| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT3G24130 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.169567' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT3G24130 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G24120 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.55205 x 10-1 | 13 | 17 | 4 | 35 | 43.33% | 89.74% | 30 | 39 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.06427' Avg. expression score for this sample: '74.0572' Avg. expression score in LCM sample: '34.6136' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G24120 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.8767 x 10-2 | 5 | 15 | 2 | 71 | 25.00% | 97.26% | 20 | 73 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.06427' Avg. expression score for this sample: '142.183' Avg. expression score in LCM sample: '34.6136' Tissue used: 'full endosperm' |
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| AT3G24120 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.1538 x 10-2 | 9 | 10 | 47.37% | 19 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G24120 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.2274 x 10-2 | 14 | 0 | 100.00% | 14 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G24120 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.4185 x 10-2 | 4 | 32 | 4 | 11 | 11.11% | 73.33% | 36 | 15 | TAIR8 |
Avg. embryo expression (dissected): '83.5789' Avg. embryo expression (LCM): '171.776' |
||||
| AT3G24120 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.5 x 10-6 | 57 | 0 | 100.00% | 57 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G24110 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G24110 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 4 | 2 | 1 | 1 | 66.67% | 50.00% | 6 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '6.65617' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||
| AT3G24110 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '3.02603' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G24110 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 2 | 6 | 0 | 3 | 25.00% | 100.00% | 8 | 3 | TAIR8 |
Avg. embryo expression (dissected): '12.6748' Avg. embryo expression (LCM): '0' |
||||
| AT3G24110 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G24110 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G24100 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.3 x 10-8 | 226 | 41 | 84.64% | 267 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G24100 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.7 x 10-5 | 127 | 25 | 83.55% | 152 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G24100 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.10096 x 10-1 | 138 | 180 | 25 | 38 | 43.40% | 60.32% | 318 | 63 | TAIR8 |
Avg. embryo expression (dissected): '979.169' Avg. embryo expression (LCM): '1087.36' |
||||
| AT3G24100 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.44871 x 10-1 | 331 | 139 | 70.43% | 470 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G24100 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 9.60794 x 10-1 | 278 | 167 | 142 | 345 | 62.47% | 70.84% | 445 | 487 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.120073' Avg. expression score for this sample: '1736.2' Avg. expression score in LCM sample: '582.375' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT3G24100 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.7608 x 10-2 | 373 | 183 | 187 | 508 | 67.09% | 73.09% | 556 | 695 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.120073' Avg. expression score for this sample: '1618.37' Avg. expression score in LCM sample: '582.375' Tissue used: 'full endosperm' |
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| AT3G24093 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.778707' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT3G24093 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT3G24093 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.253777' Avg. embryo expression (LCM): '0' |
||||||
| AT3G24093 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G24093 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 8 | 7 | 53.33% | 15 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G24093 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 4 | 2 | 66.67% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G24090 | GFAT | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G24090 | GFAT | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '8.19631' Avg. expression score in LCM sample: '4.17421' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT3G24090 | GFAT | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '8.46028' Avg. expression score in LCM sample: '4.17421' Tissue used: 'full endosperm' |
||||||
| AT3G24090 | GFAT | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G24090 | GFAT | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G24090 | GFAT | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '34.3772' Avg. embryo expression (LCM): '55.8103' |
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| AT3G24080 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.0 x 10-12 | 2501 | 1489 | 812 | 520 | 62.68% | 39.04% | 3990 | 1332 | TAIR8 |
Avg. embryo expression (dissected): '13876.4' Avg. embryo expression (LCM): '7974.66' |
||||
| AT3G24080 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.7 x 10-12 | 413 | 321 | 56.27% | 734 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G24080 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 9483 | 1072 | 89.84% | 10555 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G24080 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 x 10-30 | 3937 | 2550 | 60.69% | 6487 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G24080 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.1 x 10-5 | 5217 | 1229 | 3033 | 4332 | 80.93% | 58.82% | 6446 | 7365 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000058' Avg. expression score for this sample: '10369.2' Avg. expression score in LCM sample: '977.823' Tissue used: 'full endosperm' |
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| AT3G24080 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.58193 x 10-1 | 2123 | 588 | 929 | 971 | 78.31% | 51.11% | 2711 | 1900 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000058' Avg. expression score for this sample: '8258' Avg. expression score in LCM sample: '977.823' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G24070 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.46541 x 10-1 | 193 | 37 | 86 | 75 | 83.91% | 46.58% | 230 | 161 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1.3e-08' Avg. expression score for this sample: '389.086' Avg. expression score in LCM sample: '262.461' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G24070 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.1 x 10-10 | 448 | 98 | 117 | 375 | 82.05% | 76.22% | 546 | 492 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1.3e-08' Avg. expression score for this sample: '474.886' Avg. expression score in LCM sample: '262.461' Tissue used: 'full endosperm' |
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| AT3G24070 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.2 x 10-20 | 972 | 104 | 90.33% | 1076 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G24070 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 9.02854 x 10-1 | 75 | 24 | 75.76% | 99 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G24070 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.88765 x 10-1 | 111 | 50 | 49 | 18 | 68.94% | 26.87% | 161 | 67 | TAIR8 |
Avg. embryo expression (dissected): '352.722' Avg. embryo expression (LCM): '194.105' |
||||
