| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G328224 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.336144 x 10-1 | 11 | 5 | 12 | 32 | 68.75% | 72.73% | 16 | 44 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1336144' χ2 p-value for Mo17 x B73: '.0025688' Biased in favor of strain: '' |
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| GRMZM2G328224 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.86 x 10-9 | 35 | 58 | 22 | 181 | 37.63% | 89.16% | 93 | 203 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.86e-09' χ2 p-value for Mo17 x B73: '1.05e-11' Biased in favor of strain: 'Mo17' |
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| GRMZM2G328168 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.3 x 10-29 | 369 | 71 | 258 | 58 | 83.86% | 18.35% | 440 | 316 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '2.29e-29' Biased in favor of strain: 'B73' |
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| GRMZM2G328168 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.92 x 10-16 | 344 | 58 | 297 | 138 | 85.57% | 31.72% | 402 | 435 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.92e-16' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G328133 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.348273 x 10-1 | 6 | 10 | 12 | 11 | 37.50% | 47.83% | 16 | 23 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.8348273' Biased in favor of strain: '' |
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| GRMZM2G328133 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G328060 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.90153 x 10-1 | 100 | 110 | 66 | 93 | 47.62% | 58.49% | 210 | 159 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.490153' χ2 p-value for Mo17 x B73: '.0322547' Biased in favor of strain: '' |
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| GRMZM2G328060 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.09115 x 10-2 | 168 | 57 | 87 | 103 | 74.67% | 54.21% | 225 | 190 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0109115' χ2 p-value for Mo17 x B73: '.0002703' Biased in favor of strain: '' |
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| GRMZM2G327999 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 4 | 0.00% | 100.00% | 2 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G327999 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G327907 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 1 | 3 | 7 | 75.00% | 70.00% | 4 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.2059032' Biased in favor of strain: '' |
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| GRMZM2G327907 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 1 | 5 | 3 | 75.00% | 37.50% | 4 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7236798' χ2 p-value for Mo17 x B73: '.0801183' Biased in favor of strain: '' |
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| GRMZM2G327692 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 0 | 0.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G327692 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 6 | 0 | 14 | 0.00% | 100.00% | 6 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000532' χ2 p-value for Mo17 x B73: '.008151' Biased in favor of strain: '' |
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| GRMZM2G327686 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.16 x 10-6 | 23 | 66 | 24 | 69 | 25.84% | 74.19% | 89 | 93 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.16e-06' χ2 p-value for Mo17 x B73: '3.07e-06' Biased in favor of strain: 'Mo17' |
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| GRMZM2G327686 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.005 x 10-4 | 17 | 48 | 10 | 59 | 26.15% | 85.51% | 65 | 69 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.24e-12' χ2 p-value for Mo17 x B73: '.0009005' Biased in favor of strain: 'Mo17' |
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| GRMZM2G327662 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 4 | 0 | 4 | 0.00% | 100.00% | 4 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G327662 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.26 x 10-9 | 0 | 23 | 0 | 69 | 0.00% | 100.00% | 23 | 69 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.18e-11' χ2 p-value for Mo17 x B73: '4.26e-09' Biased in favor of strain: 'Mo17' |
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| GRMZM2G327655 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.55 x 10-5 | 464 | 351 | 359 | 193 | 56.93% | 34.96% | 815 | 552 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000755' χ2 p-value for Mo17 x B73: '1.60e-12' Biased in favor of strain: 'B73' |
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| GRMZM2G327655 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.94941 x 10-1 | 410 | 150 | 267 | 513 | 73.21% | 65.77% | 560 | 780 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0010134' χ2 p-value for Mo17 x B73: '.594941' Biased in favor of strain: '' |
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| GRMZM2G327635 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 0 | 0.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G327635 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 3 | 0.00% | 100.00% | 1 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: '' |
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| GRMZM2G327605 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 1 | 1 | 1 | 75.00% | 50.00% | 4 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G327605 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G327427 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 0 | 396 | 1 | 364 | 0.00% | 99.73% | 396 | 365 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'Mo17' |
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| GRMZM2G327427 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.06 x 10-28 | 2 | 215 | 1 | 244 | 0.92% | 99.59% | 217 | 245 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '8.06e-28' Biased in favor of strain: 'Mo17' |
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| GRMZM2G327357 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 3 | 5 | 4 | 72.73% | 44.44% | 11 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.131668' χ2 p-value for Mo17 x B73: '.7388827' Biased in favor of strain: '' |
