Displaying data sets 83601 - 83700 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G23125 MIR173 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G23125 MIR173 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23125 MIR173 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23125 MIR173 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G23120 RLP38 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.123331'
Avg. embryo expression (LCM): '0'
AT3G23120 RLP38 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23120 RLP38 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.375 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23120 RLP38 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.2 12 0 100.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23120 RLP38 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G23120 RLP38 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 1 0 100.00% 0.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.378437'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G23110 RLP37 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 1 1 2 50.00% 66.67% 2 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.833003'
Avg. expression score in LCM sample: '.587917'
Tissue used: 'full endosperm'
AT3G23110 RLP37 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 0 3 0 100.00% 0.00% 3 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.823129'
Avg. expression score in LCM sample: '.587917'
Tissue used: 'pure endosperm, no chalazal'
AT3G23110 RLP37 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23110 RLP37 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23110 RLP37 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.34842 x 10-1 6 1 1 1 85.71% 50.00% 7 2 TAIR8 Avg. embryo expression (dissected): '2.28048'
Avg. embryo expression (LCM): '0'
AT3G23110 RLP37 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.01307 x 10-1 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23100 XRCC4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.0 x 10-18 182 7 96.30% 189 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23100 XRCC4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.28022 x 10-1 199 112 106 258 63.99% 70.88% 311 364 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.061952'
Avg. expression score for this sample: '304.418'
Avg. expression score in LCM sample: '80.5005'
Tissue used: 'pure endosperm, no chalazal'
AT3G23100 XRCC4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.5208 x 10-2 176 54 76 193 76.52% 71.75% 230 269 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.061952'
Avg. expression score for this sample: '181.575'
Avg. expression score in LCM sample: '80.5005'
Tissue used: 'full endosperm'
AT3G23100 XRCC4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.4533 x 10-2 173 254 51 64 40.52% 55.65% 427 115 TAIR8 Avg. embryo expression (dissected): '360.116'
Avg. embryo expression (LCM): '225.439'
AT3G23100 XRCC4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.49907 x 10-1 37 19 66.07% 56 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23100 XRCC4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.361 x 10-3 125 29 81.17% 154 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23090 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23090 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.3 x 10-6 611 439 58.19% 1050 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23090 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.0299 x 10-2 71 41 10 14 63.39% 58.33% 112 24 TAIR8 Avg. embryo expression (dissected): '143.425'
Avg. embryo expression (LCM): '15.0829'
AT3G23090 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.05201 x 10-1 13 2 86.67% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.42434 x 10-1 2710 1219 1086 1885 68.97% 63.45% 3929 2971 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.070105'
Avg. expression score for this sample: '3177.63'
Avg. expression score in LCM sample: '762.484'
Tissue used: 'full endosperm'
AT3G23090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.03 x 10-3 2014 802 1100 1400 71.52% 56.00% 2816 2500 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.070105'
Avg. expression score for this sample: '2712.96'
Avg. expression score in LCM sample: '762.484'
Tissue used: 'pure endosperm, no chalazal'
AT3G23080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0021 281 99 63 195 73.95% 75.58% 380 258 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.5e-24'
Avg. expression score for this sample: '199.259'
Avg. expression score in LCM sample: '34.6577'
Tissue used: 'pure endosperm, no chalazal'
AT3G23080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.7 x 10-26 368 71 76 546 83.83% 87.78% 439 622 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.5e-24'
Avg. expression score for this sample: '230.296'
Avg. expression score in LCM sample: '34.6577'
Tissue used: 'full endosperm'
AT3G23080 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.8586 x 10-2 230 168 57 54 57.79% 48.65% 398 111 TAIR8 Avg. embryo expression (dissected): '223.019'
Avg. embryo expression (LCM): '38.4167'
AT3G23080 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.69858 x 10-1 170 28 85.86% 198 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23080 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.17 x 10-3 210 25 89.36% 235 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23080 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.721 x 10-3 131 50 72.38% 181 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23070 CFM3A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.011 x 10-3 85 19 81.73% 104 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23070 CFM3A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.72436 x 10-1 56 26 74 116 68.29% 61.05% 82 190 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.682848'
Avg. expression score for this sample: '597.983'
Avg. expression score in LCM sample: '113.85'
Tissue used: 'full endosperm'
AT3G23070 CFM3A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.92897 x 10-1 36 5 12 7 87.80% 36.84% 41 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.682848'
Avg. expression score for this sample: '399'
Avg. expression score in LCM sample: '113.85'
Tissue used: 'pure endosperm, no chalazal'
AT3G23070 CFM3A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.3757 x 10-2 109 34 76.22% 143 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23070 CFM3A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.8464 x 10-2 2 6 25.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23070 CFM3A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.1405 x 10-2 61 25 8 6 70.93% 42.86% 86 14 TAIR8 Avg. embryo expression (dissected): '880.871'
Avg. embryo expression (LCM): '397.341'
AT3G23060 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.162645'
Avg. embryo expression (LCM): '0'
AT3G23060 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23060 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 31 1 96.88% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23060 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.722831'
Avg. expression score in LCM sample: '15.6386'
Tissue used: 'pure endosperm, no chalazal'
AT3G23060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.02992'
Avg. expression score in LCM sample: '15.6386'
Tissue used: 'full endosperm'
AT3G23050 IAA7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.54545 x 10-1 2 0 0 4 100.00% 100.00% 2 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.454545'
Avg. expression score for this sample: '2.84509'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G23050 IAA7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.454545'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G23050 IAA7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23050 IAA7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23050 IAA7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.594124'
