Displaying data sets 83901 - 84000 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G22690 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.07547 x 10-1 16 4 3 10 80.00% 76.92% 20 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.694771'
Avg. expression score for this sample: '25.8979'
Avg. expression score in LCM sample: '17.0349'
Tissue used: 'pure endosperm, no chalazal'
AT3G22690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 42 13 21 25 76.36% 54.35% 55 46 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.694771'
Avg. expression score for this sample: '36.536'
Avg. expression score in LCM sample: '17.0349'
Tissue used: 'full endosperm'
AT3G22690 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.248 x 10-3 116 19 85.93% 135 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22680 RDM1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.6002 x 10-1 2 4 33.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22680 RDM1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 2 50.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22680 RDM1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '55.3593'
Avg. embryo expression (LCM): '102.114'
AT3G22680 RDM1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 4 3 57.14% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22680 RDM1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.40482 x 10-1 2 4 3 2 33.33% 40.00% 6 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.328424'
Avg. expression score for this sample: '62.5236'
Avg. expression score in LCM sample: '23.061'
Tissue used: 'full endosperm'
AT3G22680 RDM1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 2 0 2 50.00% 100.00% 4 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.328424'
Avg. expression score for this sample: '62.6442'
Avg. expression score in LCM sample: '23.061'
Tissue used: 'pure endosperm, no chalazal'
AT3G22670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 7 2 2 4 77.78% 66.67% 9 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.231078'
Avg. expression score for this sample: '35.4243'
Avg. expression score in LCM sample: '40.0518'
Tissue used: 'pure endosperm, no chalazal'
AT3G22670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.29888 x 10-1 3 1 4 21 75.00% 84.00% 4 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.231078'
Avg. expression score for this sample: '78.5329'
Avg. expression score in LCM sample: '40.0518'
Tissue used: 'full endosperm'
AT3G22670 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.56297 x 10-1 59 30 66.29% 89 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22670 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.62392 x 10-1 32 13 71.11% 45 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22670 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.68663 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22670 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.80172 x 10-1 3 6 1 1 33.33% 50.00% 9 2 TAIR8 Avg. embryo expression (dissected): '67.9859'
Avg. embryo expression (LCM): '88.538'
AT3G22660 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1495.03'
Avg. embryo expression (LCM): '2424.3'
AT3G22660 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22660 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '516.649'
Avg. expression score in LCM sample: '84.8364'
Tissue used: 'full endosperm'
AT3G22660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '463.261'
Avg. expression score in LCM sample: '84.8364'
Tissue used: 'pure endosperm, no chalazal'
AT3G22660 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22650 CEG endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22650 CEG endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22650 CEG embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.259912'
Avg. embryo expression (LCM): '1.13027'
AT3G22650 CEG endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22650 CEG endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '1.32281'
Tissue used: 'pure endosperm, no chalazal'
AT3G22650 CEG endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.161977'
Avg. expression score in LCM sample: '1.32281'
Tissue used: 'full endosperm'
AT3G22640 PAP85 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2198.86'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G22640 PAP85 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '114.073'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G22640 PAP85 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22640 PAP85 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22640 PAP85 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22640 PAP85 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1073.5'
Avg. embryo expression (LCM): '9.87104'
AT3G22630 PBD1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 7.22393 x 10-1 6 10 0 0 37.50% 16 0 TAIR8 Avg. embryo expression (dissected): '405.513'
Avg. embryo expression (LCM): '326.146'
AT3G22630 PBD1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.82726 x 10-1 57 15 79.17% 72 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22630 PBD1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.9107 x 10-2 7 8 46.67% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22630 PBD1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.72455 x 10-1 13 6 10 8 68.42% 44.44% 19 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.251668'
Avg. expression score for this sample: '404.069'
Avg. expression score in LCM sample: '155.445'
Tissue used: 'pure endosperm, no chalazal'
AT3G22630 PBD1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.2458 x 10-2 35 2 12 28 94.59% 70.00% 37 40 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.251668'
Avg. expression score for this sample: '207.529'
Avg. expression score in LCM sample: '155.445'
Tissue used: 'full endosperm'
AT3G22630 PBD1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.3772 x 10-2 71 51 58.20% 122 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22620 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 19 1 95.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22620 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0625 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22620 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '4.8882'
Avg. embryo expression (LCM): '0'
AT3G22620 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 16 0 100.00% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.9 x 10-5 0 1 2 59 0.00% 96.72% 1 61 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000061'
Avg. expression score for this sample: '209.713'
Avg. expression score in LCM sample: '1.70496'
Tissue used: 'full endosperm'
AT3G22620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000061'
Avg. expression score for this sample: '4.47014'
Avg. expression score in LCM sample: '1.70496'
Tissue used: 'pure endosperm, no chalazal'
AT3G22600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.073755'
