| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G333916 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.16 x 10-22 | 114 | 0 | 94 | 0 | 100.00% | 0.00% | 114 | 94 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.30e-26' χ2 p-value for Mo17 x B73: '3.16e-22' Biased in favor of strain: 'B73' |
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| GRMZM2G333916 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.54 x 10-11 | 89 | 0 | 115 | 0 | 100.00% | 0.00% | 89 | 115 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.54e-11' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G333875 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.967056 x 10-1 | 25 | 35 | 25 | 35 | 41.67% | 58.33% | 60 | 60 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1967056' χ2 p-value for Mo17 x B73: '.1967056' Biased in favor of strain: '' |
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| GRMZM2G333875 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 3 | 6 | 100.00% | 66.67% | 1 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: '' |
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| GRMZM2G333811 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.302 x 10-4 | 1285 | 989 | 1105 | 948 | 56.51% | 46.18% | 2274 | 2053 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.39e-10' χ2 p-value for Mo17 x B73: '.0005302' Biased in favor of strain: 'B73' |
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| GRMZM2G333811 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.378 x 10-4 | 234 | 70 | 445 | 520 | 76.97% | 53.89% | 304 | 965 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001378' χ2 p-value for Mo17 x B73: '3.70e-17' Biased in favor of strain: 'B73' |
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| GRMZM2G333775 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 3 | 0 | 1 | 0.00% | 100.00% | 3 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G333775 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G333678 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.889151 x 10-1 | 94 | 74 | 87 | 76 | 55.95% | 46.63% | 168 | 163 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1228226' χ2 p-value for Mo17 x B73: '.3889151' Biased in favor of strain: '' |
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| GRMZM2G333678 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.59317 x 10-2 | 47 | 14 | 22 | 27 | 77.05% | 55.10% | 61 | 49 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0854056' χ2 p-value for Mo17 x B73: '.0859317' Biased in favor of strain: '' |
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| GRMZM2G333659 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.625 x 10-3 | 46 | 23 | 24 | 3 | 66.67% | 11.11% | 69 | 27 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.005625' χ2 p-value for Mo17 x B73: '.0000531' Biased in favor of strain: 'B73' |
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| GRMZM2G333659 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.937685 x 10-1 | 10 | 1 | 5 | 6 | 90.91% | 54.55% | 11 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0880834' χ2 p-value for Mo17 x B73: '.3937685' Biased in favor of strain: '' |
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| GRMZM2G333641 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.971187 x 10-1 | 151 | 94 | 118 | 99 | 61.63% | 45.62% | 245 | 217 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000271' χ2 p-value for Mo17 x B73: '.1971187' Biased in favor of strain: '' |
||||
| GRMZM2G333641 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.814489 x 10-1 | 271 | 72 | 126 | 217 | 79.01% | 63.27% | 343 | 343 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.24e-06' χ2 p-value for Mo17 x B73: '.1814489' Biased in favor of strain: '' |
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| GRMZM2G333623 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 3 | 7 | 3 | 40.00% | 30.00% | 5 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6547208' χ2 p-value for Mo17 x B73: '.2059032' Biased in favor of strain: '' |
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| GRMZM2G333623 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 1 | 0 | 4 | 87.50% | 100.00% | 8 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2113029' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G333454 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.25549 x 10-2 | 37 | 10 | 35 | 17 | 78.72% | 32.69% | 47 | 52 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000082' χ2 p-value for Mo17 x B73: '.0125549' Biased in favor of strain: 'B73' |
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| GRMZM2G333454 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.52 x 10-6 | 156 | 24 | 46 | 35 | 86.67% | 43.21% | 180 | 81 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.26e-08' χ2 p-value for Mo17 x B73: '7.52e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G333377 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 0 | 0 | 100.00% | 3 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G333377 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 10 | 0 | 0 | 0 | 100.00% | 10 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G333087 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 5 | 0 | 14 | 0.00% | 100.00% | 5 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.0001828' Biased in favor of strain: '' |