| AT3G24070 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.365 x 10-2 | 309 | 72 | 81.10% | 381 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G24068 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G24068 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '10.1924' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT3G24068 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '6.37801' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G24068 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT3G24068 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G24068 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G24065 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 368 | 27 | 93.16% | 395 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G24065 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G24065 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT3G24065 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.222 x 10-3 | 35 | 163 | 17.68% | 198 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G24065 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G24065 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 4 | 0 | 0 | 0 | 100.00% | 4 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '3.52242' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT3G24060 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '1.1941' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT3G24060 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G24060 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT3G24060 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G24060 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G24060 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G24050 | GATA1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 4 | 1 | 80.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G24050 | GATA1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 2 | 1 | 1 | 2 | 66.67% | 66.67% | 3 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.31817' Avg. expression score for this sample: '355.64' Avg. expression score in LCM sample: '163.176' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G24050 | GATA1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.99472 x 10-1 | 28 | 10 | 10 | 30 | 73.68% | 75.00% | 38 | 40 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.31817' Avg. expression score for this sample: '185.84' Avg. expression score in LCM sample: '163.176' Tissue used: 'full endosperm' |
||||
| AT3G24050 | GATA1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.43256 x 10-1 | 8 | 1 | 88.89% | 9 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G24050 | GATA1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.5513 x 10-2 | 0 | 2 | 0.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G24050 | GATA1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.28571 x 10-1 | 0 | 2 | 1 | 0 | 0.00% | 0.00% | 2 | 1 | TAIR8 |
Avg. embryo expression (dissected): '296.689' Avg. embryo expression (LCM): '136.348' |
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| AT3G24040 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 6 | 8 | 2 | 3 | 42.86% | 60.00% | 14 | 5 | TAIR8 |
Avg. embryo expression (dissected): '381.08' Avg. embryo expression (LCM): '216.108' |
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| AT3G24040 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G24040 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.5868 x 10-2 | 21 | 0 | 100.00% | 21 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G24040 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.27693 x 10-1 | 7 | 0 | 100.00% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G24040 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.9387 x 10-2 | 11 | 2 | 1 | 13 | 84.62% | 92.86% | 13 | 14 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.250627' Avg. expression score for this sample: '280.643' Avg. expression score in LCM sample: '79.6186' Tissue used: 'full endosperm' |
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| AT3G24040 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 7 | 7 | 0 | 7 | 50.00% | 100.00% | 14 | 7 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.250627' Avg. expression score for this sample: '256.55' Avg. expression score in LCM sample: '79.6186' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G24030 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 4 | 1 | 2 | 5 | 80.00% | 71.43% | 5 | 7 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.550638' Avg. expression score for this sample: '226.993' Avg. expression score in LCM sample: '60.0116' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G24030 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.35098 x 10-1 | 46 | 19 | 8 | 20 | 70.77% | 71.43% | 65 | 28 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.550638' Avg. expression score for this sample: '150.469' Avg. expression score in LCM sample: '60.0116' Tissue used: 'full endosperm' |
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| AT3G24030 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.8 x 10-5 | 42 | 0 | 100.00% | 42 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G24030 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 1 | 75.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G24030 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.82051 x 10-1 | 1 | 5 | 1 | 0 | 16.67% | 0.00% | 6 | 1 | TAIR8 |
Avg. embryo expression (dissected): '160.332' Avg. embryo expression (LCM): '105.831' |
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| AT3G24030 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.97129 x 10-1 | 16 | 3 | 84.21% | 19 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G24020 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G24020 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '17.3171' Avg. expression score in LCM sample: '17.6081' Tissue used: 'full endosperm' |
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| AT3G24020 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '17.4514' Avg. expression score in LCM sample: '17.6081' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G24020 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '18.8214' Avg. embryo expression (LCM): '1.36888' |
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| AT3G24020 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G24020 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G24010 | ING1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.7322 | 81 | 36 | 69.23% | 117 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G24010 | ING1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 9.2202 x 10-2 | 33 | 6 | 84.62% | 39 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G24010 | ING1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.52644 x 10-1 | 49 | 65 | 12 | 16 | 42.98% | 57.14% | 114 | 28 | TAIR8 |
Avg. embryo expression (dissected): '371.564' Avg. embryo expression (LCM): '151.381' |
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| AT3G24010 | ING1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.80336 x 10-1 | 122 | 37 | 76.73% | 159 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G24010 | ING1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.23725 x 10-1 | 48 | 34 | 17 | 63 | 58.54% | 78.75% | 82 | 80 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.169754' Avg. expression score for this sample: '260.673' Avg. expression score in LCM sample: '55.7786' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G24010 | ING1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.44837 x 10-1 | 70 | 36 | 42 | 137 | 66.04% | 76.54% | 106 | 179 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.169754' Avg. expression score for this sample: '271.286' Avg. expression score in LCM sample: '55.7786' Tissue used: 'full endosperm' |
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| AT3G24000 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.88168 x 10-1 | 7 | 4 | 2 | 0 | 63.64% | 0.00% | 11 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.688168' Avg. expression score for this sample: '25.9957' Avg. expression score in LCM sample: '.778989' Tissue used: 'full endosperm' |
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| AT3G24000 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.688168' Avg. expression score for this sample: '8.69497' Avg. expression score in LCM sample: '.778989' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G24000 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 5 | 3 | 1 | 1 | 62.50% | 50.00% | 8 | 2 | TAIR8 |
Avg. embryo expression (dissected): '41.3485' Avg. embryo expression (LCM): '19.1644' |
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| AT3G24000 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.85714 x 10-1 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G24000 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 3 | 40.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G24000 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 1 | 50.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G23990 | HSP60 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G23990 | HSP60 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 2 | 0 | 1 | 0 | 100.00% | 0.00% | 2 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '447.417' Avg. expression score in LCM sample: '69.5652' Tissue used: 'pure endosperm, no chalazal' |