Avg. expression score for this sample: '.33101'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G22600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.3755 x 10-2 2 2 0 21 50.00% 100.00% 4 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.073755'
Avg. expression score for this sample: '70.7144'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G22600 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22600 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22600 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22600 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3.32007'
Avg. embryo expression (LCM): '0'
AT3G22590 PHP embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '377.626'
Avg. embryo expression (LCM): '254.311'
AT3G22590 PHP endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22590 PHP endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22590 PHP endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '486.313'
Avg. expression score in LCM sample: '127.857'
Tissue used: 'full endosperm'
AT3G22590 PHP endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '271.028'
Avg. expression score in LCM sample: '127.857'
Tissue used: 'pure endosperm, no chalazal'
AT3G22590 PHP endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22580 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22580 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22580 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G22580 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G22580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G22570 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G22570 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G22570 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22570 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22570 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22570 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G22560 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 2 0 0 33.33% 3 0 TAIR8 Avg. embryo expression (dissected): '7.41124'
Avg. embryo expression (LCM): '3.71734'
AT3G22560 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.3599 x 10-2 148 0 100.00% 148 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22560 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.51687 x 10-1 57 0 100.00% 57 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22560 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.1956 x 10-2 5 0 1 17 100.00% 94.44% 5 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.0e-10'
Avg. expression score for this sample: '29.4732'
Avg. expression score in LCM sample: '2.17529'
Tissue used: 'pure endosperm, no chalazal'
AT3G22560 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.1 x 10-9 31 2 0 60 93.94% 100.00% 33 60 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.0e-10'
Avg. expression score for this sample: '29.3911'
Avg. expression score in LCM sample: '2.17529'
Tissue used: 'full endosperm'
AT3G22560 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.3663 x 10-2 173 0 100.00% 173 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22550 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.12032 x 10-1 6 2 75.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22550 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.82735 x 10-1 7 8 46.67% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22550 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.5846 x 10-2 11 3 1 5 78.57% 83.33% 14 6 TAIR8 Avg. embryo expression (dissected): '60.9072'
Avg. embryo expression (LCM): '143.406'
AT3G22550 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.98568 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22550 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.4929 28 11 11 30 71.79% 73.17% 39 41 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.367397'
Avg. expression score for this sample: '403.27'
Avg. expression score in LCM sample: '358.512'
Tissue used: 'full endosperm'
AT3G22550 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.9449 x 10-2 22 21 23 25 51.16% 52.08% 43 48 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.367397'
Avg. expression score for this sample: '194.412'
Avg. expression score in LCM sample: '358.512'
Tissue used: 'pure endosperm, no chalazal'
AT3G22540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1125.31'
Avg. expression score in LCM sample: '64.0241'
Tissue used: 'pure endosperm, no chalazal'
AT3G22540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1064.16'
Avg. expression score in LCM sample: '64.0241'
Tissue used: 'full endosperm'
AT3G22540 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22540 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22540 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22540 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '46.3813'
Avg. embryo expression (LCM): '93.4484'
AT3G22530 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.2381 x 10-1 1 3 1 0 25.00% 0.00% 4 1 TAIR8 Avg. embryo expression (dissected): '421.944'
Avg. embryo expression (LCM): '401.975'
AT3G22530 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.3254 x 10-2 21 4 84.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22530 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.78261 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.30265 x 10-1 2 5 5 9 28.57% 64.29% 7 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.536507'
Avg. expression score for this sample: '192.404'
Avg. expression score in LCM sample: '105.502'
Tissue used: 'full endosperm'
AT3G22530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.536507'
Avg. expression score for this sample: '258.988'
Avg. expression score in LCM sample: '105.502'
Tissue used: 'pure endosperm, no chalazal'
AT3G22530 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.71838 x 10-1 20 11 64.52% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22520 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.7451 x 10-2 51 11 82.26% 62 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22520 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.0436 x 10-1 12 7 63.16% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22520 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.81268 x 10-1 38 28 7 12 57.58% 63.16% 66 19 TAIR8 Avg. embryo expression (dissected): '307.22'
Avg. embryo expression (LCM): '375.062'
AT3G22520 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1418 x 10-2 90 18 83.33% 108 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 33 11 20 32 75.00% 61.54% 44 52 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.431263'
Avg. expression score for this sample: '259.726'
Avg. expression score in LCM sample: '199.906'
Tissue used: 'pure endosperm, no chalazal'
AT3G22520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.0934 x 10-1 58 24 16 45 70.73% 73.77% 82 61 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.431263'
Avg. expression score for this sample: '309.011'
Avg. expression score in LCM sample: '199.906'
Tissue used: 'full endosperm'