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| GRMZM2G333087 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 3 | 0.00% | 100.00% | 2 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0454988' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: '' |
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| GRMZM2G333042 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.083652 x 10-1 | 19 | 7 | 8 | 9 | 73.08% | 52.94% | 26 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0186029' χ2 p-value for Mo17 x B73: '.8083652' Biased in favor of strain: '' |
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| GRMZM2G333042 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 0 | 4 | 100.00% | 100.00% | 2 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G333022 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.482131 x 10-1 | 8 | 4 | 4 | 12 | 66.67% | 75.00% | 12 | 16 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2482131' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G333022 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.173104 x 10-1 | 10 | 2 | 8 | 10 | 83.33% | 55.56% | 12 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.220676' χ2 p-value for Mo17 x B73: '.3173104' Biased in favor of strain: '' |
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| GRMZM2G332843 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.63 x 10-7 | 221 | 122 | 213 | 122 | 64.43% | 36.42% | 343 | 335 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.02e-08' χ2 p-value for Mo17 x B73: '6.63e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G332843 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.4337 x 10-3 | 114 | 32 | 101 | 109 | 78.08% | 51.90% | 146 | 210 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0034337' χ2 p-value for Mo17 x B73: '5.68e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G332821 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 1 | 0 | 100.00% | 0.00% | 2 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G332821 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 3 | 7 | 100.00% | 70.00% | 1 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.8230634' Biased in favor of strain: '' |
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| GRMZM2G332809 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.809 x 10-4 | 531 | 428 | 570 | 456 | 55.37% | 44.44% | 959 | 1026 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0008809' χ2 p-value for Mo17 x B73: '.0003722' Biased in favor of strain: 'B73' |
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| GRMZM2G332809 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.5738 x 10-2 | 233 | 86 | 139 | 190 | 73.04% | 57.75% | 319 | 329 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.015738' χ2 p-value for Mo17 x B73: '.0006023' Biased in favor of strain: '' |
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| GRMZM2G332703 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G332703 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 2 | 100.00% | 100.00% | 1 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G332660 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.822786 x 10-1 | 41 | 54 | 37 | 59 | 43.16% | 61.46% | 95 | 96 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1822786' χ2 p-value for Mo17 x B73: '.0247447' Biased in favor of strain: '' |
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| GRMZM2G332660 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 2 | 3 | 9 | 50.00% | 75.00% | 4 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4794928' χ2 p-value for Mo17 x B73: '.5402915' Biased in favor of strain: '' |
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| GRMZM2G332560 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.414806 x 10-1 | 10 | 7 | 13 | 12 | 58.82% | 48.00% | 17 | 25 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4668543' χ2 p-value for Mo17 x B73: '.8414806' Biased in favor of strain: '' |
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| GRMZM2G332560 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 13 | 1 | 0 | 8 | 92.86% | 100.00% | 14 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0376363' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G332522 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.56 x 10-15 | 252 | 102 | 413 | 184 | 71.19% | 30.82% | 354 | 597 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.56e-15' χ2 p-value for Mo17 x B73: '7.09e-21' Biased in favor of strain: 'B73' |
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| GRMZM2G332522 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.698105 x 10-1 | 19 | 0 | 2 | 11 | 100.00% | 84.62% | 19 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0020548' χ2 p-value for Mo17 x B73: '.1698105' Biased in favor of strain: '' |
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| GRMZM2G332505 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.967175 x 10-1 | 94 | 65 | 97 | 83 | 59.12% | 46.11% | 159 | 180 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0214567' χ2 p-value for Mo17 x B73: '.2967175' Biased in favor of strain: '' |
