Displaying data sets 83001 - 83100 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G23990 HSP60 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 1 0 100.00% 0.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '447.417'
Avg. expression score in LCM sample: '69.5652'
Tissue used: 'pure endosperm, no chalazal'
AT3G23990 HSP60 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23990 HSP60 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23990 HSP60 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 4 1 2 1 80.00% 33.33% 5 3 TAIR8 Avg. embryo expression (dissected): '1592.44'
Avg. embryo expression (LCM): '1179.78'
AT3G23980 BLI embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.0674 x 10-1 13 21 3 4 38.24% 57.14% 34 7 TAIR8 Avg. embryo expression (dissected): '91.8518'
Avg. embryo expression (LCM): '60.8212'
AT3G23980 BLI endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.98836 x 10-1 22 5 81.48% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23980 BLI endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.3068 x 10-2 266 64 80.61% 330 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23980 BLI endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.51915 x 10-1 29 11 9 17 72.50% 65.38% 40 26 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.017714'
Avg. expression score for this sample: '103.118'
Avg. expression score in LCM sample: '58.7035'
Tissue used: 'pure endosperm, no chalazal'
AT3G23980 BLI endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.5777 x 10-2 129 46 55 168 73.71% 75.34% 175 223 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.017714'
Avg. expression score for this sample: '148.733'
Avg. expression score in LCM sample: '58.7035'
Tissue used: 'full endosperm'
AT3G23980 BLI endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.7 x 10-12 225 13 94.54% 238 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23970 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.5714 x 10-2 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.44444 x 10-1 2 0 0 3 100.00% 100.00% 2 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.454545'
Avg. expression score for this sample: '3.2655'
Avg. expression score in LCM sample: '4.73273'
Tissue used: 'full endosperm'
AT3G23970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.454545'
Avg. expression score for this sample: '5.83148'
Avg. expression score in LCM sample: '4.73273'
Tissue used: 'pure endosperm, no chalazal'
AT3G23970 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 10 0 100.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23970 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23970 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.467883'
Avg. embryo expression (LCM): '0'
AT3G23960 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G23960 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23960 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23960 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G23960 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G23960 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23950 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.83333 x 10-1 9 14 39.13% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23950 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.2635'
Avg. expression score in LCM sample: '8.18674'
Tissue used: 'full endosperm'
AT3G23950 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.41156'
Avg. expression score in LCM sample: '8.18674'
Tissue used: 'pure endosperm, no chalazal'
AT3G23950 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 12 0 100.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23950 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23950 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 2 0 0 33.33% 3 0 TAIR8 Avg. embryo expression (dissected): '1.84918'
Avg. embryo expression (LCM): '0'
AT3G23940 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2869.41'
Avg. embryo expression (LCM): '2797.61'
AT3G23940 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23940 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23940 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '987.657'
Avg. expression score in LCM sample: '305.467'
Tissue used: 'pure endosperm, no chalazal'
AT3G23940 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '799.471'
Avg. expression score in LCM sample: '305.467'
Tissue used: 'full endosperm'
AT3G23940 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23930 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23930 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '4.90587'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G23930 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.63321'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G23930 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23930 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23930 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.09847'
Avg. embryo expression (LCM): '0'
AT3G23920 BAM1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.40327 x 10-1 26 24 4 18 52.00% 81.82% 50 22 TAIR8 Avg. embryo expression (dissected): '548.93'
Avg. embryo expression (LCM): '115.137'
AT3G23920 BAM1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.73521 x 10-1 90 27 76.92% 117 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23920 BAM1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.1 x 10-6 126 13 90.65% 139 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23920 BAM1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.90507 x 10-1 104 54 83 208 65.82% 71.48% 158 291 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000994'
Avg. expression score for this sample: '2438.05'
Avg. expression score in LCM sample: '199.701'
Tissue used: 'pure endosperm, no chalazal'
AT3G23920 BAM1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.5 x 10-5 169 58 34 168 74.45% 83.17% 227 202 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000994'
Avg. expression score for this sample: '2520.19'
Avg. expression score in LCM sample: '199.701'
Tissue used: 'full endosperm'
AT3G23920 BAM1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.5922 x 10-2 158 34 82.29% 192 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23910 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23910 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '49.7426'
Avg. expression score in LCM sample: '15.4769'
Tissue used: 'full endosperm'
AT3G23910 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '21.9616'
Avg. expression score in LCM sample: '15.4769'
Tissue used: 'pure endosperm, no chalazal'
AT3G23910 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23910 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23910 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '28.2822'