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| GRMZM2G327357 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.1708 x 10-3 | 105 | 30 | 62 | 45 | 77.78% | 42.06% | 135 | 107 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0061708' χ2 p-value for Mo17 x B73: '6.65e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G327349 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 5 | 1 | 1 | 44.44% | 50.00% | 9 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7388827' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G327349 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 5 | 1 | 0 | 16.67% | 0.00% | 6 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0093742' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G327311 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.18 x 10-6 | 286 | 181 | 282 | 156 | 61.24% | 35.62% | 467 | 438 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.18e-06' χ2 p-value for Mo17 x B73: '1.74e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G327311 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.240807 x 10-1 | 203 | 87 | 111 | 202 | 70.00% | 64.54% | 290 | 313 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2285576' χ2 p-value for Mo17 x B73: '.4240807' Biased in favor of strain: '' |
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| GRMZM2G327263 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.891 x 10-4 | 18 | 0 | 14 | 1 | 100.00% | 6.67% | 18 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000221' χ2 p-value for Mo17 x B73: '.0007891' Biased in favor of strain: 'B73' |
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| GRMZM2G327263 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 18 | 0 | 7 | 0 | 100.00% | 0.00% | 18 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0026999' χ2 p-value for Mo17 x B73: '.0001828' Biased in favor of strain: '' |
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| GRMZM2G327260 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.351434 x 10-1 | 35 | 30 | 43 | 16 | 53.85% | 27.12% | 65 | 59 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5351434' χ2 p-value for Mo17 x B73: '.0004396' Biased in favor of strain: '' |
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| GRMZM2G327260 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G327247 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 519 | 12 | 407 | 5 | 97.74% | 1.21% | 531 | 412 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G327247 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 640 | 1 | 194 | 2 | 99.84% | 1.02% | 641 | 196 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G327234 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.95 x 10-24 | 331 | 77 | 311 | 104 | 81.13% | 25.06% | 408 | 415 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.90e-36' χ2 p-value for Mo17 x B73: '2.95e-24' Biased in favor of strain: 'B73' |
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| GRMZM2G327234 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.93 x 10-6 | 74 | 8 | 90 | 28 | 90.24% | 23.73% | 82 | 118 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.93e-06' χ2 p-value for Mo17 x B73: '4.40e-23' Biased in favor of strain: 'B73' |
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| GRMZM2G327208 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.272594 x 10-1 | 30 | 7 | 10 | 11 | 81.08% | 52.38% | 37 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001561' χ2 p-value for Mo17 x B73: '.8272594' Biased in favor of strain: '' |
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| GRMZM2G327208 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.74 x 10-5 | 82 | 14 | 48 | 29 | 85.42% | 37.66% | 96 | 77 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000974' χ2 p-value for Mo17 x B73: '6.70e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G327189 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.912971 x 10-1 | 26 | 10 | 11 | 8 | 72.22% | 42.11% | 36 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0076608' χ2 p-value for Mo17 x B73: '.4912971' Biased in favor of strain: '' |
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| GRMZM2G327189 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 4 | 12 | 100.00% | 75.00% | 1 | 16 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.4795002' Biased in favor of strain: '' |
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| GRMZM2G327174 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.616799 x 10-1 | 97 | 91 | 62 | 69 | 51.60% | 52.67% | 188 | 131 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6616799' χ2 p-value for Mo17 x B73: '.5408072' Biased in favor of strain: '' |
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| GRMZM2G327174 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 9.0222 x 10-3 | 34 | 32 | 104 | 16 | 51.52% | 13.33% | 66 | 120 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0090222' χ2 p-value for Mo17 x B73: '2.83e-35' Biased in favor of strain: '' |
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| GRMZM2G327099 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.828 x 10-4 | 0 | 14 | 0 | 19 | 0.00% | 100.00% | 14 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001828' χ2 p-value for Mo17 x B73: '.0000131' Biased in favor of strain: 'Mo17' |
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| GRMZM2G327099 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 2 | 12 | 0.00% | 85.71% | 2 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0454988' χ2 p-value for Mo17 x B73: '.1305701' Biased in favor of strain: '' |
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| GRMZM2G327059 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 2 | 0 | 2 | 60.00% | 100.00% | 5 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6547208' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G327059 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.996515 x 10-1 | 74 | 45 | 11 | 45 | 62.18% | 80.36% | 119 | 56 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2996515' χ2 p-value for Mo17 x B73: '.0297581' Biased in favor of strain: '' |
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| GRMZM2G327051 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 3 | 2 | 1 | 0.00% | 33.33% | 3 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
