Displaying data sets 85801 - 85900 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G19820 DWF1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.69478 x 10-1 45 17 36 88 72.58% 70.97% 62 124 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3822.64'
Avg. expression score in LCM sample: '3537.96'
Tissue used: 'full endosperm'
AT3G19820 DWF1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.6579 x 10-1 45 36 39 82 55.56% 67.77% 81 121 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '9184.23'
Avg. expression score in LCM sample: '3537.96'
Tissue used: 'pure endosperm, no chalazal'
AT3G19820 DWF1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.45943 x 10-1 39 11 78.00% 50 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19820 DWF1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.8681 x 10-2 33 6 84.62% 39 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19820 DWF1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.16115 x 10-1 35 54 19 20 39.33% 51.28% 89 39 TAIR8 Avg. embryo expression (dissected): '5837.2'
Avg. embryo expression (LCM): '3453.94'
AT3G19820 DWF1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.6723 x 10-2 14 14 50.00% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19810 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.4993 x 10-2 20 15 57.14% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19810 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.12294 x 10-1 204 212 32 18 49.04% 36.00% 416 50 TAIR8 Avg. embryo expression (dissected): '258.43'
Avg. embryo expression (LCM): '275.284'
AT3G19810 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.60147 x 10-1 72 21 77.42% 93 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.91433 x 10-1 56 25 11 46 69.14% 80.70% 81 57 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.099564'
Avg. expression score for this sample: '68.7267'
Avg. expression score in LCM sample: '10.5237'
Tissue used: 'pure endosperm, no chalazal'
AT3G19810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.53834 x 10-1 97 45 73 186 68.31% 71.81% 142 259 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.099564'
Avg. expression score for this sample: '114.04'
Avg. expression score in LCM sample: '10.5237'
Tissue used: 'full endosperm'
AT3G19810 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.677 x 10-3 152 31 83.06% 183 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19800 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19800 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19800 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '53.2935'
Avg. embryo expression (LCM): '22.505'
AT3G19800 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '43.5571'
Avg. expression score in LCM sample: '8.23083'
Tissue used: 'full endosperm'
AT3G19800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '18.25'
Avg. expression score in LCM sample: '8.23083'
Tissue used: 'pure endosperm, no chalazal'
AT3G19790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.89585 x 10-1 18 1 7 8 94.74% 53.33% 19 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.269495'
Avg. expression score for this sample: '464.871'
Avg. expression score in LCM sample: '101.298'
Tissue used: 'pure endosperm, no chalazal'
AT3G19790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.18701 x 10-1 32 7 18 34 82.05% 65.38% 39 52 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.269495'
Avg. expression score for this sample: '577.406'
Avg. expression score in LCM sample: '101.298'
Tissue used: 'full endosperm'
AT3G19790 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.014 x 10-3 60 5 92.31% 65 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19790 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.12929 x 10-1 7 5 58.33% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19790 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.13605 x 10-1 14 12 7 2 53.85% 22.22% 26 9 TAIR8 Avg. embryo expression (dissected): '828.681'
Avg. embryo expression (LCM): '630.378'
AT3G19790 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.0843 x 10-1 21 10 67.74% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19780 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.67752 x 10-1 25 19 56.82% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19780 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 3 1 0 40.00% 0.00% 5 1 TAIR8 Avg. embryo expression (dissected): '30.4068'
Avg. embryo expression (LCM): '22.0152'
AT3G19780 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.05054 x 10-1 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19780 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.44587 x 10-1 33 9 20 40 78.57% 66.67% 42 60 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '60.4279'
Avg. expression score in LCM sample: '19.4453'
Tissue used: 'full endosperm'
AT3G19780 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.2568 2 6 3 3 25.00% 50.00% 8 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '30.4048'
Avg. expression score in LCM sample: '19.4453'
Tissue used: 'pure endosperm, no chalazal'
AT3G19780 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.7 x 10-5 37 1 97.37% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19770 VPS9A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.1 x 10-6 184 27 87.20% 211 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19770 VPS9A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.13371 x 10-1 28 5 84.85% 33 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19770 VPS9A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.81524 x 10-1 37 43 4 6 46.25% 60.00% 80 10 TAIR8 Avg. embryo expression (dissected): '126.812'
Avg. embryo expression (LCM): '89.1282'
AT3G19770 VPS9A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.1 x 10-5 198 33 85.71% 231 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19770 VPS9A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 54 28 28 57 65.85% 67.06% 82 85 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.054072'
Avg. expression score for this sample: '177.305'
Avg. expression score in LCM sample: '70.9909'
Tissue used: 'pure endosperm, no chalazal'
AT3G19770 VPS9A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.2323 x 10-2 151 63 52 176 70.56% 77.19% 214 228 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.054072'
Avg. expression score for this sample: '247.957'
Avg. expression score in LCM sample: '70.9909'
Tissue used: 'full endosperm'
AT3G19760 EIF4A-III endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.5499 x 10-2 180 62 79 185 74.38% 70.08% 242 264 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.12218'
Avg. expression score for this sample: '896.118'
Avg. expression score in LCM sample: '613.609'
Tissue used: 'full endosperm'
AT3G19760 EIF4A-III endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.70181 x 10-1 129 52 85 159 71.27% 65.16% 181 244 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.12218'
Avg. expression score for this sample: '666.049'
Avg. expression score in LCM sample: '613.609'
Tissue used: 'pure endosperm, no chalazal'
AT3G19760 EIF4A-III endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.4 x 10-11 645 127 83.55% 772 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19760 EIF4A-III endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.6755 x 10-1 611 245 71.38% 856 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19760 EIF4A-III embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.1194 x 10-2 148 200 71 63 42.53% 47.01% 348 134 TAIR8 Avg. embryo expression (dissected): '1050.52'