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| GRMZM2G332505 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.999789 x 10-1 | 14 | 7 | 32 | 35 | 66.67% | 52.24% | 21 | 67 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9999789' χ2 p-value for Mo17 x B73: '.0122376' Biased in favor of strain: '' |
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| GRMZM2G332495 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.2332 x 10-3 | 312 | 193 | 406 | 319 | 61.78% | 44.00% | 505 | 725 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.19e-07' χ2 p-value for Mo17 x B73: '.0012332' Biased in favor of strain: 'B73' |
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| GRMZM2G332495 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.94012 x 10-1 | 196 | 111 | 85 | 230 | 63.84% | 73.02% | 307 | 315 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.294012' χ2 p-value for Mo17 x B73: '.0168274' Biased in favor of strain: '' |
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| GRMZM2G332294 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 10 | 5 | 100.00% | 33.33% | 5 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.1967056' Biased in favor of strain: '' |
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| GRMZM2G332294 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 0 | 16 | 3 | 100.00% | 15.79% | 6 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832656' χ2 p-value for Mo17 x B73: '2.55e-06' Biased in favor of strain: '' |
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| GRMZM2G332259 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 1 | 6 | 5 | 83.33% | 45.45% | 6 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1024704' χ2 p-value for Mo17 x B73: '.7630246' Biased in favor of strain: '' |
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| GRMZM2G332259 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 0 | 0 | 4 | 100.00% | 100.00% | 7 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0613697' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G332258 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 1 | 0.00% | 100.00% | 1 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G332258 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 14 | 0 | 3 | 0.00% | 100.00% | 14 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.21e-07' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: '' |
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| GRMZM2G332225 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 29 | 40 | 31 | 31 | 42.03% | 50.00% | 69 | 62 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1854219' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G332225 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 1 | 10 | 6 | 80.00% | 37.50% | 5 | 16 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5270948' χ2 p-value for Mo17 x B73: '.0133283' Biased in favor of strain: '' |
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| GRMZM2G332102 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.21 x 10-5 | 0 | 26 | 0 | 18 | 0.00% | 100.00% | 26 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.41e-07' χ2 p-value for Mo17 x B73: '.0000221' Biased in favor of strain: 'Mo17' |
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| GRMZM2G332102 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 4 | 0 | 24 | 0.00% | 100.00% | 4 | 24 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046775' χ2 p-value for Mo17 x B73: '.000532' Biased in favor of strain: '' |
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| GRMZM2G331902 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.75896 x 10-1 | 24 | 8 | 21 | 20 | 75.00% | 48.78% | 32 | 41 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046777' χ2 p-value for Mo17 x B73: '.875896' Biased in favor of strain: '' |
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| GRMZM2G331902 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 3 | 8 | 100.00% | 72.73% | 1 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.6698155' Biased in favor of strain: '' |
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| GRMZM2G331833 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.66 x 10-15 | 340 | 103 | 208 | 75 | 76.75% | 26.50% | 443 | 283 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.06e-29' χ2 p-value for Mo17 x B73: '2.66e-15' Biased in favor of strain: 'B73' |
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| GRMZM2G331833 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.453307 x 10-1 | 431 | 212 | 213 | 255 | 67.03% | 54.49% | 643 | 468 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8453307' χ2 p-value for Mo17 x B73: '2.28e-08' Biased in favor of strain: '' |
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| GRMZM2G331779 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.11 x 10-4 | 149 | 86 | 166 | 105 | 63.40% | 38.75% | 235 | 271 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000396' χ2 p-value for Mo17 x B73: '.000211' Biased in favor of strain: 'B73' |
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| GRMZM2G331779 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.9097 x 10-3 | 112 | 33 | 68 | 43 | 77.24% | 38.74% | 145 | 111 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0069097' χ2 p-value for Mo17 x B73: '4.33e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G331766 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.8375 x 10-3 | 58 | 30 | 55 | 22 | 65.91% | 28.57% | 88 | 77 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0028375' χ2 p-value for Mo17 x B73: '.0001694' Biased in favor of strain: 'B73' |