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| GRMZM2G327051 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G327042 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.2 x 10-4 | 84 | 41 | 98 | 43 | 67.20% | 30.50% | 125 | 141 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.00012' χ2 p-value for Mo17 x B73: '3.62e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G327042 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.86 x 10-4 | 166 | 47 | 91 | 67 | 77.93% | 42.41% | 213 | 158 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000486' χ2 p-value for Mo17 x B73: '9.85e-11' Biased in favor of strain: 'B73' |
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| GRMZM2G326734 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.123172 x 10-1 | 70 | 56 | 112 | 90 | 55.56% | 44.55% | 126 | 202 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2123172' χ2 p-value for Mo17 x B73: '.1216429' Biased in favor of strain: '' |
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| GRMZM2G326734 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.1516 x 10-1 | 33 | 26 | 14 | 41 | 55.93% | 74.55% | 59 | 55 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0802679' χ2 p-value for Mo17 x B73: '.21516' Biased in favor of strain: '' |
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| GRMZM2G326707 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.63478 x 10-2 | 22 | 12 | 32 | 15 | 64.71% | 31.91% | 34 | 47 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0863478' χ2 p-value for Mo17 x B73: '.0131491' Biased in favor of strain: '' |
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| GRMZM2G326707 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 15 | 0 | 1 | 5 | 100.00% | 83.33% | 15 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0061701' χ2 p-value for Mo17 x B73: '.3864763' Biased in favor of strain: '' |
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| GRMZM2G326677 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 13 | 8 | 10 | 10 | 61.90% | 50.00% | 21 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2752335' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G326677 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.864763 x 10-1 | 16 | 1 | 6 | 18 | 94.12% | 75.00% | 17 | 24 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0163517' χ2 p-value for Mo17 x B73: '.3864763' Biased in favor of strain: '' |
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| GRMZM2G326643 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 1 | 4 | 3 | 50.00% | 42.86% | 2 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.705457' Biased in favor of strain: '' |
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| GRMZM2G326643 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G326627 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.9595 x 10-3 | 55 | 28 | 43 | 21 | 66.27% | 32.81% | 83 | 64 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0030403' χ2 p-value for Mo17 x B73: '.0059595' Biased in favor of strain: 'B73' |
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| GRMZM2G326627 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.71967 x 10-2 | 31 | 6 | 15 | 10 | 83.78% | 40.00% | 37 | 25 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0271967' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: '' |
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| GRMZM2G326472 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.381343 x 10-1 | 333 | 331 | 297 | 324 | 50.15% | 52.17% | 664 | 621 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9381343' χ2 p-value for Mo17 x B73: '.2785987' Biased in favor of strain: '' |
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| GRMZM2G326472 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.277058 x 10-1 | 896 | 439 | 399 | 746 | 67.12% | 65.15% | 1335 | 1145 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7277058' χ2 p-value for Mo17 x B73: '.2771953' Biased in favor of strain: '' |
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| GRMZM2G326272 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.855597 x 10-1 | 335 | 308 | 310 | 300 | 52.10% | 49.18% | 643 | 610 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2869773' χ2 p-value for Mo17 x B73: '.6855597' Biased in favor of strain: '' |
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| GRMZM2G326272 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.143042 x 10-1 | 208 | 86 | 129 | 231 | 70.75% | 64.17% | 294 | 360 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1376661' χ2 p-value for Mo17 x B73: '.3143042' Biased in favor of strain: '' |
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| GRMZM2G326250 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 1 | 0 | 0 | 50.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G326250 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.3758 x 10-3 | 76 | 20 | 33 | 32 | 79.17% | 49.23% | 96 | 65 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0093758' χ2 p-value for Mo17 x B73: '.0028637' Biased in favor of strain: 'B73' |
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| GRMZM2G326248 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.010503 x 10-1 | 24 | 13 | 28 | 17 | 64.86% | 37.78% | 37 | 45 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.070546' χ2 p-value for Mo17 x B73: '.1010503' Biased in favor of strain: '' |
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| GRMZM2G326248 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 4 | 18 | 100.00% | 81.82% | 4 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.1316681' Biased in favor of strain: '' |
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| GRMZM2G326235 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.97 x 10-9 | 112 | 8 | 76 | 19 | 93.33% | 20.00% | 120 | 95 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.23e-21' χ2 p-value for Mo17 x B73: '4.97e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G326235 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.2 x 10-29 | 385 | 31 | 421 | 74 | 92.55% | 14.95% | 416 | 495 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.17e-29' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G326227 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.572752 x 10-1 | 66 | 61 | 57 | 43 | 51.97% | 43.00% | 127 | 100 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6572752' χ2 p-value for Mo17 x B73: '.1615133' Biased in favor of strain: '' |
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| GRMZM2G326227 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.465071 x 10-1 | 16 | 6 | 26 | 26 | 72.73% | 50.00% | 22 | 52 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5465071' χ2 p-value for Mo17 x B73: '.0107874' Biased in favor of strain: '' |
