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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G55070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 14 8 2 10 63.64% 83.33% 22 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.26732'
Avg. expression score for this sample: '44.5817'
Avg. expression score in LCM sample: '34.0992'
Tissue used: 'pure endosperm, no chalazal'
AT5G55070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.32494 x 10-1 24 7 7 25 77.42% 78.12% 31 32 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.26732'
Avg. expression score for this sample: '52.0444'
Avg. expression score in LCM sample: '34.0992'
Tissue used: 'full endosperm'
AT5G55070 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.2349 x 10-1 19 6 3 3 76.00% 50.00% 25 6 TAIR8 Avg. embryo expression (dissected): '61.5924'
Avg. embryo expression (LCM): '82.334'
AT5G55070 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.64811 x 10-1 1 2 33.33% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G55070 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.42877 x 10-1 43 12 78.18% 55 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G55070 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.26275 x 10-1 42 6 87.50% 48 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G55060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.31094 x 10-1 6 2 3 9 75.00% 75.00% 8 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.009073'
Avg. expression score for this sample: '45.9388'
Avg. expression score in LCM sample: '17.417'
Tissue used: 'pure endosperm, no chalazal'
AT5G55060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.963 x 10-3 27 3 6 32 90.00% 84.21% 30 38 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.009073'
Avg. expression score for this sample: '68.0763'
Avg. expression score in LCM sample: '17.417'
Tissue used: 'full endosperm'
AT5G55060 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.46965 x 10-1 6 3 1 2 66.67% 66.67% 9 3 TAIR8 Avg. embryo expression (dissected): '54.3471'
Avg. embryo expression (LCM): '36.3696'
AT5G55060 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 7 1 87.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G55060 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.6756 x 10-2 62 4 93.94% 66 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G55060 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.65262 x 10-1 65 10 86.67% 75 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G55056 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G55056 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G55056 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G55056 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G55056 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G55056 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G55055 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G55055 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G55055 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G55055 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G55055 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G55055 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G55050 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 22 1 95.65% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G55050 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '7.01126'
Avg. expression score in LCM sample: '4.13011'
Tissue used: 'pure endosperm, no chalazal'
AT5G55050 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.87115'
Avg. expression score in LCM sample: '4.13011'
Tissue used: 'full endosperm'
AT5G55050 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.24187'
Avg. embryo expression (LCM): '2.34845'
AT5G55050 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G55050 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 16 0 100.00% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G55045 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G55045 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G55045 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G55045 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G55045 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G55045 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G55040 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.5 x 10-13 187 10 94.92% 197 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G55040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.66308 x 10-1 158 69 64 142 69.60% 68.93% 227 206 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002651'
Avg. expression score for this sample: '541.934'
Avg. expression score in LCM sample: '86.2768'
Tissue used: 'pure endosperm, no chalazal'
AT5G55040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.62 x 10-4 149 39 39 141 79.26% 78.33% 188 180 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002651'
Avg. expression score for this sample: '443.522'
Avg. expression score in LCM sample: '86.2768'
Tissue used: 'full endosperm'
AT5G55040 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.21566 x 10-1 89 68 53 42 56.69% 44.21% 157 95 TAIR8 Avg. embryo expression (dissected): '455.293'
Avg. embryo expression (LCM): '223.794'
AT5G55040 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.4604 x 10-2 34 4 89.47% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G55040 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.0 x 10-5 76 6 92.68% 82 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G55020 MYB120 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.8 x 10-21 3 61 4.69% 64 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G55020 MYB120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.07985 x 10-1 7 3 1 6 70.00% 85.71% 10 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.06241'
Avg. expression score for this sample: '23.6355'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G55020 MYB120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.24634 x 10-1 39 10 0 6 79.59% 100.00% 49 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.06241'
Avg. expression score for this sample: '66.6609'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G55020 MYB120 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 5 13 1 8 27.78% 88.89% 18 9 TAIR8 Avg. embryo expression (dissected): '38.0368'
Avg. embryo expression (LCM): '0'
AT5G55020 MYB120 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G55020 MYB120 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G55010 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G55010 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G55010 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.19973'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G55010 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.882435'