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| GRMZM2G331766 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 0 | 0 | 100.00% | 3 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G331723 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.24 x 10-8 | 0 | 29 | 0 | 29 | 0.00% | 100.00% | 29 | 29 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.24e-08' χ2 p-value for Mo17 x B73: '7.24e-08' Biased in favor of strain: 'Mo17' |
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| GRMZM2G331723 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 4 | 100.00% | 0 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G331720 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 7 | 0 | 11 | 0.00% | 100.00% | 7 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.008151' χ2 p-value for Mo17 x B73: '.0009111' Biased in favor of strain: '' |
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| GRMZM2G331720 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.84597 x 10-2 | 2 | 8 | 1 | 14 | 20.00% | 93.33% | 10 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.001745' χ2 p-value for Mo17 x B73: '.0284597' Biased in favor of strain: '' |
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| GRMZM2G331701 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G331701 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.6492 x 10-1 | 17 | 4 | 19 | 23 | 80.95% | 54.76% | 21 | 42 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.16492' χ2 p-value for Mo17 x B73: '.1017069' Biased in favor of strain: '' |
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| GRMZM2G331652 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.91099 x 10-2 | 103 | 72 | 103 | 70 | 58.86% | 40.46% | 175 | 173 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0191099' χ2 p-value for Mo17 x B73: '.0121093' Biased in favor of strain: 'B73' |
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| GRMZM2G331652 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.992689 x 10-1 | 27 | 6 | 22 | 35 | 81.82% | 61.40% | 33 | 57 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0648412' χ2 p-value for Mo17 x B73: '.3992689' Biased in favor of strain: '' |
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| GRMZM2G331638 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.965 x 10-4 | 62 | 22 | 68 | 33 | 73.81% | 32.67% | 84 | 101 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000127' χ2 p-value for Mo17 x B73: '.0004965' Biased in favor of strain: 'B73' |
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| GRMZM2G331638 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.31 x 10-5 | 38 | 0 | 50 | 0 | 100.00% | 0.00% | 38 | 50 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000131' χ2 p-value for Mo17 x B73: '1.52e-23' Biased in favor of strain: 'B73' |
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| GRMZM2G331566 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.30954 x 10-1 | 81 | 75 | 68 | 51 | 51.92% | 42.86% | 156 | 119 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.630954' χ2 p-value for Mo17 x B73: '.1191414' Biased in favor of strain: '' |
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| GRMZM2G331566 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G331368 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.87 x 10-8 | 1359 | 932 | 933 | 713 | 59.32% | 43.32% | 2291 | 1646 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.62e-19' χ2 p-value for Mo17 x B73: '5.87e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G331368 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.084 x 10-4 | 967 | 375 | 676 | 1120 | 72.06% | 62.36% | 1342 | 1796 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000281' χ2 p-value for Mo17 x B73: '.0001084' Biased in favor of strain: 'B73' |
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| GRMZM2G331283 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.504854 x 10-1 | 38 | 33 | 46 | 43 | 53.52% | 48.31% | 71 | 89 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5529196' χ2 p-value for Mo17 x B73: '.7504854' Biased in favor of strain: '' |
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| GRMZM2G331283 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 2 | 4 | 100.00% | 66.67% | 1 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: '' |
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| GRMZM2G331105 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.905 x 10-4 | 170 | 40 | 98 | 57 | 80.95% | 36.77% | 210 | 155 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.94e-19' χ2 p-value for Mo17 x B73: '.0009905' Biased in favor of strain: 'B73' |
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| GRMZM2G331105 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.94395 x 10-2 | 114 | 42 | 128 | 116 | 73.08% | 47.54% | 156 | 244 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0894395' χ2 p-value for Mo17 x B73: '2.34e-10' Biased in favor of strain: '' |