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| GRMZM2G326116 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 8 | 0 | 36 | 0.00% | 100.00% | 8 | 36 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046777' χ2 p-value for Mo17 x B73: '1.97e-09' Biased in favor of strain: '' |
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| GRMZM2G326116 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.85 x 10-17 | 3 | 63 | 0 | 138 | 4.55% | 100.00% | 66 | 138 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.55e-27' χ2 p-value for Mo17 x B73: '9.85e-17' Biased in favor of strain: 'Mo17' |
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| GRMZM2G326066 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.788367 x 10-1 | 659 | 573 | 416 | 391 | 53.49% | 48.45% | 1232 | 807 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0142796' χ2 p-value for Mo17 x B73: '.3788367' Biased in favor of strain: '' |
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| GRMZM2G326066 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.3123 x 10-3 | 1215 | 499 | 537 | 931 | 70.89% | 63.42% | 1714 | 1468 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002105' χ2 p-value for Mo17 x B73: '.0083123' Biased in favor of strain: 'B73' |
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| GRMZM2G325907 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G325907 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 0 | 0 | 0 | 100.00% | 6 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G325850 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.9049 x 10-2 | 22 | 3 | 13 | 4 | 88.00% | 23.53% | 25 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001447' χ2 p-value for Mo17 x B73: '.029049' Biased in favor of strain: 'B73' |
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| GRMZM2G325850 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G325804 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.726433 x 10-1 | 200 | 178 | 197 | 183 | 52.91% | 48.16% | 378 | 380 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2578203' χ2 p-value for Mo17 x B73: '.4726433' Biased in favor of strain: '' |
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| GRMZM2G325804 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.311576 x 10-1 | 7 | 4 | 5 | 7 | 63.64% | 58.33% | 11 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8311576' χ2 p-value for Mo17 x B73: '.5402912' Biased in favor of strain: '' |
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| GRMZM2G325786 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 4 | 0 | 100.00% | 0.00% | 1 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G325786 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G325783 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.249159 x 10-1 | 32 | 23 | 42 | 18 | 58.18% | 30.00% | 55 | 60 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2249159' χ2 p-value for Mo17 x B73: '.0019458' Biased in favor of strain: '' |
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| GRMZM2G325783 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 14 | 0 | 3 | 17.65% | 100.00% | 17 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000181' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: '' |
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| GRMZM2G325749 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.743462 x 10-1 | 483 | 484 | 413 | 511 | 49.95% | 55.30% | 967 | 924 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9743462' χ2 p-value for Mo17 x B73: '.0012643' Biased in favor of strain: '' |
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| GRMZM2G325749 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.73 x 10-5 | 915 | 596 | 474 | 1175 | 60.56% | 71.26% | 1511 | 1649 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.68e-07' χ2 p-value for Mo17 x B73: '.0000773' Biased in favor of strain: 'Mo17' |
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| GRMZM2G325679 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.158122 x 10-1 | 219 | 167 | 170 | 152 | 56.74% | 47.20% | 386 | 322 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0081274' χ2 p-value for Mo17 x B73: '.3158122' Biased in favor of strain: '' |
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| GRMZM2G325679 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 8.03 x 10-11 | 90 | 110 | 114 | 85 | 45.00% | 42.71% | 200 | 199 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.03e-11' χ2 p-value for Mo17 x B73: '7.61e-13' Biased in favor of strain: '' |
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| GRMZM2G325650 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.36 x 10-10 | 51 | 4 | 49 | 4 | 92.73% | 7.55% | 55 | 53 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.34e-10' χ2 p-value for Mo17 x B73: '6.36e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G325650 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.1 x 10-5 | 57 | 6 | 44 | 9 | 90.48% | 16.98% | 63 | 53 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000061' χ2 p-value for Mo17 x B73: '1.68e-14' Biased in favor of strain: 'B73' |
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| GRMZM2G325643 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.857884 x 10-1 | 111 | 97 | 86 | 79 | 53.37% | 47.88% | 208 | 165 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3316851' χ2 p-value for Mo17 x B73: '.5857884' Biased in favor of strain: '' |
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| GRMZM2G325643 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.84 x 10-6 | 112 | 19 | 67 | 59 | 85.50% | 46.83% | 131 | 126 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.84e-06' χ2 p-value for Mo17 x B73: '2.31e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G325575 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.53855 x 10-2 | 1739 | 1599 | 1352 | 1216 | 52.10% | 47.35% | 3338 | 2568 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0153855' χ2 p-value for Mo17 x B73: '.0072802' Biased in favor of strain: 'B73' |
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| GRMZM2G325575 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.11595 x 10-2 | 452 | 157 | 195 | 335 | 74.22% | 63.21% | 609 | 530 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000768' χ2 p-value for Mo17 x B73: '.0911595' Biased in favor of strain: '' |