Avg. embryo expression (LCM): '1478.38'
AT3G19760 EIF4A-III endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.64683 x 10-1 91 28 76.47% 119 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19740 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 7 2 77.78% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19740 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.77087 x 10-1 10 20 2 4 33.33% 66.67% 30 6 TAIR8 Avg. embryo expression (dissected): '98.2474'
Avg. embryo expression (LCM): '111.52'
AT3G19740 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.05165 x 10-1 125 30 80.65% 155 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 6 1 15 33.33% 93.75% 9 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.065148'
Avg. expression score for this sample: '59.1557'
Avg. expression score in LCM sample: '70.3442'
Tissue used: 'pure endosperm, no chalazal'
AT3G19740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.01519 x 10-1 50 20 24 84 71.43% 77.78% 70 108 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.065148'
Avg. expression score for this sample: '112.45'
Avg. expression score in LCM sample: '70.3442'
Tissue used: 'full endosperm'
AT3G19740 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.59893 x 10-1 92 20 82.14% 112 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19720 ARC5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19720 ARC5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19720 ARC5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '131.938'
Avg. embryo expression (LCM): '145.366'
AT3G19720 ARC5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19720 ARC5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '53.88'
Avg. expression score in LCM sample: '87.82'
Tissue used: 'full endosperm'
AT3G19720 ARC5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '69.7687'
Avg. expression score in LCM sample: '87.82'
Tissue used: 'pure endosperm, no chalazal'
AT3G19710 BCAT4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.761856'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G19710 BCAT4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.37965'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G19710 BCAT4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19710 BCAT4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19710 BCAT4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G19710 BCAT4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19700 IKU2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19700 IKU2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G19700 IKU2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19700 IKU2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.205295'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G19700 IKU2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.149485'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G19700 IKU2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19690 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19690 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19690 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.36944'
Avg. embryo expression (LCM): '0'
AT3G19690 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.2095'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G19690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '12.7171'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G19680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 2 1 1 50.00% 50.00% 4 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '22.1285'
Avg. expression score in LCM sample: '3.17475'
Tissue used: 'full endosperm'
AT3G19680 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.6488 x 10-1 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 1 0 100.00% 0.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '11.9426'
Avg. expression score in LCM sample: '3.17475'
Tissue used: 'pure endosperm, no chalazal'
AT3G19680 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19680 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 2 0 0 0.00% 2 0 TAIR8 Avg. embryo expression (dissected): '8.86965'
Avg. embryo expression (LCM): '6.76907'
AT3G19680 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19670 PRP40B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.49077 x 10-1 12 5 70.59% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19670 PRP40B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.67381 x 10-1 45 19 19 6 70.31% 24.00% 64 25 TAIR8 Avg. embryo expression (dissected): '860.864'
Avg. embryo expression (LCM): '433.924'
AT3G19670 PRP40B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.645 x 10-2 120 53 69.36% 173 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19670 PRP40B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.64 x 10-4 130 19 41 117 87.25% 74.05% 149 158 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000436'
Avg. expression score for this sample: '652.18'
Avg. expression score in LCM sample: '121.993'
Tissue used: 'full endosperm'
AT3G19670 PRP40B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.4453 x 10-1 39 12 14 22 76.47% 61.11% 51 36 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000436'
Avg. expression score for this sample: '825.361'
Avg. expression score in LCM sample: '121.993'
Tissue used: 'pure endosperm, no chalazal'
AT3G19670 PRP40B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.0238 x 10-2 246 46 84.25% 292 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19663 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.2569 x 10-2 1 45 2.17% 46 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19663 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.79311'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G19663 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.083 x 10-3 55 1 98.21% 56 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19663 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G19663 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19663 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.85714 x 10-1 0 2 1 1 0.00% 50.00% 2 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '8.56712'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G19660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '222.592'
Avg. expression score in LCM sample: '54.544'
Tissue used: 'full endosperm'
AT3G19660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '123.215'
Avg. expression score in LCM sample: '54.544'
Tissue used: 'pure endosperm, no chalazal'
AT3G19660 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19660 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19660 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.73213'
Avg. embryo expression (LCM): '0'
AT3G19660 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19650 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.131 13 0 100.00% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19650 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 6.37186 x 10-1 6 3 0 0 66.67% 9 0 TAIR8 Avg. embryo expression (dissected): '1641.8'
Avg. embryo expression (LCM): '780.176'
AT3G19650 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G19650 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 5 0 9 37.50% 100.00% 8 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.731094'
Avg. expression score for this sample: '1121.85'
Avg. expression score in LCM sample: '143.114'
Tissue used: 'full endosperm'