Displaying data sets 83701 - 83800 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G22968 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.48893 x 10-1 13 2 86.67% 15 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT3G22968 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.61636 x 10-1 61 2 96.83% 63 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT3G22968 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 15 15 4 3 50.00% 42.86% 30 7 TAIR8 Avg. embryo expression (dissected): '47.0741'
Avg. embryo expression (LCM): '63.9985'
AT3G22968 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 MEG 2.80929 x 10-1 26 5 7 15 83.87% 68.18% 31 22 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.0e-07'
Avg. expression score for this sample: '43.4451'
Avg. expression score in LCM sample: '50.5461'
Tissue used: 'pure endosperm, no chalazal'
AT3G22968 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 MEG 7.5 x 10-9 64 1 2 35 98.46% 94.59% 65 37 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.0e-07'
Avg. expression score for this sample: '104.406'
Avg. expression score in LCM sample: '50.5461'
Tissue used: 'full endosperm'
AT3G22968 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.2829 x 10-2 57 0 100.00% 57 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT3G22961 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.00741 x 10-1 1 2 33.33% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22961 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.9051 x 10-2 29 20 17 10 59.18% 37.04% 49 27 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.089911'
Avg. expression score for this sample: '24.2515'
Avg. expression score in LCM sample: '2.18999'
Tissue used: 'full endosperm'
AT3G22961 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.86152 x 10-1 21 16 6 6 56.76% 50.00% 37 12 TAIR8 Avg. embryo expression (dissected): '37.5428'
Avg. embryo expression (LCM): '7.48491'
AT3G22961 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.2568 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22961 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.8062 x 10-2 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22961 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 6 1 3 2 85.71% 40.00% 7 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.089911'
Avg. expression score for this sample: '5.00437'
Avg. expression score in LCM sample: '2.18999'
Tissue used: 'pure endosperm, no chalazal'
AT3G22960 PKP-ALPHA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.39981 x 10-1 3875 2012 1885 3663 65.82% 66.02% 5887 5548 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.093709'
Avg. expression score for this sample: '1880.63'
Avg. expression score in LCM sample: '1428.45'
Tissue used: 'pure endosperm, no chalazal'
AT3G22960 PKP-ALPHA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.36906 x 10-1 4475 1742 2669 4075 71.98% 60.42% 6217 6744 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.093709'
Avg. expression score for this sample: '1584.39'
Avg. expression score in LCM sample: '1428.45'
Tissue used: 'full endosperm'
AT3G22960 PKP-ALPHA endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.4 x 10-16 1436 485 74.75% 1921 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22960 PKP-ALPHA endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 2751 443 86.13% 3194 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22960 PKP-ALPHA embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.3 x 10-7 5393 4520 1910 1875 54.40% 49.54% 9913 3785 TAIR8 Avg. embryo expression (dissected): '3748.17'
Avg. embryo expression (LCM): '1714.51'
AT3G22960 PKP-ALPHA endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.2571 x 10-1 795 451 63.80% 1246 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22950 ARFC1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.32876 x 10-1 10 2 83.33% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22950 ARFC1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.03 x 10-4 107 12 89.92% 119 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22950 ARFC1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.72482 x 10-1 13 8 2 1 61.90% 33.33% 21 3 TAIR8 Avg. embryo expression (dissected): '103.599'
Avg. embryo expression (LCM): '110.164'
AT3G22950 ARFC1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 12 9 6 19 57.14% 76.00% 21 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.121742'
Avg. expression score for this sample: '149.576'
Avg. expression score in LCM sample: '85.4096'
Tissue used: 'pure endosperm, no chalazal'
AT3G22950 ARFC1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.96338 x 10-1 40 19 67.80% 59 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22950 ARFC1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.15327 x 10-1 35 15 13 58 70.00% 81.69% 50 71 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.121742'
Avg. expression score for this sample: '168.208'
Avg. expression score in LCM sample: '85.4096'
Tissue used: 'full endosperm'
AT3G22942 AGG2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 3 0 3 25.00% 100.00% 4 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '12.8654'
Avg. expression score in LCM sample: '1.30811'
Tissue used: 'full endosperm'
AT3G22942 AGG2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22942 AGG2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '20.2209'
Avg. embryo expression (LCM): '14.5679'
AT3G22942 AGG2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22942 AGG2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.08081 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22942 AGG2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '9.48038'
Avg. expression score in LCM sample: '1.30811'
Tissue used: 'pure endosperm, no chalazal'
AT3G22940 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.210526'
Avg. expression score for this sample: '.41424'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G22940 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22940 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 2.10526 x 10-1 10 0 0 0 100.00% 10 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.210526'
Avg. expression score for this sample: '2.33833'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G22940 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22940 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.83583'
Avg. embryo expression (LCM): '0'
AT3G22940 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22930 CML11 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.92584 x 10-1 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22930 CML11 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.07268 x 10-1 23 22 51.11% 45 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22930 CML11 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.88877 x 10-1 3 18 1 7 14.29% 87.50% 21 8 TAIR8 Avg. embryo expression (dissected): '12.1582'
Avg. embryo expression (LCM): '7.67329'
AT3G22930 CML11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.372 x 10-3 1 71 0 65 1.39% 100.00% 72 65 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000077'
Avg. expression score for this sample: '3.14965'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G22930 CML11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.417 x 10-3 6 26 1 9 18.75% 90.00% 32 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000077'
Avg. expression score for this sample: '4.35619'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G22930 CML11 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.9 x 10-13 54 2 96.43% 56 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22920 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 47 1 97.92% 48 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22920 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '2.1018'
Tissue used: 'full endosperm'