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| GRMZM2G331015 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.218734 x 10-1 | 16 | 9 | 17 | 20 | 64.00% | 54.05% | 25 | 37 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1615133' χ2 p-value for Mo17 x B73: '.6218734' Biased in favor of strain: '' |
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| GRMZM2G331015 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.170881 x 10-1 | 13 | 5 | 9 | 13 | 72.22% | 59.09% | 18 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6170881' χ2 p-value for Mo17 x B73: '.4509822' Biased in favor of strain: '' |
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| GRMZM2G330772 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.179817 x 10-1 | 56 | 46 | 36 | 33 | 54.90% | 47.83% | 102 | 69 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.322102' χ2 p-value for Mo17 x B73: '.7179817' Biased in favor of strain: '' |
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| GRMZM2G330772 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.248819 x 10-1 | 67 | 28 | 32 | 76 | 70.53% | 70.37% | 95 | 108 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4248819' χ2 p-value for Mo17 x B73: '.4142165' Biased in favor of strain: '' |
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| GRMZM2G330698 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 3 | 4 | 2 | 40.00% | 33.33% | 5 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6547208' χ2 p-value for Mo17 x B73: '.4142162' Biased in favor of strain: '' |
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| GRMZM2G330698 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G330684 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.58576 x 10-2 | 123 | 6 | 46 | 70 | 95.35% | 60.34% | 129 | 116 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.95e-25' χ2 p-value for Mo17 x B73: '.0258576' Biased in favor of strain: '' |
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| GRMZM2G330684 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.3017 x 10-3 | 604 | 53 | 258 | 405 | 91.93% | 61.09% | 657 | 663 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '.0023017' Biased in favor of strain: 'B73' |
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| GRMZM2G330650 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.79 x 10-5 | 220 | 144 | 252 | 109 | 60.44% | 30.19% | 364 | 361 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000679' χ2 p-value for Mo17 x B73: '5.22e-14' Biased in favor of strain: 'B73' |
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| GRMZM2G330650 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.94 x 10-6 | 321 | 96 | 251 | 57 | 76.98% | 18.51% | 417 | 308 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.94e-06' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G330635 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.569 x 10-4 | 191 | 115 | 230 | 158 | 62.42% | 40.72% | 306 | 388 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000014' χ2 p-value for Mo17 x B73: '.0002569' Biased in favor of strain: 'B73' |
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| GRMZM2G330635 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.124365 x 10-1 | 36 | 13 | 54 | 69 | 73.47% | 56.10% | 49 | 123 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3124365' χ2 p-value for Mo17 x B73: '.0128989' Biased in favor of strain: '' |
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| GRMZM2G330457 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 1 | 0.00% | 100.00% | 2 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G330457 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G330455 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.32 x 10-4 | 61 | 0 | 12 | 0 | 100.00% | 0.00% | 61 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.71e-15' χ2 p-value for Mo17 x B73: '.000532' Biased in favor of strain: 'B73' |
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| GRMZM2G330455 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 28 | 0 | 2 | 0 | 100.00% | 0.00% | 28 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001828' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: '' |
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| GRMZM2G330453 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.277631 x 10-1 | 217 | 132 | 171 | 167 | 62.18% | 49.41% | 349 | 338 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.37e-06' χ2 p-value for Mo17 x B73: '.8277631' Biased in favor of strain: '' |
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| GRMZM2G330453 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.0 x 10-30 | 866 | 172 | 429 | 328 | 83.43% | 43.33% | 1038 | 757 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.18e-30' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G330436 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.81691 x 10-2 | 121 | 95 | 89 | 67 | 56.02% | 42.95% | 216 | 156 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0768812' χ2 p-value for Mo17 x B73: '.0781691' Biased in favor of strain: '' |
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| GRMZM2G330436 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.39228 x 10-1 | 41 | 24 | 38 | 10 | 63.08% | 20.83% | 65 | 48 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.539228' χ2 p-value for Mo17 x B73: '1.63e-11' Biased in favor of strain: '' |