Avg. embryo expression (LCM): '0'
AT5G55010 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G55010 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G55000 FIP2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G55000 FIP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '24.1101'
Avg. expression score in LCM sample: '9.36257'
Tissue used: 'pure endosperm, no chalazal'
AT5G55000 FIP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '24.6072'
Avg. expression score in LCM sample: '9.36257'
Tissue used: 'full endosperm'
AT5G55000 FIP2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '23.7326'
Avg. embryo expression (LCM): '16.0122'
AT5G55000 FIP2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G55000 FIP2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54990 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54990 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.7708'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G54990 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.59643'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G54990 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.426944'
Avg. embryo expression (LCM): '0'
AT5G54990 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54990 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54980 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54980 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '21.0773'
Avg. expression score in LCM sample: '14.2276'
Tissue used: 'pure endosperm, no chalazal'
AT5G54980 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '57.8705'
Avg. expression score in LCM sample: '14.2276'
Tissue used: 'full endosperm'
AT5G54980 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '20.7368'
Avg. embryo expression (LCM): '15.6354'
AT5G54980 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54980 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54970 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.19973 x 10-1 2 5 28.57% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 4 1 7 50.00% 87.50% 8 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.766128'
Avg. expression score for this sample: '9.78613'
Avg. expression score in LCM sample: '15.9178'
Tissue used: 'pure endosperm, no chalazal'
AT5G54970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.1927 x 10-1 1 0 5 2 100.00% 28.57% 1 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.766128'
Avg. expression score for this sample: '5.83148'
Avg. expression score in LCM sample: '15.9178'
Tissue used: 'full endosperm'
AT5G54970 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.93027 x 10-1 7 2 0 3 77.78% 100.00% 9 3 TAIR8 Avg. embryo expression (dissected): '10.3198'
Avg. embryo expression (LCM): '22.6682'
AT5G54970 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54970 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.80137 x 10-1 17 10 62.96% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54960 PDC2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.7126 x 10-2 72 16 81.82% 88 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54960 PDC2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.81853 x 10-1 41 23 14 43 64.06% 75.44% 64 57 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.568151'
Avg. expression score for this sample: '213.893'
Avg. expression score in LCM sample: '208.358'
Tissue used: 'pure endosperm, no chalazal'
AT5G54960 PDC2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.61335 x 10-1 45 35 35 108 56.25% 75.52% 80 143 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.568151'
Avg. expression score for this sample: '176.651'
Avg. expression score in LCM sample: '208.358'
Tissue used: 'full endosperm'
AT5G54960 PDC2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 7 10 0 2 41.18% 100.00% 17 2 TAIR8 Avg. embryo expression (dissected): '50.1284'
Avg. embryo expression (LCM): '15.1331'
AT5G54960 PDC2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.63499 x 10-1 30 8 78.95% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54960 PDC2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.70327 x 10-1 51 19 72.86% 70 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54950 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54950 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.16818'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G54950 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.37213'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G54950 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G54950 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54950 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54940 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.28375 x 10-1 99 17 85.34% 116 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54940 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.80638 x 10-1 29 12 8 26 70.73% 76.47% 41 34 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002004'
Avg. expression score for this sample: '288.387'
Avg. expression score in LCM sample: '24.6778'
Tissue used: 'pure endosperm, no chalazal'
AT5G54940 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.043 x 10-3 76 20 22 95 79.17% 81.20% 96 117 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002004'
Avg. expression score for this sample: '597.859'
Avg. expression score in LCM sample: '24.6778'
Tissue used: 'full endosperm'
AT5G54940 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 4 3 1 1 57.14% 50.00% 7 2 TAIR8 Avg. embryo expression (dissected): '67.5774'
Avg. embryo expression (LCM): '7.67329'
AT5G54940 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.37228 x 10-1 21 7 75.00% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54940 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.48881 x 10-1 36 11 76.60% 47 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54930 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.3 x 10-9 107 14 88.43% 121 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G54930 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.764 x 10-2 158 81 100 125 66.11% 55.56% 239 225 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.180934'
Avg. expression score for this sample: '1077.4'
Avg. expression score in LCM sample: '681.895'
Tissue used: 'pure endosperm, no chalazal'
AT5G54930 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.42575 x 10-1 176 75 71 110 70.12% 60.77% 251 181 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.180934'
Avg. expression score for this sample: '790.846'
Avg. expression score in LCM sample: '681.895'
Tissue used: 'full endosperm'
AT5G54930 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.22672 x 10-1 105 68 44 30 60.69% 40.54% 173 74 TAIR8 Avg. embryo expression (dissected): '1047.62'
Avg. embryo expression (LCM): '515.002'