AT3G22920 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G22920 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22920 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22920 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.367355'
Avg. expression score in LCM sample: '2.1018'
Tissue used: 'pure endosperm, no chalazal'
AT3G22910 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.3 x 10-17 158 21 9 170 88.27% 94.97% 179 179 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '424.1'
Avg. expression score in LCM sample: '13.478'
Tissue used: 'pure endosperm, no chalazal'
AT3G22910 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 413 64 62 631 86.58% 91.05% 477 693 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '719.13'
Avg. expression score in LCM sample: '13.478'
Tissue used: 'full endosperm'
AT3G22910 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.30717 x 10-1 1545 152 91.04% 1697 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22910 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.34294 x 10-1 2382 229 91.23% 2611 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22910 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.8 x 10-5 57 15 3 13 79.17% 81.25% 72 16 TAIR8 Avg. embryo expression (dissected): '119.39'
Avg. embryo expression (LCM): '4.52109'
AT3G22910 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.22176 x 10-1 80 10 88.89% 90 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22900 NRPD7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22900 NRPD7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22900 NRPD7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '33.3311'
Avg. embryo expression (LCM): '65.4427'
AT3G22900 NRPD7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '40.3639'
Avg. expression score in LCM sample: '45.5488'
Tissue used: 'pure endosperm, no chalazal'
AT3G22900 NRPD7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.2 3 3 50.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22900 NRPD7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 0 2 100.00% 100.00% 2 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '88.1469'
Avg. expression score in LCM sample: '45.5488'
Tissue used: 'full endosperm'
AT3G22890 APS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 4 2 4 11 66.67% 73.33% 6 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '338.916'
Avg. expression score in LCM sample: '86.8941'
Tissue used: 'full endosperm'
AT3G22890 APS1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.1307 x 10-1 15 1 93.75% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22890 APS1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '580.354'
Avg. embryo expression (LCM): '341.279'
AT3G22890 APS1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.46443 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22890 APS1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.9321 x 10-1 8 1 88.89% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22890 APS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '252.236'
Avg. expression score in LCM sample: '86.8941'
Tissue used: 'pure endosperm, no chalazal'
AT3G22886 MIR167A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.763104'
Avg. expression score for this sample: '3.01375'
Avg. expression score in LCM sample: '2.43985'
Tissue used: 'pure endosperm, no chalazal'
AT3G22886 MIR167A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22886 MIR167A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.63104 x 10-1 5 5 5 8 50.00% 61.54% 10 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.763104'
Avg. expression score for this sample: '17.606'
Avg. expression score in LCM sample: '2.43985'
Tissue used: 'full endosperm'
AT3G22886 MIR167A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.3719 x 10-2 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22886 MIR167A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3.71598'
Avg. embryo expression (LCM): '2.08472'
AT3G22886 MIR167A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.58333 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22880 DMC1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22880 DMC1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22880 DMC1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '9.40241'
Avg. embryo expression (LCM): '6.45511'
AT3G22880 DMC1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '13.2753'
Avg. expression score in LCM sample: '27.0001'
Tissue used: 'pure endosperm, no chalazal'
AT3G22880 DMC1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 0 1 2 66.67% 0 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '4.28668'
Avg. expression score in LCM sample: '27.0001'
Tissue used: 'full endosperm'
AT3G22880 DMC1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.2381 x 10-1 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22870 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 4 2 66.67% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22870 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G22870 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G22870 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22870 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22870 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G22860 TIF3C2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.50057 x 10-1 5 31 1 49 13.89% 98.00% 36 50 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.0043'
Avg. expression score for this sample: '25.688'
Avg. expression score in LCM sample: '29.3811'
Tissue used: 'pure endosperm, no chalazal'
AT3G22860 TIF3C2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.3 x 10-5 9 36 3 179 20.00% 98.35% 45 182 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.0043'
Avg. expression score for this sample: '59.0741'
Avg. expression score in LCM sample: '29.3811'
Tissue used: 'full endosperm'
AT3G22860 TIF3C2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.2 x 10-27 611 9 98.55% 620 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22860 TIF3C2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.4 x 10-13 65 89 42.21% 154 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22860 TIF3C2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 2 0 1 0.00% 100.00% 2 1 TAIR8 Avg. embryo expression (dissected): '1.03555'
Avg. embryo expression (LCM): '1.56982'
AT3G22860 TIF3C2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.83 x 10-4 35 0 100.00% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22850 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.11118 x 10-1 111 25 81.62% 136 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22850 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 x 10-30 768 7 99.10% 775 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22850 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.18245 x 10-1 16 9 1 2 64.00% 66.67% 25 3 TAIR8 Avg. embryo expression (dissected): '12.5333'
Avg. embryo expression (LCM): '1.25586'
AT3G22850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.08 x 10-4 44 4 6 33 91.67% 84.62% 48 39 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.5e-23'
Avg. expression score for this sample: '24.4496'
Avg. expression score in LCM sample: '23.4726'
Tissue used: 'pure endosperm, no chalazal'
AT3G22850 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.6926 x 10-2 541 72 88.25% 613 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.3 x 10-21 476 68 80 348 87.50% 81.31% 544 428 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.5e-23'
Avg. expression score for this sample: '164.521'
Avg. expression score in LCM sample: '23.4726'
Tissue used: 'full endosperm'
AT3G22845 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '479.322'
Avg. expression score in LCM sample: '237.371'
Tissue used: 'full endosperm'
AT3G22845 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22845 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '311.612'
Avg. embryo expression (LCM): '268.126'
AT3G22845 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'