Displaying data sets 83301 - 83400 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G23560 ALF5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.758 x 10-3 18 0 0 5 100.00% 100.00% 18 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00036'
Avg. expression score for this sample: '17.9903'
Avg. expression score in LCM sample: '2.49865'
Tissue used: 'full endosperm'
AT3G23560 ALF5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.10526 x 10-1 10 0 0 0 100.00% 10 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00036'
Avg. expression score for this sample: '5.23925'
Avg. expression score in LCM sample: '2.49865'
Tissue used: 'pure endosperm, no chalazal'
AT3G23560 ALF5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23560 ALF5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.08392 x 10-1 4 2 0 1 66.67% 100.00% 6 1 TAIR8 Avg. embryo expression (dissected): '11.3119'
Avg. embryo expression (LCM): '4.26992'
AT3G23550 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.179989'
Avg. embryo expression (LCM): '0'
AT3G23550 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23550 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23550 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23550 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 6 1 1 1 85.71% 50.00% 7 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.635117'
Avg. expression score for this sample: '3.51757'
Avg. expression score in LCM sample: '7.29017'
Tissue used: 'pure endosperm, no chalazal'
AT3G23550 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.635117'
Avg. expression score for this sample: '.647347'
Avg. expression score in LCM sample: '7.29017'
Tissue used: 'full endosperm'
AT3G23540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.34614 x 10-1 6 1 1 10 85.71% 90.91% 7 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.606721'
Avg. expression score for this sample: '31.8976'
Avg. expression score in LCM sample: '25.4274'
Tissue used: 'full endosperm'
AT3G23540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 7 4 3 5 63.64% 62.50% 11 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.606721'
Avg. expression score for this sample: '28.594'
Avg. expression score in LCM sample: '25.4274'
Tissue used: 'pure endosperm, no chalazal'
AT3G23540 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23540 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 7 5 5 3 58.33% 37.50% 12 8 TAIR8 Avg. embryo expression (dissected): '27.2318'
Avg. embryo expression (LCM): '16.4643'
AT3G23540 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.71943 x 10-1 10 0 100.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23540 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.08478 x 10-1 10 2 83.33% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23530 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 25 11 69.44% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23530 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 4 3 57.14% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.245192'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G23530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.163344'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G23530 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.788321'
Avg. embryo expression (LCM): '1.19306'
AT3G23530 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23510 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23510 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G23510 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23510 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 11 0.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G23510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G23490 CYN endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.56178 x 10-1 86 32 35 60 72.88% 63.16% 118 95 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.0e-06'
Avg. expression score for this sample: '117.464'
Avg. expression score in LCM sample: '19.754'
Tissue used: 'pure endosperm, no chalazal'
AT3G23490 CYN endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.9 x 10-8 120 20 39 192 85.71% 83.12% 140 231 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.0e-06'
Avg. expression score for this sample: '126.879'
Avg. expression score in LCM sample: '19.754'
Tissue used: 'full endosperm'
AT3G23490 CYN embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 42 35 13 5 54.55% 27.78% 77 18 TAIR8 Avg. embryo expression (dissected): '69.6307'
Avg. embryo expression (LCM): '54.5419'
AT3G23490 CYN endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.57107 x 10-1 31 13 70.45% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23490 CYN endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 x 10-8 133 4 97.08% 137 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23490 CYN endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.98 x 10-4 64 3 95.52% 67 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23480 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23480 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.445361'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G23480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.315587'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G23480 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23480 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '.535977'
Avg. embryo expression (LCM): '0'
AT3G23470 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '6.27531'
Avg. embryo expression (LCM): '2.59963'
AT3G23470 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23470 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23470 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.102941'
Avg. expression score for this sample: '.532599'
Avg. expression score in LCM sample: '1.01416'
Tissue used: 'pure endosperm, no chalazal'
AT3G23470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.02941 x 10-1 9 0 0 0 100.00% 9 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.102941'
Avg. expression score for this sample: '8.77101'
Avg. expression score in LCM sample: '1.01416'
Tissue used: 'full endosperm'
AT3G23460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '8.03287'
Avg. expression score in LCM sample: '1.61677'
Tissue used: 'full endosperm'
AT3G23460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.85548'
Avg. expression score in LCM sample: '1.61677'
Tissue used: 'pure endosperm, no chalazal'
