Displaying data sets 85301 - 85400 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G20580 COBL10 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.1503 x 10-2 0 4 0.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20580 COBL10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 2 0 0 0.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.893179'
Avg. expression score in LCM sample: '2.48395'
Tissue used: 'full endosperm'
AT3G20570 ENODL9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.23077 x 10-1 2 0 1 5 100.00% 83.33% 2 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.29488'
Avg. expression score in LCM sample: '1.61677'
Tissue used: 'full endosperm'
AT3G20570 ENODL9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.88168 x 10-1 0 3 3 7 0.00% 70.00% 3 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '9.40642'
Avg. expression score in LCM sample: '1.61677'
Tissue used: 'pure endosperm, no chalazal'
AT3G20570 ENODL9 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.8632 x 10-2 13 0 100.00% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20570 ENODL9 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.6068 x 10-2 10 0 100.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20570 ENODL9 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Avg. embryo expression (dissected): '3.09225'
Avg. embryo expression (LCM): '2.76289'
AT3G20570 ENODL9 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20560 PDIL5-3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.93 x 10-4 60 5 92.31% 65 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20560 PDIL5-3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 2301 208 91.71% 2509 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20560 PDIL5-3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.7 x 10-10 586 408 58.95% 994 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20560 PDIL5-3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.60708 x 10-1 23 47 13 19 32.86% 59.38% 70 32 TAIR8 Avg. embryo expression (dissected): '115.363'
Avg. embryo expression (LCM): '62.0394'
AT3G20560 PDIL5-3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.026 x 10-3 113 85 42 278 57.07% 86.88% 198 320 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.006135'
Avg. expression score for this sample: '127.103'
Avg. expression score in LCM sample: '101.827'
Tissue used: 'full endosperm'
AT3G20560 PDIL5-3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.36312 x 10-1 56 49 19 89 53.33% 82.41% 105 108 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.006135'
Avg. expression score for this sample: '130.729'
Avg. expression score in LCM sample: '101.827'
Tissue used: 'pure endosperm, no chalazal'
AT3G20557 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.304892'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G20557 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G20557 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20557 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20557 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20557 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G20555 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G20555 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G20555 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20555 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20555 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G20555 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20550 DDL endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.67837 x 10-1 37 19 66.07% 56 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20550 DDL endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0616 x 10-2 150 36 80.65% 186 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20550 DDL endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.5 x 10-13 221 19 92.08% 240 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20550 DDL embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 88 86 28 28 50.57% 50.00% 174 56 TAIR8 Avg. embryo expression (dissected): '821.622'
Avg. embryo expression (LCM): '344.13'
AT3G20550 DDL endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.504 x 10-3 314 129 96 295 70.88% 75.45% 443 391 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.006446'
Avg. expression score for this sample: '816.532'
Avg. expression score in LCM sample: '84.4836'
Tissue used: 'full endosperm'
AT3G20550 DDL endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.16563 x 10-1 169 70 84 178 70.71% 67.94% 239 262 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.006446'
Avg. expression score for this sample: '1052.4'
Avg. expression score in LCM sample: '84.4836'
Tissue used: 'pure endosperm, no chalazal'
AT3G20540 POLGAMMA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.6718 x 10-2 61 44 21 24 58.10% 53.33% 105 45 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.601809'
Avg. expression score for this sample: '37.4171'
Avg. expression score in LCM sample: '49.679'
Tissue used: 'pure endosperm, no chalazal'
AT3G20540 POLGAMMA1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.84354 x 10-1 94 102 38 28 47.96% 42.42% 196 66 TAIR8 Avg. embryo expression (dissected): '122.716'
Avg. embryo expression (LCM): '219.109'
AT3G20540 POLGAMMA1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.667 x 10-3 235 68 77.56% 303 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20540 POLGAMMA1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.99801 x 10-1 30 11 73.17% 41 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20540 POLGAMMA1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.4 x 10-11 247 28 89.82% 275 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20540 POLGAMMA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.3514 x 10-2 86 29 35 111 74.78% 76.03% 115 146 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.601809'
Avg. expression score for this sample: '64.1541'
Avg. expression score in LCM sample: '49.679'
Tissue used: 'full endosperm'
AT3G20530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0314 x 10-1 4 10 2 3 28.57% 60.00% 14 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.804933'
Avg. expression score for this sample: '3.33169'
Avg. expression score in LCM sample: '.955364'
Tissue used: 'full endosperm'
AT3G20530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.94389 x 10-1 3 0 2 11 100.00% 84.62% 3 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.804933'
Avg. expression score for this sample: '3.68166'
Avg. expression score in LCM sample: '.955364'
Tissue used: 'pure endosperm, no chalazal'
AT3G20530 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.44678 x 10-1 7 10 41.18% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20530 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.77289 x 10-1 2 4 33.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20530 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 1 2 66.67% 0 3 TAIR8 Avg. embryo expression (dissected): '2.4014'
Avg. embryo expression (LCM): '0'
AT3G20530 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20520 SVL3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 22 0 100.00% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20520 SVL3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.55931 x 10-1 212 1 99.53% 213 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20520 SVL3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.632 x 10-3 1751 1 99.94% 1752 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20520 SVL3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 2 100.00% 0 2 TAIR8 Avg. embryo expression (dissected): '1.39559'
Avg. embryo expression (LCM): '0'
AT3G20520 SVL3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.0 x 10-30 173 0 4 132 100.00% 97.06% 173 136 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.2e-35'
