.191'
Avg. embryo expression (LCM): '445.503'
AT3G18590 ENODL5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G18590 ENODL5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18590 ENODL5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G18590 ENODL5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G18590 ENODL5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18590 ENODL5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18580 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18580 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18580 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18580 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '33.7898'
Avg. embryo expression (LCM): '49.845'
AT3G18580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '10.3404'
Avg. expression score in LCM sample: '3.76267'
Tissue used: 'full endosperm'
AT3G18580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '16.5362'
Avg. expression score in LCM sample: '3.76267'
Tissue used: 'pure endosperm, no chalazal'
AT3G18570 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.37744 x 10-1 3 7 1 2 30.00% 66.67% 10 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.615438'
Avg. expression score for this sample: '77.5633'
Avg. expression score in LCM sample: '17.7257'
Tissue used: 'pure endosperm, no chalazal'
AT3G18570 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 7 5 1 8 58.33% 88.89% 12 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.615438'
Avg. expression score for this sample: '67.0105'
Avg. expression score in LCM sample: '17.7257'
Tissue used: 'full endosperm'
AT3G18570 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.75865 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18570 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18570 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 7 8 3 4 46.67% 57.14% 15 7 TAIR8 Avg. embryo expression (dissected): '191.934'
Avg. embryo expression (LCM): '30.3038'
AT3G18570 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18560 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18560 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '49.1999'
Avg. embryo expression (LCM): '25.833'
AT3G18560 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '13.5402'
Avg. expression score in LCM sample: '6.71695'
Tissue used: 'full endosperm'
AT3G18560 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '6.75874'
Avg. expression score in LCM sample: '6.71695'
Tissue used: 'pure endosperm, no chalazal'
AT3G18560 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18560 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18550 BRC1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.0 x 10-8 1527 2318 39.71% 3845 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18550 BRC1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.90822 x 10-1 8671 2014 81.15% 10685 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18550 BRC1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Avg. embryo expression (dissected): '2.61525'
Avg. embryo expression (LCM): '0'
AT3G18550 BRC1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18550 BRC1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 3 6 11 57.14% 64.71% 7 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.432657'
Avg. expression score for this sample: '14.7885'
Avg. expression score in LCM sample: '41.9038'
Tissue used: 'pure endosperm, no chalazal'
AT3G18550 BRC1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.92122 x 10-1 5 2 5 26 71.43% 83.87% 7 31 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.432657'
Avg. expression score for this sample: '11.9084'
Avg. expression score in LCM sample: '41.9038'
Tissue used: 'full endosperm'
AT3G18540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.3 x 10-15 217 62 25 311 77.78% 92.56% 279 336 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.0e-16'
Avg. expression score for this sample: '2582.14'
Avg. expression score in LCM sample: '782.826'
Tissue used: 'full endosperm'
AT3G18540 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.09 x 10-4 1461 421 77.63% 1882 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18540 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.9888 x 10-2 991 256 79.47% 1247 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.3381 x 10-2 91 24 29 91 79.13% 75.83% 115 120 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.0e-16'
Avg. expression score for this sample: '1447.86'
Avg. expression score in LCM sample: '782.826'
Tissue used: 'pure endosperm, no chalazal'
AT3G18540 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.79537 x 10-1 72 15 82.76% 87 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18540 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.448 x 10-2 70 117 38 39 37.43% 50.65% 187 77 TAIR8 Avg. embryo expression (dissected): '2869.03'
Avg. embryo expression (LCM): '2429.81'
AT3G18535 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.62446 x 10-1 36 49 30 53 42.35% 63.86% 85 83 TAIR8 Avg. embryo expression (dissected): '2097.36'
Avg. embryo expression (LCM): '1847.38'
AT3G18535 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.66472 x 10-1 37 3 92.50% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18535 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.143 x 10-3 41 23 6 92 64.06% 93.88% 64 98 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.9e-06'
Avg. expression score for this sample: '2237.03'
Avg. expression score in LCM sample: '750.872'
Tissue used: 'full endosperm'
AT3G18535 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.7 x 10-4 23 15 5 92 60.53% 94.85% 38 97 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.9e-06'
Avg. expression score for this sample: '1062.83'
Avg. expression score in LCM sample: '750.872'
Tissue used: 'pure endosperm, no chalazal'
AT3G18535 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.53188 x 10-1 352 93 79.10% 445 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18535 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.273 x 10-3 227 84 72.99% 311 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18530 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.869892'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G18530 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.28571 x 10-1 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18530 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18530 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.979713'
Avg. embryo expression (LCM): '0'
AT3G18530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 2 2 0 0 50.00% 4 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.42463'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G18524 MSH2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 19 13 25 55 59.38% 68.75% 32 80 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.567795'
Avg. expression score for this sample: '22.2799'
Avg. expression score in LCM sample: '17.5346'
Tissue used: 'full endosperm'
AT3G18524 MSH2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.8916 x 10-2 103 39 72.54% 142 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18524 MSH2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.8763 x 10-2 104 39 72.73% 143 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18524 MSH2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.37259 x 10-1 17 15 9 15 53.12% 62.50% 32 24 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.567795'
Avg. expression score for this sample: '17.575'
Avg. expression score in LCM sample: '17.5346'
Tissue used: 'pure endosperm, no chalazal'
AT3G18524 MSH2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.8257 x 10-1 38 44 11 12 46.34% 52.17% 82 23 TAIR8 Avg. embryo expression (dissected): '52.1913'
Avg. embryo expression (LCM): '95.5708'
AT3G18524 MSH2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.79059 x 10-1 13 3 81.25% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18520 HDA15 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.04065 x 10-1 97 34 74.05% 131 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18520 HDA15 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.78236 x 10-1 215 243 63 59 46.94% 48.36% 458 122 TAIR8 Avg. embryo expression (dissected): '185.206'
Avg. embryo expression (LCM): '179.236'
AT3G18520 HDA15 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.3895 x 10-1 345 161 209 501 68.18% 70.56% 506 710 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.266442'
Avg. expression score for this sample: '136.259'
Avg. expression score in LCM sample: '81.3383'
Tissue used: 'full endosperm'
AT3G18520 HDA15 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.49396 x 10-1 167 98 92 202 63.02% 68.71% 265 294 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.266442'
Avg. expression score for this sample: '119.935'
Avg. expression score in LCM sample: '81.3383'
Tissue used: 'pure endosperm, no chalazal'
AT3G18520 HDA15 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.9603 x 10-2 512 187 73.25% 699 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18520 HDA15 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.8 x 10-21 903 172 84.00% 1075 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18518 RTFL20 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18518 RTFL20 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G18518 RTFL20 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18518 RTFL20 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G18518 RTFL20 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18518 RTFL20 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G18510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 9 4 4 9 69.23% 69.23% 13 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.604715'
Avg. expression score for this sample: '29.4773'
Avg. expression score in LCM sample: '10.5531'
Tissue used: 'full endosperm'
AT3G18510 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.54376 x 10-1 26 14 65.00% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18510 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.40453 x 10-1 16 1 94.12% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.82043 x 10-1 7 0 1 2 100.00% 66.67% 7 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.604715'
Avg. expression score for this sample: '22.1912'
Avg. expression score in LCM sample: '10.5531'
Tissue used: 'pure endosperm, no chalazal'
AT3G18510 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G18510 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.14286 x 10-1 3 0 0 1 100.00% 100.00% 3 1 TAIR8 Avg. embryo expression (dissected): '65.128'
Avg. embryo expression (LCM): '81.1159'