Avg. embryo expression (LCM): '0'
AT3G23050 IAA7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23040 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.4886'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G23040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G23040 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G23040 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23040 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23030 IAA2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23030 IAA2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23030 IAA2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.54117 x 10-1 9 18 5 8 33.33% 61.54% 27 13 TAIR8 Avg. embryo expression (dissected): '23.4665'
Avg. embryo expression (LCM): '4.00619'
AT3G23030 IAA2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 38 12 76.00% 50 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23030 IAA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 1 1 50.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.604715'
Avg. expression score for this sample: '1.37843'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G23030 IAA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.89585 x 10-1 17 3 5 9 85.00% 64.29% 20 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.604715'
Avg. expression score for this sample: '11.2376'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G23020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 19 6 8 13 76.00% 61.90% 25 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.836749'
Avg. expression score for this sample: '41.0767'
Avg. expression score in LCM sample: '11.6261'
Tissue used: 'full endosperm'
AT3G23020 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.41197 x 10-1 17 11 2 5 60.71% 71.43% 28 7 TAIR8 Avg. embryo expression (dissected): '73.4234'
Avg. embryo expression (LCM): '101.838'
AT3G23020 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.368 x 10-2 1 3 25.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23020 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.32174 x 10-1 9 6 60.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 1 1 4 75.00% 80.00% 4 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.836749'
Avg. expression score for this sample: '18.3981'
Avg. expression score in LCM sample: '11.6261'
Tissue used: 'pure endosperm, no chalazal'
AT3G23020 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.538 x 10-3 50 4 92.59% 54 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23010 RLP36 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.2 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23010 RLP36 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G23010 RLP36 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 1 0 1 0.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.101247'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G23010 RLP36 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.63636 x 10-1 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23010 RLP36 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23010 RLP36 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G23000 CIPK7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '714.433'
Avg. embryo expression (LCM): '361.863'
AT3G23000 CIPK7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23000 CIPK7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.63043 x 10-1 14 0 100.00% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23000 CIPK7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1202.46'
Avg. expression score in LCM sample: '234.74'
Tissue used: 'pure endosperm, no chalazal'
AT3G23000 CIPK7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.71429 x 10-1 11 1 91.67% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23000 CIPK7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.76471 x 10-1 2 1 0 6 66.67% 100.00% 3 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1736.82'
Avg. expression score in LCM sample: '234.74'
Tissue used: 'full endosperm'
AT3G22990 LFR endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 19 6 17 24 76.00% 58.54% 25 41 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.521217'
Avg. expression score for this sample: '142.748'
Avg. expression score in LCM sample: '91.421'
Tissue used: 'full endosperm'
AT3G22990 LFR endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 39 25 60.94% 64 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22990 LFR endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.02638 x 10-1 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22990 LFR embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.03567 x 10-1 6 5 0 3 54.55% 100.00% 11 3 TAIR8 Avg. embryo expression (dissected): '161.154'
Avg. embryo expression (LCM): '170.005'
AT3G22990 LFR endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.98 x 10-4 40 5 88.89% 45 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22990 LFR endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.03373 x 10-1 6 5 5 2 54.55% 28.57% 11 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.521217'
Avg. expression score for this sample: '118.486'
Avg. expression score in LCM sample: '91.421'
Tissue used: 'pure endosperm, no chalazal'
AT3G22980 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.93959 x 10-1 28 4 13 16 87.50% 55.17% 32 29 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.122027'
Avg. expression score for this sample: '34.5737'
Avg. expression score in LCM sample: '74.8859'
Tissue used: 'pure endosperm, no chalazal'
AT3G22980 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.5 x 10-13 413 34 92.39% 447 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22980 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.80668 x 10-1 76 25 46 112 75.25% 70.89% 101 158 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.122027'
Avg. expression score for this sample: '90.8022'
Avg. expression score in LCM sample: '74.8859'
Tissue used: 'full endosperm'
AT3G22980 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.92762 x 10-1 38 38 15 19 50.00% 55.88% 76 34 TAIR8 Avg. embryo expression (dissected): '86.405'
Avg. embryo expression (LCM): '119.231'
AT3G22980 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.29014 x 10-1 22 7 75.86% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22980 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 211 80 72.51% 291 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22970 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.3046 x 10-2 30 0 100.00% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22970 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.10792 x 10-1 14 3 82.35% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22970 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 7 1 4 30.00% 80.00% 10 5 TAIR8 Avg. embryo expression (dissected): '20.256'
Avg. embryo expression (LCM): '31.9993'
AT3G22970 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.119 x 10-3 52 0 100.00% 52 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G22970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.18082 x 10-1 17 1 9 11 94.44% 55.00% 18 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000602'
Avg. expression score for this sample: '28.2944'
Avg. expression score in LCM sample: '28.0877'
Tissue used: 'pure endosperm, no chalazal'
AT3G22970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.12 x 10-4 45 1 5 27 97.83% 84.38% 46 32 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000602'
Avg. expression score for this sample: '49.159'
Avg. expression score in LCM sample: '28.0877'
Tissue used: 'full endosperm'