Avg. expression score for this sample: '56.6429'
Avg. expression score in LCM sample: '1.26402'
Tissue used: 'full endosperm'
AT3G20520 SVL3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.2 x 10-6 48 0 0 4 100.00% 100.00% 48 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.2e-35'
Avg. expression score for this sample: '10.1023'
Avg. expression score in LCM sample: '1.26402'
Tissue used: 'pure endosperm, no chalazal'
AT3G20510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.07283 x 10-1 18 5 3 13 78.26% 81.25% 23 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.019898'
Avg. expression score for this sample: '41.768'
Avg. expression score in LCM sample: '20.7535'
Tissue used: 'pure endosperm, no chalazal'
AT3G20510 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 4 2 2 0 66.67% 0.00% 6 2 TAIR8 Avg. embryo expression (dissected): '15.0509'
Avg. embryo expression (LCM): '17.7327'
AT3G20510 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.03768 x 10-1 12 0 100.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20510 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 9 1 90.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20510 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.725 x 10-3 35 0 100.00% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.4608 x 10-2 21 1 5 18 95.45% 78.26% 22 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.019898'
Avg. expression score for this sample: '44.7704'
Avg. expression score in LCM sample: '20.7535'
Tissue used: 'full endosperm'
AT3G20500 PAP18 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.9 x 10-10 1637 315 911 1629 83.86% 64.13% 1952 2540 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '9.0e-07'
Avg. expression score for this sample: '1118.94'
Avg. expression score in LCM sample: '82.2054'
Tissue used: 'full endosperm'
AT3G20500 PAP18 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.41803 x 10-1 797 224 475 569 78.06% 54.50% 1021 1044 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '9.0e-07'
Avg. expression score for this sample: '780.981'
Avg. expression score in LCM sample: '82.2054'
Tissue used: 'pure endosperm, no chalazal'
AT3G20500 PAP18 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 3797 116 97.04% 3913 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20500 PAP18 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 1284 200 86.52% 1484 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20500 PAP18 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.0904 x 10-2 273 180 124 97 60.26% 43.89% 453 221 TAIR8 Avg. embryo expression (dissected): '497.769'
Avg. embryo expression (LCM): '86.1267'
AT3G20500 PAP18 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.22 x 10-4 183 115 61.41% 298 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20490 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20490 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.49454 x 10-1 36 16 69.23% 52 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20490 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.55434 x 10-1 25 12 67.57% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20490 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.80172 x 10-1 1 7 0 3 12.50% 100.00% 8 3 TAIR8 Avg. embryo expression (dissected): '20.1569'
Avg. embryo expression (LCM): '29.5629'
AT3G20490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.60744 x 10-1 3 2 9 11 60.00% 55.00% 5 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.608843'
Avg. expression score for this sample: '13.6729'
Avg. expression score in LCM sample: '12.067'
Tissue used: 'full endosperm'
AT3G20490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 3 2 100.00% 40.00% 2 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.608843'
Avg. expression score for this sample: '11.1815'
Avg. expression score in LCM sample: '12.067'
Tissue used: 'pure endosperm, no chalazal'
AT3G20480 LpxK endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '12.1437'
Avg. expression score in LCM sample: '11.5232'
Tissue used: 'pure endosperm, no chalazal'
AT3G20480 LpxK embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '20.2558'
Avg. embryo expression (LCM): '17.7202'
AT3G20480 LpxK endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20480 LpxK endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20480 LpxK endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20480 LpxK endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '11.1416'
Avg. expression score in LCM sample: '11.5232'
Tissue used: 'full endosperm'
AT3G20475 MSH5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.99177'
Avg. expression score in LCM sample: '2.73381'
Tissue used: 'full endosperm'
AT3G20475 MSH5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.58456'
Avg. expression score in LCM sample: '2.73381'
Tissue used: 'pure endosperm, no chalazal'
AT3G20475 MSH5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20475 MSH5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20475 MSH5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '6.97017'
Avg. embryo expression (LCM): '4.67179'
AT3G20475 MSH5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20460 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20460 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20460 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20460 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.99904'
Avg. embryo expression (LCM): '0'
AT3G20460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '17.3716'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G20460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.56042'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G20450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '67.336'
Avg. expression score in LCM sample: '18.9456'
Tissue used: 'pure endosperm, no chalazal'
AT3G20450 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '9.45952'
Avg. embryo expression (LCM): '0'
AT3G20450 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20450 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20450 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '9.66847'
Avg. expression score in LCM sample: '18.9456'
Tissue used: 'full endosperm'
AT3G20440 EMB2729 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.91986 x 10-1 14 7 31 40 66.67% 56.34% 21 71 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.360849'
Avg. expression score for this sample: '6.33606'
Avg. expression score in LCM sample: '3.83616'
Tissue used: 'full endosperm'
AT3G20440 EMB2729 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 14 4 8 9 77.78% 52.94% 18 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.360849'
Avg. expression score for this sample: '3.44933'
Avg. expression score in LCM sample: '3.83616'
Tissue used: 'pure endosperm, no chalazal'
AT3G20440 EMB2729 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.069 x 10-3 45 9 83.33% 54 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20440 EMB2729 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.24899 x 10-1 37 20 64.91% 57 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20440 EMB2729 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.40978 x 10-1 63 49 12 10 56.25% 45.45% 112 22 TAIR8 Avg. embryo expression (dissected): '17.7346'
Avg. embryo expression (LCM): '27.8298'
AT3G20440 EMB2729 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.4656 x 10-2 2 7 22.22% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20430 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.0338 x 10-2 132 30 81.48% 162 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G20430 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.9 x 10-5 1700 775 68.69% 2475 TAIR8 Mutant effect: 'N/A (not a MEG)'