Avg. embryo expression (LCM): '35.5533'
AT3G23900 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.01509 x 10-1 67 76 28 16 46.85% 36.36% 143 44 TAIR8 Avg. embryo expression (dissected): '596.795'
Avg. embryo expression (LCM): '475.229'
AT3G23900 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.63753 x 10-1 49 16 75.38% 65 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23900 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.71073 x 10-1 323 104 75.64% 427 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23900 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.28743 x 10-1 58 26 36 74 69.05% 67.27% 84 110 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.075491'
Avg. expression score for this sample: '786.037'
Avg. expression score in LCM sample: '272.911'
Tissue used: 'pure endosperm, no chalazal'
AT3G23900 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.9834 x 10-2 102 50 53 183 67.11% 77.54% 152 236 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.075491'
Avg. expression score for this sample: '722.341'
Avg. expression score in LCM sample: '272.911'
Tissue used: 'full endosperm'
AT3G23900 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.096 x 10-3 337 85 79.86% 422 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23890 TOPII endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.48902 x 10-1 25 8 75.76% 33 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23890 TOPII endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.89533 x 10-1 27 14 26 61 65.85% 70.11% 41 87 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.78964'
Avg. expression score for this sample: '259.135'
Avg. expression score in LCM sample: '265.871'
Tissue used: 'full endosperm'
AT3G23890 TOPII endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.7392 x 10-1 59 30 28 36 66.29% 56.25% 89 64 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.78964'
Avg. expression score for this sample: '286.168'
Avg. expression score in LCM sample: '265.871'
Tissue used: 'pure endosperm, no chalazal'
AT3G23890 TOPII endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.11431 x 10-1 14 10 58.33% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23890 TOPII endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.58995 x 10-1 4 4 50.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23890 TOPII embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.88832 x 10-1 110 116 48 27 48.67% 36.00% 226 75 TAIR8 Avg. embryo expression (dissected): '825.067'
Avg. embryo expression (LCM): '709.233'
AT3G23880 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.36113'
Avg. embryo expression (LCM): '3.20244'
AT3G23880 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23880 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23880 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G23880 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.449817'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G23880 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23870 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.8 x 10-8 59 1 98.33% 60 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23870 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 16 15 7 27 51.61% 79.41% 31 34 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.644877'
Avg. expression score for this sample: '18.8342'
Avg. expression score in LCM sample: '15.227'
Tissue used: 'full endosperm'
AT3G23870 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.06419 x 10-1 4 4 9 10 50.00% 52.63% 8 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.644877'
Avg. expression score for this sample: '22.82'
Avg. expression score in LCM sample: '15.227'
Tissue used: 'pure endosperm, no chalazal'
AT3G23870 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.3745 x 10-2 9 1 90.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23870 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.9956 x 10-2 4 9 30.77% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23870 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '1.5274'
Avg. embryo expression (LCM): '0'
AT3G23860 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G23860 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23860 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 10 6 62.50% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23860 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.85271'
Avg. expression score in LCM sample: '2.1312'
Tissue used: 'pure endosperm, no chalazal'
AT3G23860 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.522914'
Avg. expression score in LCM sample: '2.1312'
Tissue used: 'full endosperm'
AT3G23860 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23850 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G23850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G23850 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23850 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23850 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G23840 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.6835 x 10-2 29 5 5 1 85.29% 16.67% 34 6 TAIR8 Avg. embryo expression (dissected): '11.4578'
Avg. embryo expression (LCM): '15.6605'
AT3G23840 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 18 5 78.26% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23840 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.8 x 10-5 119 7 94.44% 126 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.04764 x 10-1 17 0 7 8 100.00% 53.33% 17 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.019099'
Avg. expression score for this sample: '8.22217'
Avg. expression score in LCM sample: '16.3'
Tissue used: 'pure endosperm, no chalazal'
AT3G23840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.9422 x 10-2 50 11 22 68 81.97% 75.56% 61 90 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.019099'
Avg. expression score for this sample: '21.0622'
Avg. expression score in LCM sample: '16.3'
Tissue used: 'full endosperm'
AT3G23840 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.0 x 10-8 85 0 100.00% 85 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23830 GRP4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23830 GRP4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '213.601'
Avg. expression score in LCM sample: '11.1998'
Tissue used: 'full endosperm'
AT3G23830 GRP4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '168.424'
Avg. expression score in LCM sample: '11.1998'
Tissue used: 'pure endosperm, no chalazal'
AT3G23830 GRP4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23830 GRP4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G23830 GRP4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '671.586'
Avg. embryo expression (LCM): '1543.1'