AT3G23460 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23460 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G23460 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23460 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23440 EDA6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.7778 x 10-2 14 0 100.00% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23440 EDA6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.21053 x 10-1 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23440 EDA6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 0 1 0 100.00% 0.00% 3 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '8.67711'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G23440 EDA6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 6 0 2 1 100.00% 33.33% 6 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '8.7529'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G23440 EDA6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Avg. embryo expression (dissected): '13.4726'
Avg. embryo expression (LCM): '3.85548'
AT3G23440 EDA6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.7619 x 10-1 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23430 PHO1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.56634 x 10-1 25 3 89.29% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23430 PHO1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Avg. embryo expression (dissected): '4.27952'
Avg. embryo expression (LCM): '1.85867'
AT3G23430 PHO1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.06456 x 10-1 14 1 93.33% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23430 PHO1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.6 x 10-10 158 5 96.93% 163 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23430 PHO1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.15 x 10-4 77 21 16 88 78.57% 84.62% 98 104 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.015209'
Avg. expression score for this sample: '59.7846'
Avg. expression score in LCM sample: '56.6605'
Tissue used: 'full endosperm'
AT3G23430 PHO1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.70019 x 10-1 34 17 19 31 66.67% 62.00% 51 50 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.015209'
Avg. expression score for this sample: '57.7783'
Avg. expression score in LCM sample: '56.6605'
Tissue used: 'pure endosperm, no chalazal'
AT3G23420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G23420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.781888'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G23420 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G23420 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23420 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23420 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23410 FAO3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.29777 x 10-1 131 10 92.91% 141 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23410 FAO3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 268 5 98.17% 273 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23410 FAO3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.7 x 10-7 17 1 1 63 94.44% 98.44% 18 64 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.3e-09'
Avg. expression score for this sample: '102.152'
Avg. expression score in LCM sample: '4.86501'
Tissue used: 'full endosperm'
AT3G23410 FAO3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.0741 x 10-2 10 0 0 4 100.00% 100.00% 10 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.3e-09'
Avg. expression score for this sample: '53.6403'
Avg. expression score in LCM sample: '4.86501'
Tissue used: 'pure endosperm, no chalazal'
AT3G23410 FAO3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 32 0 100.00% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23410 FAO3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.03567 x 10-1 8 4 1 1 66.67% 50.00% 12 2 TAIR8 Avg. embryo expression (dissected): '46.304'
Avg. embryo expression (LCM): '48.8403'
AT3G23400 FIB4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '371.854'
Avg. embryo expression (LCM): '182.288'
AT3G23400 FIB4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23400 FIB4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23400 FIB4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23400 FIB4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '806.472'
Avg. expression score in LCM sample: '96.8446'
Tissue used: 'pure endosperm, no chalazal'
AT3G23400 FIB4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1356.27'
Avg. expression score in LCM sample: '96.8446'
Tissue used: 'full endosperm'
AT3G23390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '649.158'
Avg. expression score in LCM sample: '147.802'
Tissue used: 'full endosperm'
AT3G23390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '477.981'
Avg. expression score in LCM sample: '147.802'
Tissue used: 'pure endosperm, no chalazal'
AT3G23390 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23390 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1288.45'
Avg. embryo expression (LCM): '2773.64'
AT3G23390 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23390 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23380 RIC5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23380 RIC5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23380 RIC5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.79263'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G23380 RIC5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.13972'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G23380 RIC5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3.85719'
Avg. embryo expression (LCM): '0'
AT3G23380 RIC5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23370 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.51558 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23370 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.67472 x 10-1 21 9 6 4 70.00% 40.00% 30 10 TAIR8 Avg. embryo expression (dissected): '23.7209'
Avg. embryo expression (LCM): '36.2189'
AT3G23370 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23370 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.47726 x 10-1 24 10 70.59% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.60765 x 10-1 31 5 13 24 86.11% 64.86% 36 37 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.795325'
Avg. expression score for this sample: '25.0099'
Avg. expression score in LCM sample: '45.8722'
Tissue used: 'pure endosperm, no chalazal'
AT3G23370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.9285 x 10-2 12 7 22 17 63.16% 43.59% 19 39 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.795325'
Avg. expression score for this sample: '16.8674'
Avg. expression score in LCM sample: '45.8722'
Tissue used: 'full endosperm'